RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 TMTC3Q6ZXV5 915 aa20.35■□□□□ 0.85
DDX49-213ENST00000602113 NBPF11Q86T75 865 aa20.35■□□□□ 0.85
DDX49-213ENST00000602113 USP48Q86UV5 1035 aa20.35■□□□□ 0.85
DDX49-213ENST00000602113 ZNF341Q9BYN7 854 aa20.35■□□□□ 0.85
DDX49-213ENST00000602113 MAD2L2Q9UI95 211 aa20.35■□□□□ 0.85
DDX49-213ENST00000602113 ZNF112Q9UJU3 913 aa20.35■□□□□ 0.85
DDX49-213ENST00000602113 FZD1Q9UP38 647 aa20.35■□□□□ 0.85
DDX49-213ENST00000602113 USP17L5A8MUK1 530 aa20.34■□□□□ 0.85
DDX49-213ENST00000602113 POTEIP0CG38 1075 aa20.34■□□□□ 0.85
DDX49-213ENST00000602113 POTEJP0CG39 1038 aa20.34■□□□□ 0.85
DDX49-213ENST00000602113 STAG2Q8N3U4 1231 aa20.34■□□□□ 0.85
DDX49-213ENST00000602113 RRAGCQ9HB90 399 aa20.34■□□□□ 0.85
DDX49-213ENST00000602113 ORC3Q9UBD5 711 aaPredicted RBP20.34■□□□□ 0.85
DDX49-213ENST00000602113 CTNND1O60716 968 aaKnown RBP20.33■□□□□ 0.85
DDX49-213ENST00000602113 INPP5BP32019 993 aa20.33■□□□□ 0.85
DDX49-213ENST00000602113 KIF5BP33176 963 aa20.33■□□□□ 0.85
DDX49-213ENST00000602113 NUCB2P80303 420 aa20.33■□□□□ 0.85
DDX49-213ENST00000602113 LARP1BQ659C4 914 aaKnown RBP20.33■□□□□ 0.85
DDX49-213ENST00000602113 CCDC82Q8N4S0 544 aa20.33■□□□□ 0.85
DDX49-213ENST00000602113 SRBD1Q8N5C6 995 aaKnown RBP20.33■□□□□ 0.85
DDX49-213ENST00000602113 A0A1W2PRG0 241 aa20.32■□□□□ 0.84
DDX49-213ENST00000602113 PALM3A6NDB9 673 aaPredicted RBP20.32■□□□□ 0.84
DDX49-213ENST00000602113 UBE2Q2LH0YL09 131 aa20.32■□□□□ 0.84
DDX49-213ENST00000602113 FMNL1O95466 1100 aaPredicted RBP20.32■□□□□ 0.84
DDX49-213ENST00000602113 BRD1O95696 1058 aa20.32■□□□□ 0.84
DDX49-213ENST00000602113 ASNSP08243 561 aa20.32■□□□□ 0.84
DDX49-213ENST00000602113 SNHG28P0DPA3 235 aa20.32■□□□□ 0.84
DDX49-213ENST00000602113 PDHBP11177 359 aa20.32■□□□□ 0.84
DDX49-213ENST00000602113 USP17L2Q6R6M4 530 aa20.32■□□□□ 0.84
DDX49-213ENST00000602113 FAM184AQ8NB25 1140 aa20.32■□□□□ 0.84
DDX49-213ENST00000602113 SLC26A6Q9BXS9 759 aa20.32■□□□□ 0.84
DDX49-213ENST00000602113 STK36Q9NRP7 1315 aa20.32■□□□□ 0.84
DDX49-213ENST00000602113 STX6O43752 255 aa20.32■□□□□ 0.84
DDX49-213ENST00000602113 GOLGA8HP0CJ92 632 aa20.32■□□□□ 0.84
DDX49-213ENST00000602113 VEGFAP15692 232 aaPredicted RBP20.32■□□□□ 0.84
DDX49-213ENST00000602113 SSRP1Q08945 709 aaKnown RBP20.32■□□□□ 0.84
DDX49-213ENST00000602113 SLC35G1Q2M3R5 365 aa20.32■□□□□ 0.84
DDX49-213ENST00000602113 CCDC84Q86UT8 332 aaPredicted RBP20.32■□□□□ 0.84
DDX49-213ENST00000602113 ACER1Q8TDN7 264 aa20.32■□□□□ 0.84
DDX49-213ENST00000602113 GLIS2Q9BZE0 524 aaPredicted RBP20.32■□□□□ 0.84
DDX49-213ENST00000602113 PARP1P09874 1014 aaKnown RBP20.31■□□□□ 0.84
DDX49-213ENST00000602113 PDCP20941 246 aa20.31■□□□□ 0.84
DDX49-213ENST00000602113 ECE1P42892 770 aa20.31■□□□□ 0.84
DDX49-213ENST00000602113 CDCA5Q96FF9 252 aa20.31■□□□□ 0.84
DDX49-213ENST00000602113 AIFM3Q96NN9 605 aa20.31■□□□□ 0.84
DDX49-213ENST00000602113 WRNIP1Q96S55 665 aa20.31■□□□□ 0.84
DDX49-213ENST00000602113 MTMR6Q9Y217 621 aa20.31■□□□□ 0.84
DDX49-213ENST00000602113 MYH4Q9Y623 1939 aa20.31■□□□□ 0.84
DDX49-213ENST00000602113 CNTNAP5Q8WYK1 1306 aa20.3■□□□□ 0.84
DDX49-213ENST00000602113 USP2O75604 605 aaPredicted RBP20.3■□□□□ 0.84
DDX49-213ENST00000602113 FOXD4L5Q5VV16 416 aaPredicted RBP20.3■□□□□ 0.84
DDX49-213ENST00000602113 FOXD4L4Q8WXT5 416 aaPredicted RBP20.3■□□□□ 0.84
DDX49-213ENST00000602113 ZKSCAN4Q969J2 545 aaPredicted RBP20.3■□□□□ 0.84
DDX49-213ENST00000602113 KLRG1Q96E93 195 aa20.3■□□□□ 0.84
DDX49-213ENST00000602113 GINM1Q9NU53 330 aa20.3■□□□□ 0.84
DDX49-213ENST00000602113 CLEC11AQ9Y240 323 aa20.3■□□□□ 0.84
DDX49-213ENST00000602113 GNAQP50148 359 aa20.29■□□□□ 0.84
DDX49-213ENST00000602113 FOSBP53539 338 aa20.29■□□□□ 0.84
DDX49-213ENST00000602113 PRKG1Q13976 671 aa20.29■□□□□ 0.84
DDX49-213ENST00000602113 CDC37L1Q7L3B6 337 aa20.29■□□□□ 0.84
DDX49-213ENST00000602113 GMCL1P1Q8NEA9 526 aa20.29■□□□□ 0.84
DDX49-213ENST00000602113 ARHGEF10LQ9HCE6 1279 aa20.29■□□□□ 0.84
DDX49-213ENST00000602113 NMRK2Q9NPI5 230 aa20.29■□□□□ 0.84
DDX49-213ENST00000602113 KIF3AQ9Y496 699 aa20.29■□□□□ 0.84
DDX49-213ENST00000602113 FRMPD2Q68DX3 1309 aaPredicted RBP20.29■□□□□ 0.84
DDX49-213ENST00000602113 KLRF2D3W0D1 207 aa20.29■□□□□ 0.84
DDX49-213ENST00000602113 F5H6K3 240 aa20.29■□□□□ 0.84
DDX49-213ENST00000602113 KLRC3Q07444 240 aa20.29■□□□□ 0.84
DDX49-213ENST00000602113 ZNF543Q08ER8 600 aa20.29■□□□□ 0.84
DDX49-213ENST00000602113 SLFN13Q68D06 897 aa20.29■□□□□ 0.84
DDX49-213ENST00000602113 TRIM22Q8IYM9 498 aa20.29■□□□□ 0.84
DDX49-213ENST00000602113 SCYL3Q8IZE3 742 aa20.29■□□□□ 0.84
DDX49-213ENST00000602113 TNPO1Q92973 898 aaKnown RBP20.29■□□□□ 0.84
DDX49-213ENST00000602113 RNF26Q9BY78 433 aaPredicted RBP20.29■□□□□ 0.84
DDX49-213ENST00000602113 CPVLQ9H3G5 476 aa20.29■□□□□ 0.84
DDX49-213ENST00000602113 SYNPO2Q9UMS6 1093 aa20.29■□□□□ 0.84
DDX49-213ENST00000602113 TMX2Q9Y320 296 aa20.29■□□□□ 0.84
DDX49-213ENST00000602113 V9GY48 417 aaPredicted RBP20.29■□□□□ 0.84
DDX49-213ENST00000602113 ATAD5Q96QE3 1844 aa20.28■□□□□ 0.84
DDX49-213ENST00000602113 WDR33Q9C0J8 1336 aaKnown RBP20.28■□□□□ 0.84
DDX49-213ENST00000602113 hCG_1642624A0A1W2PR95 340 aa20.28■□□□□ 0.84
DDX49-213ENST00000602113 VPS37CA5D8V6 355 aaPredicted RBP20.28■□□□□ 0.84
DDX49-213ENST00000602113 PRPF3O43395 683 aaKnown RBP20.28■□□□□ 0.84
DDX49-213ENST00000602113 NDUFB10O96000 172 aa20.28■□□□□ 0.84
DDX49-213ENST00000602113 ZSCAN22P10073 491 aaPredicted RBP20.28■□□□□ 0.84
DDX49-213ENST00000602113 ASPRV1Q53RT3 343 aa20.28■□□□□ 0.84
DDX49-213ENST00000602113 MAP1SQ66K74 1059 aaPredicted RBP20.28■□□□□ 0.84
DDX49-213ENST00000602113 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.28■□□□□ 0.84
DDX49-213ENST00000602113 ALG1Q9BT22 464 aa20.28■□□□□ 0.84
DDX49-213ENST00000602113 GJB4Q9NTQ9 266 aa20.28■□□□□ 0.84
DDX49-213ENST00000602113 CYTH3O43739 400 aa20.27■□□□□ 0.84
DDX49-213ENST00000602113 PKN1Q16512 942 aa20.27■□□□□ 0.84
DDX49-213ENST00000602113 KIAA1755Q5JYT7 1200 aa20.27■□□□□ 0.84
DDX49-213ENST00000602113 ZNF526Q8TF50 670 aaPredicted RBP20.27■□□□□ 0.84
DDX49-213ENST00000602113 DCAF4Q8WV16 495 aa20.27■□□□□ 0.84
DDX49-213ENST00000602113 LZTS2Q9BRK4 669 aa20.27■□□□□ 0.84
DDX49-213ENST00000602113 GPCPD1Q9NPB8 672 aa20.27■□□□□ 0.84
DDX49-213ENST00000602113 RAD21O60216 631 aa20.26■□□□□ 0.83
DDX49-213ENST00000602113 DEXIO95424 95 aa20.26■□□□□ 0.83
DDX49-213ENST00000602113 OTUD7BQ6GQQ9 843 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms