RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 ZMYM1Q5SVZ6 1142 aa17.11■□□□□ 0.33
IRF3-224ENST00000599680 WDR78Q5VTH9 848 aa17.11■□□□□ 0.33
IRF3-224ENST00000599680 LPAR1Q92633 364 aa17.11■□□□□ 0.33
IRF3-224ENST00000599680 SEC62Q99442 399 aaKnown RBP17.11■□□□□ 0.33
IRF3-224ENST00000599680 NUDT12Q9BQG2 462 aa17.11■□□□□ 0.33
IRF3-224ENST00000599680 NAPBQ9H115 298 aa17.11■□□□□ 0.33
IRF3-224ENST00000599680 KANSL2Q9H9L4 492 aa17.11■□□□□ 0.33
IRF3-224ENST00000599680 EPB41L4AQ9HCS5 686 aaPredicted RBP17.11■□□□□ 0.33
IRF3-224ENST00000599680 TMX2Q9Y320 296 aa17.11■□□□□ 0.33
IRF3-224ENST00000599680 ROBO3Q96MS0 1386 aa17.11■□□□□ 0.33
IRF3-224ENST00000599680 ZNFX1Q9P2E3 1918 aaKnown RBP17.11■□□□□ 0.33
IRF3-224ENST00000599680 TRIM6-TRIM34B2RNG4 842 aa17.1■□□□□ 0.33
IRF3-224ENST00000599680 SLC3A2P08195 630 aaKnown RBP17.1■□□□□ 0.33
IRF3-224ENST00000599680 SMC5Q8IY18 1101 aa17.1■□□□□ 0.33
IRF3-224ENST00000599680 IFNL3Q8IZI9 196 aa17.1■□□□□ 0.33
IRF3-224ENST00000599680 SOCS4Q8WXH5 440 aa17.1■□□□□ 0.33
IRF3-224ENST00000599680 GOPCQ9HD26 462 aa17.1■□□□□ 0.33
IRF3-224ENST00000599680 HOXC10Q9NYD6 342 aa17.1■□□□□ 0.33
IRF3-224ENST00000599680 SPDYE16A6NNV3 312 aaPredicted RBP17.09■□□□□ 0.33
IRF3-224ENST00000599680 HMGCRP04035 888 aa17.09■□□□□ 0.33
IRF3-224ENST00000599680 GJB1P08034 283 aa17.09■□□□□ 0.33
IRF3-224ENST00000599680 EEF2P13639 858 aaKnown RBP17.09■□□□□ 0.33
IRF3-224ENST00000599680 COG2Q14746 738 aa17.09■□□□□ 0.33
IRF3-224ENST00000599680 Q3C1V9 767 aa17.09■□□□□ 0.33
IRF3-224ENST00000599680 SAMD1Q6SPF0 538 aaPredicted RBP17.09■□□□□ 0.33
IRF3-224ENST00000599680 LBX2Q6XYB7 198 aa17.09■□□□□ 0.33
IRF3-224ENST00000599680 PLEKHH3Q7Z736 793 aa17.09■□□□□ 0.33
IRF3-224ENST00000599680 ZNF444Q8N0Y2 327 aaPredicted RBP17.09■□□□□ 0.33
IRF3-224ENST00000599680 SPICE1Q8N0Z3 855 aa17.09■□□□□ 0.33
IRF3-224ENST00000599680 UNC93B1Q9H1C4 597 aa17.09■□□□□ 0.33
IRF3-224ENST00000599680 PORCNQ9H237 461 aa17.09■□□□□ 0.33
IRF3-224ENST00000599680 VCPKMTQ9H867 229 aa17.09■□□□□ 0.33
IRF3-224ENST00000599680 IVNS1ABPQ9Y6Y0 642 aa17.09■□□□□ 0.33
IRF3-224ENST00000599680 WDR46O15213 610 aaKnown RBP17.08■□□□□ 0.32
IRF3-224ENST00000599680 FLOT1O75955 427 aa17.08■□□□□ 0.32
IRF3-224ENST00000599680 CYP2B6P20813 491 aa17.08■□□□□ 0.32
IRF3-224ENST00000599680 RASA1P20936 1047 aa17.08■□□□□ 0.32
IRF3-224ENST00000599680 PDE4BQ07343 736 aa17.08■□□□□ 0.32
IRF3-224ENST00000599680 GPR142Q7Z601 462 aa17.08■□□□□ 0.32
IRF3-224ENST00000599680 CHD1LQ86WJ1 897 aa17.08■□□□□ 0.32
IRF3-224ENST00000599680 RILPL2Q969X0 211 aa17.08■□□□□ 0.32
IRF3-224ENST00000599680 GJD2Q9UKL4 321 aa17.08■□□□□ 0.32
IRF3-224ENST00000599680 CNMDO75829 334 aa17.07■□□□□ 0.32
IRF3-224ENST00000599680 IGHDP01880 384 aa17.07■□□□□ 0.32
IRF3-224ENST00000599680 RGS2P41220 211 aa17.07■□□□□ 0.32
IRF3-224ENST00000599680 GJA8P48165 433 aa17.07■□□□□ 0.32
IRF3-224ENST00000599680 PRPF38BQ5VTL8 546 aaKnown RBP17.07■□□□□ 0.32
IRF3-224ENST00000599680 CCDC129Q6ZRS4 1044 aa17.07■□□□□ 0.32
IRF3-224ENST00000599680 TRMT44Q8IYL2 757 aaKnown RBP17.07■□□□□ 0.32
IRF3-224ENST00000599680 PLXNA1Q9UIW2 1896 aa17.07■□□□□ 0.32
IRF3-224ENST00000599680 ZNF236Q9UL36 1845 aa17.07■□□□□ 0.32
IRF3-224ENST00000599680 FRMPD3Q5JV73 1810 aa17.06■□□□□ 0.32
IRF3-224ENST00000599680 PRDM1O75626 825 aa17.06■□□□□ 0.32
IRF3-224ENST00000599680 ZKSCAN1P17029 563 aaPredicted RBP17.06■□□□□ 0.32
IRF3-224ENST00000599680 NUCB1Q02818 461 aa17.06■□□□□ 0.32
IRF3-224ENST00000599680 PLS1Q14651 629 aa17.06■□□□□ 0.32
IRF3-224ENST00000599680 KIAA1755Q5JYT7 1200 aa17.06■□□□□ 0.32
IRF3-224ENST00000599680 SIAH1Q8IUQ4 282 aa17.06■□□□□ 0.32
IRF3-224ENST00000599680 MB21D1Q8N884 522 aa17.06■□□□□ 0.32
IRF3-224ENST00000599680 U2AF1L4Q8WU68 220 aaKnown RBP17.06■□□□□ 0.32
IRF3-224ENST00000599680 HELLSQ9NRZ9 838 aa17.06■□□□□ 0.32
IRF3-224ENST00000599680 BTBD7Q9P203 1132 aa17.06■□□□□ 0.32
IRF3-224ENST00000599680 TFRCP02786 760 aaKnown RBP17.05■□□□□ 0.32
IRF3-224ENST00000599680 TSPY3P0CV98 308 aa17.05■□□□□ 0.32
IRF3-224ENST00000599680 TSPY8P0CW00 308 aa17.05■□□□□ 0.32
IRF3-224ENST00000599680 XRCC5P13010 732 aaKnown RBP17.05■□□□□ 0.32
IRF3-224ENST00000599680 DSG3P32926 999 aa17.05■□□□□ 0.32
IRF3-224ENST00000599680 PPARAQ07869 468 aa17.05■□□□□ 0.32
IRF3-224ENST00000599680 POTEEQ6S8J3 1075 aa17.05■□□□□ 0.32
IRF3-224ENST00000599680 TICAM2Q86XR7 235 aa17.05■□□□□ 0.32
IRF3-224ENST00000599680 SHISA4Q96DD7 197 aa17.05■□□□□ 0.32
IRF3-224ENST00000599680 DEFB118Q96PH6 123 aa17.05■□□□□ 0.32
IRF3-224ENST00000599680 APBA2Q99767 749 aa17.05■□□□□ 0.32
IRF3-224ENST00000599680 HMX1Q9NP08 348 aaPredicted RBP17.05■□□□□ 0.32
IRF3-224ENST00000599680 SLC15A5A6NIM6 579 aa17.04■□□□□ 0.32
IRF3-224ENST00000599680 SGPL1O95470 568 aa17.04■□□□□ 0.32
IRF3-224ENST00000599680 CAPN2P17655 700 aa17.04■□□□□ 0.32
IRF3-224ENST00000599680 IRX6P78412 446 aaPredicted RBP17.04■□□□□ 0.32
IRF3-224ENST00000599680 MORN1Q5T089 497 aa17.04■□□□□ 0.32
IRF3-224ENST00000599680 TRIB2Q92519 343 aa17.04■□□□□ 0.32
IRF3-224ENST00000599680 ATG4CQ96DT6 458 aa17.04■□□□□ 0.32
IRF3-224ENST00000599680 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.04■□□□□ 0.326e-7■■□□□ 12.6
IRF3-224ENST00000599680 NYAP2Q9P242 653 aa17.04■□□□□ 0.32
IRF3-224ENST00000599680 LAMA4Q16363 1823 aa17.04■□□□□ 0.32
IRF3-224ENST00000599680 RPTORQ8N122 1335 aa17.03■□□□□ 0.32
IRF3-224ENST00000599680 PTPREP23469 700 aa17.03■□□□□ 0.32
IRF3-224ENST00000599680 MFAP1P55081 439 aaKnown RBP17.03■□□□□ 0.32
IRF3-224ENST00000599680 MAP2K5Q13163 448 aa17.03■□□□□ 0.32
IRF3-224ENST00000599680 MCMDC2Q4G0Z9 681 aa17.03■□□□□ 0.32
IRF3-224ENST00000599680 FAM83BQ5T0W9 1011 aa17.03■□□□□ 0.32
IRF3-224ENST00000599680 PLEKHM2Q8IWE5 1019 aa17.03■□□□□ 0.32
IRF3-224ENST00000599680 FAM227BQ96M60 508 aa17.03■□□□□ 0.32
IRF3-224ENST00000599680 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.03■□□□□ 0.32
IRF3-224ENST00000599680 MOV10L1Q9BXT6 1211 aaKnown RBP17.03■□□□□ 0.32
IRF3-224ENST00000599680 SPATC1LQ9H0A9 340 aa17.03■□□□□ 0.32
IRF3-224ENST00000599680 CLIP2Q9UDT6 1046 aa17.03■□□□□ 0.32
IRF3-224ENST00000599680 BRCA2P51587 3418 aa17.02■□□□□ 0.32
IRF3-224ENST00000599680 A0A0D9SFI3 127 aa17.02■□□□□ 0.32
IRF3-224ENST00000599680 FARP2O94887 1054 aaPredicted RBP17.02■□□□□ 0.32
IRF3-224ENST00000599680 PRKAR2AP13861 404 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms