RNA–Protein interactions for RNA: ENST00000592488.2

AP3D1-212, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 3

Gene AP3D1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-212ENST00000592488 IFNL3Q8IZI9 196 aa20.14■□□□□ 0.81
AP3D1-212ENST00000592488 TANGO6Q9C0B7 1094 aa20.14■□□□□ 0.81
AP3D1-212ENST00000592488 RNF208Q9H0X6 261 aa20.14■□□□□ 0.81
AP3D1-212ENST00000592488 PORCNQ9H237 461 aa20.14■□□□□ 0.81
AP3D1-212ENST00000592488 VCPKMTQ9H867 229 aa20.14■□□□□ 0.81
AP3D1-212ENST00000592488 MKNK2Q9HBH9 465 aa20.14■□□□□ 0.81
AP3D1-212ENST00000592488 CNMDO75829 334 aa20.13■□□□□ 0.81
AP3D1-212ENST00000592488 IGHDP01880 384 aa20.13■□□□□ 0.81
AP3D1-212ENST00000592488 EEF2P13639 858 aaKnown RBP20.13■□□□□ 0.81
AP3D1-212ENST00000592488 CCNA1P78396 465 aa20.13■□□□□ 0.81
AP3D1-212ENST00000592488 ATP2B2Q01814 1243 aa20.13■□□□□ 0.81
AP3D1-212ENST00000592488 CHD1LQ86WJ1 897 aa20.13■□□□□ 0.81
AP3D1-212ENST00000592488 STK11IPQ8N1F8 1099 aa20.13■□□□□ 0.81
AP3D1-212ENST00000592488 NKX2-3Q8TAU0 364 aa20.13■□□□□ 0.81
AP3D1-212ENST00000592488 SOCS4Q8WXH5 440 aa20.13■□□□□ 0.81
AP3D1-212ENST00000592488 ZNF287Q9HBT7 754 aa20.13■□□□□ 0.81
AP3D1-212ENST00000592488 GREB1LQ9C091 1923 aaPredicted RBP20.13■□□□□ 0.81
AP3D1-212ENST00000592488 PLXNB2O15031 1838 aa20.12■□□□□ 0.81
AP3D1-212ENST00000592488 GJB1P08034 283 aa20.12■□□□□ 0.81
AP3D1-212ENST00000592488 NUCB1Q02818 461 aa20.12■□□□□ 0.81
AP3D1-212ENST00000592488 COG2Q14746 738 aa20.12■□□□□ 0.81
AP3D1-212ENST00000592488 KIAA1755Q5JYT7 1200 aa20.12■□□□□ 0.81
AP3D1-212ENST00000592488 SPICE1Q8N0Z3 855 aa20.12■□□□□ 0.81
AP3D1-212ENST00000592488 NUDT12Q9BQG2 462 aa20.12■□□□□ 0.81
AP3D1-212ENST00000592488 NAPBQ9H115 298 aa20.12■□□□□ 0.81
AP3D1-212ENST00000592488 UNC93B1Q9H1C4 597 aa20.12■□□□□ 0.81
AP3D1-212ENST00000592488 CWC22Q9HCG8 908 aaKnown RBP20.12■□□□□ 0.81
AP3D1-212ENST00000592488 HOXC10Q9NYD6 342 aa20.12■□□□□ 0.81
AP3D1-212ENST00000592488 WDR46O15213 610 aaKnown RBP20.11■□□□□ 0.81
AP3D1-212ENST00000592488 HMGCRP04035 888 aa20.11■□□□□ 0.81
AP3D1-212ENST00000592488 GPR142Q7Z601 462 aa20.11■□□□□ 0.81
AP3D1-212ENST00000592488 PLEKHH3Q7Z736 793 aa20.11■□□□□ 0.81
AP3D1-212ENST00000592488 TICAM2Q86XR7 235 aa20.11■□□□□ 0.81
AP3D1-212ENST00000592488 SHISA4Q96DD7 197 aa20.11■□□□□ 0.81
AP3D1-212ENST00000592488 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.11■□□□□ 0.81
AP3D1-212ENST00000592488 BTBD7Q9P203 1132 aa20.11■□□□□ 0.81
AP3D1-212ENST00000592488 CEP290O15078 2479 aa20.1■□□□□ 0.81
AP3D1-212ENST00000592488 GJA8P48165 433 aa20.1■□□□□ 0.81
AP3D1-212ENST00000592488 CCDC129Q6ZRS4 1044 aa20.1■□□□□ 0.81
AP3D1-212ENST00000592488 GOPCQ9HD26 462 aa20.1■□□□□ 0.81
AP3D1-212ENST00000592488 HELLSQ9NRZ9 838 aa20.1■□□□□ 0.81
AP3D1-212ENST00000592488 A0A0G2JMZ2 1700 aa20.1■□□□□ 0.81
AP3D1-212ENST00000592488 RLFQ13129 1914 aa20.1■□□□□ 0.81
AP3D1-212ENST00000592488 PRDM1O75626 825 aa20.09■□□□□ 0.81
AP3D1-212ENST00000592488 FLOT1O75955 427 aa20.09■□□□□ 0.81
AP3D1-212ENST00000592488 SLC3A2P08195 630 aaKnown RBP20.09■□□□□ 0.81
AP3D1-212ENST00000592488 XRCC5P13010 732 aaKnown RBP20.09■□□□□ 0.81
AP3D1-212ENST00000592488 CYP2B6P20813 491 aa20.09■□□□□ 0.81
AP3D1-212ENST00000592488 PRPF38BQ5VTL8 546 aaKnown RBP20.09■□□□□ 0.81
AP3D1-212ENST00000592488 ZNF444Q8N0Y2 327 aaPredicted RBP20.09■□□□□ 0.81
AP3D1-212ENST00000592488 TRIM6-TRIM34B2RNG4 842 aa20.08■□□□□ 0.81
AP3D1-212ENST00000592488 RGS2P41220 211 aa20.08■□□□□ 0.81
AP3D1-212ENST00000592488 PDE4BQ07343 736 aa20.08■□□□□ 0.81
AP3D1-212ENST00000592488 PPARAQ07869 468 aa20.08■□□□□ 0.81
AP3D1-212ENST00000592488 MORN1Q5T089 497 aa20.08■□□□□ 0.81
AP3D1-212ENST00000592488 WDR78Q5VTH9 848 aa20.08■□□□□ 0.81
AP3D1-212ENST00000592488 PLEKHM2Q8IWE5 1019 aa20.08■□□□□ 0.81
AP3D1-212ENST00000592488 MB21D1Q8N884 522 aa20.08■□□□□ 0.81
AP3D1-212ENST00000592488 U2AF1L4Q8WU68 220 aaKnown RBP20.08■□□□□ 0.81
AP3D1-212ENST00000592488 USP6NLQ92738 828 aa20.08■□□□□ 0.81
AP3D1-212ENST00000592488 OSBPL3Q9H4L5 887 aa20.08■□□□□ 0.81
AP3D1-212ENST00000592488 NYAP2Q9P242 653 aa20.08■□□□□ 0.81
AP3D1-212ENST00000592488 FOXP2O15409 715 aa20.07■□□□□ 0.8
AP3D1-212ENST00000592488 RAD21O60216 631 aa20.07■□□□□ 0.8
AP3D1-212ENST00000592488 DSG3P32926 999 aa20.07■□□□□ 0.8
AP3D1-212ENST00000592488 TRMT44Q8IYL2 757 aaKnown RBP20.07■□□□□ 0.8
AP3D1-212ENST00000592488 TRIB2Q92519 343 aa20.07■□□□□ 0.8
AP3D1-212ENST00000592488 FAM227BQ96M60 508 aa20.07■□□□□ 0.8
AP3D1-212ENST00000592488 APBA2Q99767 749 aa20.07■□□□□ 0.8
AP3D1-212ENST00000592488 PAK6Q9NQU5 681 aaPredicted RBP20.07■□□□□ 0.8
AP3D1-212ENST00000592488 IVNS1ABPQ9Y6Y0 642 aa20.07■□□□□ 0.8
AP3D1-212ENST00000592488 IGKV6D-41A0A0C4DH26 115 aa20.06■□□□□ 0.8
AP3D1-212ENST00000592488 A0A0D9SFI3 127 aa20.06■□□□□ 0.8
AP3D1-212ENST00000592488 SGPL1O95470 568 aa20.06■□□□□ 0.8
AP3D1-212ENST00000592488 ZKSCAN1P17029 563 aaPredicted RBP20.06■□□□□ 0.8
AP3D1-212ENST00000592488 MCMDC2Q4G0Z9 681 aa20.06■□□□□ 0.8
AP3D1-212ENST00000592488 RILPL2Q969X0 211 aa20.06■□□□□ 0.8
AP3D1-212ENST00000592488 ATG4CQ96DT6 458 aa20.06■□□□□ 0.8
AP3D1-212ENST00000592488 DEFB118Q96PH6 123 aa20.06■□□□□ 0.8
AP3D1-212ENST00000592488 SPATC1LQ9H0A9 340 aa20.06■□□□□ 0.8
AP3D1-212ENST00000592488 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.06■□□□□ 0.85e-6■□□□□ 8.4
AP3D1-212ENST00000592488 PARP14Q460N5 1801 aa20.06■□□□□ 0.8
AP3D1-212ENST00000592488 PLIN4Q96Q06 1357 aa20.06■□□□□ 0.8
AP3D1-212ENST00000592488 SLC15A5A6NIM6 579 aa20.05■□□□□ 0.8
AP3D1-212ENST00000592488 CAPN2P17655 700 aa20.05■□□□□ 0.8
AP3D1-212ENST00000592488 PTPREP23469 700 aa20.05■□□□□ 0.8
AP3D1-212ENST00000592488 IRX6P78412 446 aaPredicted RBP20.05■□□□□ 0.8
AP3D1-212ENST00000592488 TRIM32Q13049 653 aa20.05■□□□□ 0.8
AP3D1-212ENST00000592488 MAP2K5Q13163 448 aa20.05■□□□□ 0.8
AP3D1-212ENST00000592488 NMIQ13287 307 aaPredicted RBP20.05■□□□□ 0.8
AP3D1-212ENST00000592488 VPS53Q5VIR6 699 aa20.05■□□□□ 0.8
AP3D1-212ENST00000592488 SAMD1Q6SPF0 538 aaPredicted RBP20.05■□□□□ 0.8
AP3D1-212ENST00000592488 SHCBP1Q8NEM2 672 aa20.05■□□□□ 0.8
AP3D1-212ENST00000592488 MOV10L1Q9BXT6 1211 aaKnown RBP20.05■□□□□ 0.8
AP3D1-212ENST00000592488 RPTORQ8N122 1335 aa20.04■□□□□ 0.8
AP3D1-212ENST00000592488 TSPY3P0CV98 308 aa20.04■□□□□ 0.8
AP3D1-212ENST00000592488 TSPY8P0CW00 308 aa20.04■□□□□ 0.8
AP3D1-212ENST00000592488 ALX1Q15699 326 aa20.04■□□□□ 0.8
AP3D1-212ENST00000592488 FAM83BQ5T0W9 1011 aa20.04■□□□□ 0.8
AP3D1-212ENST00000592488 NEDD1Q8NHV4 660 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms