RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 SAFBQ15424 915 aaKnown RBP eCLIP26.61■■□□□ 1.85
SPTBN4-210ENST00000596900 KLHL40Q2TBA0 621 aa26.61■■□□□ 1.85
SPTBN4-210ENST00000596900 KANSL2Q9H9L4 492 aa26.61■■□□□ 1.85
SPTBN4-210ENST00000596900 MAD2L2Q9UI95 211 aa26.61■■□□□ 1.85
SPTBN4-210ENST00000596900 GNL2Q13823 731 aaKnown RBP26.6■■□□□ 1.85
SPTBN4-210ENST00000596900 ABCB5Q2M3G0 1257 aa26.6■■□□□ 1.85
SPTBN4-210ENST00000596900 KIF4BQ2VIQ3 1234 aa26.6■■□□□ 1.85
SPTBN4-210ENST00000596900 USP48Q86UV5 1035 aa26.6■■□□□ 1.85
SPTBN4-210ENST00000596900 ZNF396Q96N95 335 aaPredicted RBP26.6■■□□□ 1.85
SPTBN4-210ENST00000596900 GDPD2Q9HCC8 539 aa26.6■■□□□ 1.85
SPTBN4-210ENST00000596900 CABP5Q9NP86 173 aa26.6■■□□□ 1.85
SPTBN4-210ENST00000596900 CLIP2Q9UDT6 1046 aa26.6■■□□□ 1.85
SPTBN4-210ENST00000596900 V9GY48 417 aaPredicted RBP26.6■■□□□ 1.85
SPTBN4-210ENST00000596900 MBD3O95983 291 aa26.59■■□□□ 1.85
SPTBN4-210ENST00000596900 GUCY1A2P33402 732 aa26.59■■□□□ 1.85
SPTBN4-210ENST00000596900 FAM173BQ6P4H8 233 aa26.59■■□□□ 1.85
SPTBN4-210ENST00000596900 GJB4Q9NTQ9 266 aa26.59■■□□□ 1.85
SPTBN4-210ENST00000596900 MTMR7Q9Y216 660 aa26.59■■□□□ 1.85
SPTBN4-210ENST00000596900 PALM3A6NDB9 673 aaPredicted RBP26.59■■□□□ 1.85
SPTBN4-210ENST00000596900 TBC1D12O60347 775 aa26.59■■□□□ 1.85
SPTBN4-210ENST00000596900 KIF23Q02241 960 aaPredicted RBP26.59■■□□□ 1.85
SPTBN4-210ENST00000596900 SAMD7Q7Z3H4 446 aa26.58■■□□□ 1.85
SPTBN4-210ENST00000596900 TMEM39BQ9GZU3 492 aa26.58■■□□□ 1.85
SPTBN4-210ENST00000596900 SLURP2P0DP57 97 aa26.57■■□□□ 1.84
SPTBN4-210ENST00000596900 TBC1D10BQ4KMP7 808 aaPredicted RBP26.57■■□□□ 1.84
SPTBN4-210ENST00000596900 LRRC47Q8N1G4 583 aaKnown RBP26.57■■□□□ 1.84
SPTBN4-210ENST00000596900 STAG2Q8N3U4 1231 aa26.57■■□□□ 1.84
SPTBN4-210ENST00000596900 NYAP2Q9P242 653 aa26.57■■□□□ 1.84
SPTBN4-210ENST00000596900 ELP1O95163 1332 aa26.57■■□□□ 1.84
SPTBN4-210ENST00000596900 UBE2Q2LH0YL09 131 aa26.57■■□□□ 1.84
SPTBN4-210ENST00000596900 MMP1P03956 469 aa26.57■■□□□ 1.84
SPTBN4-210ENST00000596900 SMARCA1P28370 1054 aa26.57■■□□□ 1.84
SPTBN4-210ENST00000596900 PKN1Q16512 942 aa26.57■■□□□ 1.84
SPTBN4-210ENST00000596900 ASPRV1Q53RT3 343 aa26.57■■□□□ 1.84
SPTBN4-210ENST00000596900 GPRC5DQ9NZD1 345 aa26.57■■□□□ 1.84
SPTBN4-210ENST00000596900 RNF181Q9P0P0 153 aa26.57■■□□□ 1.84
SPTBN4-210ENST00000596900 KLRF2D3W0D1 207 aa26.56■■□□□ 1.84
SPTBN4-210ENST00000596900 EGFRP00533 1210 aa26.56■■□□□ 1.84
SPTBN4-210ENST00000596900 PDHBP11177 359 aa26.56■■□□□ 1.84
SPTBN4-210ENST00000596900 YBX3P16989 372 aaKnown RBP eCLIP26.56■■□□□ 1.84
SPTBN4-210ENST00000596900 ATP2B2Q01814 1243 aa26.56■■□□□ 1.84
SPTBN4-210ENST00000596900 ICA1Q05084 483 aa26.56■■□□□ 1.84
SPTBN4-210ENST00000596900 SPATA32Q96LK8 384 aa26.56■■□□□ 1.84
SPTBN4-210ENST00000596900 RASA3Q14644 834 aa26.55■■□□□ 1.84
SPTBN4-210ENST00000596900 CLEC10AQ8IUN9 316 aa26.55■■□□□ 1.84
SPTBN4-210ENST00000596900 SPZ1Q9BXG8 430 aa26.55■■□□□ 1.84
SPTBN4-210ENST00000596900 GDF11O95390 407 aa26.55■■□□□ 1.84
SPTBN4-210ENST00000596900 SCG2P13521 617 aa26.55■■□□□ 1.84
SPTBN4-210ENST00000596900 UBE2HP62256 183 aa26.55■■□□□ 1.84
SPTBN4-210ENST00000596900 PFKFB3Q16875 520 aaPredicted RBP26.55■■□□□ 1.84
SPTBN4-210ENST00000596900 MKL1Q969V6 931 aa26.55■■□□□ 1.84
SPTBN4-210ENST00000596900 SNHG28P0DPA3 235 aa26.54■■□□□ 1.84
SPTBN4-210ENST00000596900 U2AF2P26368 475 aaKnown RBP eCLIP26.54■■□□□ 1.84
SPTBN4-210ENST00000596900 USP17L2Q6R6M4 530 aa26.54■■□□□ 1.84
SPTBN4-210ENST00000596900 TFIP11Q9UBB9 837 aaKnown RBP26.54■■□□□ 1.84
SPTBN4-210ENST00000596900 HACL1Q9UJ83 578 aa26.54■■□□□ 1.84
SPTBN4-210ENST00000596900 SEPT2Q15019 361 aa26.53■■□□□ 1.84
SPTBN4-210ENST00000596900 FOXP1Q9H334 677 aaPredicted RBP26.53■■□□□ 1.84
SPTBN4-210ENST00000596900 BRMS1Q9HCU9 246 aa26.53■■□□□ 1.84
SPTBN4-210ENST00000596900 GH2P01242 217 aa26.53■■□□□ 1.84
SPTBN4-210ENST00000596900 GOLGA8HP0CJ92 632 aa26.53■■□□□ 1.84
SPTBN4-210ENST00000596900 EEF2P13639 858 aaKnown RBP26.53■■□□□ 1.84
SPTBN4-210ENST00000596900 GPATCH4Q5T3I0 446 aaKnown RBP26.53■■□□□ 1.84
SPTBN4-210ENST00000596900 MYSM1Q5VVJ2 828 aa26.53■■□□□ 1.84
SPTBN4-210ENST00000596900 APOBEC3FQ8IUX4 373 aaKnown RBP26.53■■□□□ 1.84
SPTBN4-210ENST00000596900 DIS3L2Q8IYB7 885 aaKnown RBP26.53■■□□□ 1.84
SPTBN4-210ENST00000596900 SYNPO2Q9UMS6 1093 aa26.53■■□□□ 1.84
SPTBN4-210ENST00000596900 hCG_1642624A0A1W2PR95 340 aa26.52■■□□□ 1.84
SPTBN4-210ENST00000596900 USP17L5A8MUK1 530 aa26.52■■□□□ 1.84
SPTBN4-210ENST00000596900 KIF28PB7ZC32 967 aa26.52■■□□□ 1.84
SPTBN4-210ENST00000596900 VPS54Q9P1Q0 977 aa26.52■■□□□ 1.84
SPTBN4-210ENST00000596900 PGAP2Q9UHJ9 254 aa26.52■■□□□ 1.84
SPTBN4-210ENST00000596900 KCNJ14Q9UNX9 436 aa26.52■■□□□ 1.84
SPTBN4-210ENST00000596900 MAP3K10Q02779 954 aa26.51■■□□□ 1.83
SPTBN4-210ENST00000596900 FAM177A1Q8N128 213 aaPredicted RBP26.51■■□□□ 1.83
SPTBN4-210ENST00000596900 LEO1Q8WVC0 666 aaPredicted RBP26.51■■□□□ 1.83
SPTBN4-210ENST00000596900 BAZ2BQ9UIF8 2168 aaKnown RBP26.51■■□□□ 1.83
SPTBN4-210ENST00000596900 LMOD1P29536 600 aaPredicted RBP26.51■■□□□ 1.83
SPTBN4-210ENST00000596900 GPT2Q8TD30 523 aa26.51■■□□□ 1.83
SPTBN4-210ENST00000596900 PHF20Q9BVI0 1012 aa26.51■■□□□ 1.83
SPTBN4-210ENST00000596900 SH3GLB2Q9NR46 395 aa26.51■■□□□ 1.83
SPTBN4-210ENST00000596900 NOSTRINQ8IVI9 506 aa26.5■■□□□ 1.83
SPTBN4-210ENST00000596900 RRP36Q96EU6 259 aaKnown RBP26.5■■□□□ 1.83
SPTBN4-210ENST00000596900 USP28Q96RU2 1077 aa26.5■■□□□ 1.83
SPTBN4-210ENST00000596900 SEC63Q9UGP8 760 aaKnown RBP26.5■■□□□ 1.83
SPTBN4-210ENST00000596900 GOLGA6L4A6NEF3 574 aa26.49■■□□□ 1.83
SPTBN4-210ENST00000596900 CYTH3O43739 400 aa26.49■■□□□ 1.83
SPTBN4-210ENST00000596900 ZNF543Q08ER8 600 aa26.49■■□□□ 1.83
SPTBN4-210ENST00000596900 C9orf131Q5VYM1 1079 aa26.49■■□□□ 1.83
SPTBN4-210ENST00000596900 HOOK2Q96ED9 719 aa26.49■■□□□ 1.83
SPTBN4-210ENST00000596900 GADD45BO75293 160 aaPredicted RBP26.49■■□□□ 1.83
SPTBN4-210ENST00000596900 KRT2P35908 639 aa26.49■■□□□ 1.83
SPTBN4-210ENST00000596900 MIGA2Q7L4E1 593 aa26.49■■□□□ 1.83
SPTBN4-210ENST00000596900 RASGRP2Q7LDG7 609 aa26.49■■□□□ 1.83
SPTBN4-210ENST00000596900 CDAN1Q8IWY9 1227 aa26.49■■□□□ 1.83
SPTBN4-210ENST00000596900 CCDC148Q8NFR7 591 aa26.49■■□□□ 1.83
SPTBN4-210ENST00000596900 DCAF4Q8WV16 495 aa26.49■■□□□ 1.83
SPTBN4-210ENST00000596900 PIBF1Q8WXW3 757 aa26.49■■□□□ 1.83
SPTBN4-210ENST00000596900 DEFB129Q9H1M3 183 aa26.49■■□□□ 1.83
SPTBN4-210ENST00000596900 ARHGEF10LQ9HCE6 1279 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms