RNA–Protein interactions for RNA: ENST00000591417.5

HKR1-222, Transcript of HKR1, GLI-Kruppel zinc finger family member, human

TSL 4 BASIC

Gene HKR1, Length 525 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HKR1-222	ENST00000591417	SEPT2	Q15019	361 aa		13.82	□□□□□ -0.2
HKR1-222	ENST00000591417	ERC1	Q8IUD2	1116 aa		13.82	□□□□□ -0.2
HKR1-222	ENST00000591417	FTSJ3	Q8IY81	847 aa	Known RBP	13.82	□□□□□ -0.2
HKR1-222	ENST00000591417	ABRA	Q8N0Z2	381 aa		13.82	□□□□□ -0.2
HKR1-222	ENST00000591417	TRPV1	Q8NER1	839 aa		13.82	□□□□□ -0.2
HKR1-222	ENST00000591417	EAF2	Q96CJ1	260 aa	Predicted RBP	13.82	□□□□□ -0.2
HKR1-222	ENST00000591417	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.82	□□□□□ -0.2
HKR1-222	ENST00000591417	ERCC3	P19447	782 aa		13.81	□□□□□ -0.2
HKR1-222	ENST00000591417	GUCY1A2	P33402	732 aa		13.81	□□□□□ -0.2
HKR1-222	ENST00000591417	SHH	Q15465	462 aa		13.81	□□□□□ -0.2
HKR1-222	ENST00000591417	NCAPG2	Q86XI2	1143 aa		13.81	□□□□□ -0.2
HKR1-222	ENST00000591417	SEMA6B	Q9H3T3	888 aa		13.81	□□□□□ -0.2
HKR1-222	ENST00000591417	SH2D4A	Q9H788	454 aa		13.81	□□□□□ -0.2
HKR1-222	ENST00000591417	ARHGEF10L	Q9HCE6	1279 aa		13.81	□□□□□ -0.2
HKR1-222	ENST00000591417	MCM9	Q9NXL9	1143 aa		13.81	□□□□□ -0.2
HKR1-222	ENST00000591417	TLR7	Q9NYK1	1049 aa	Known RBP	13.81	□□□□□ -0.2
HKR1-222	ENST00000591417	IGHA2	P01877	340 aa		13.8	□□□□□ -0.2
HKR1-222	ENST00000591417	FCER1A	P12319	257 aa		13.8	□□□□□ -0.2
HKR1-222	ENST00000591417	DSG3	P32926	999 aa		13.8	□□□□□ -0.2
HKR1-222	ENST00000591417	SMAD3	P84022	425 aa	Known RBP	13.8	□□□□□ -0.2
HKR1-222	ENST00000591417	HSP90AB4P	Q58FF6	505 aa		13.8	□□□□□ -0.2
HKR1-222	ENST00000591417	ANO1	Q5XXA6	986 aa		13.8	□□□□□ -0.2
HKR1-222	ENST00000591417	TMEM179	Q6ZVK1	233 aa		13.8	□□□□□ -0.2
HKR1-222	ENST00000591417	AACS	Q86V21	672 aa		13.8	□□□□□ -0.2
HKR1-222	ENST00000591417	POTED	Q86YR6	584 aa		13.8	□□□□□ -0.2
HKR1-222	ENST00000591417	BAD	Q92934	168 aa		13.8	□□□□□ -0.2
HKR1-222	ENST00000591417	CDX2	Q99626	313 aa	Predicted RBP	13.8	□□□□□ -0.2
HKR1-222	ENST00000591417	RIOK1	Q9BRS2	568 aa	Known RBP	13.8	□□□□□ -0.2
HKR1-222	ENST00000591417	ANTXR1	Q9H6X2	564 aa		13.8	□□□□□ -0.2
HKR1-222	ENST00000591417	C1orf115	Q9H7X2	142 aa		13.8	□□□□□ -0.2
HKR1-222	ENST00000591417	SWAP70	Q9UH65	585 aa		13.8	□□□□□ -0.2
HKR1-222	ENST00000591417	NRBP1	Q9UHY1	535 aa		13.8	□□□□□ -0.2
HKR1-222	ENST00000591417	TACC3	Q9Y6A5	838 aa		13.8	□□□□□ -0.2
HKR1-222	ENST00000591417	RLF	Q13129	1914 aa		13.8	□□□□□ -0.2
HKR1-222	ENST00000591417	DNAH12	Q6ZR08	3092 aa		13.79	□□□□□ -0.2
HKR1-222	ENST00000591417	CCER2	I3L3R5	266 aa		13.79	□□□□□ -0.2
HKR1-222	ENST00000591417	FLOT1	O75955	427 aa		13.79	□□□□□ -0.2
HKR1-222	ENST00000591417	SLC25A27	O95847	323 aa		13.79	□□□□□ -0.2
HKR1-222	ENST00000591417	ADCYAP1R1	P41586	468 aa		13.79	□□□□□ -0.2
HKR1-222	ENST00000591417	GABPA	Q06546	454 aa		13.79	□□□□□ -0.2
HKR1-222	ENST00000591417	LRRC41	Q15345	812 aa		13.79	□□□□□ -0.2
HKR1-222	ENST00000591417	TRIM60	Q495X7	471 aa		13.79	□□□□□ -0.2
HKR1-222	ENST00000591417	SLC9C2	Q5TAH2	1124 aa		13.79	□□□□□ -0.2
HKR1-222	ENST00000591417	C1orf53	Q5VUE5	145 aa		13.79	□□□□□ -0.2
HKR1-222	ENST00000591417	ITPRIP	Q8IWB1	547 aa		13.79	□□□□□ -0.2
HKR1-222	ENST00000591417	MAFA	Q8NHW3	353 aa	Predicted RBP	13.79	□□□□□ -0.2
HKR1-222	ENST00000591417		A0A1W2PRG0	241 aa		13.78	□□□□□ -0.2
HKR1-222	ENST00000591417	COBL	O75128	1261 aa		13.78	□□□□□ -0.2
HKR1-222	ENST00000591417	RARB	P10826	455 aa		13.78	□□□□□ -0.2
HKR1-222	ENST00000591417	SNX17	Q15036	470 aa		13.78	□□□□□ -0.2
HKR1-222	ENST00000591417	PRAMEF19	Q5SWL8	479 aa		13.78	□□□□□ -0.2
HKR1-222	ENST00000591417	RNF180	Q86T96	592 aa		13.78	□□□□□ -0.2
HKR1-222	ENST00000591417	AMOTL1	Q8IY63	956 aa		13.78	□□□□□ -0.2
HKR1-222	ENST00000591417	FERMT2	Q96AC1	680 aa		13.78	□□□□□ -0.2
HKR1-222	ENST00000591417	ZNF236	Q9UL36	1845 aa		13.78	□□□□□ -0.2
HKR1-222	ENST00000591417	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.78	□□□□□ -0.2
HKR1-222	ENST00000591417	C9orf50	Q5SZB4	431 aa		13.77	□□□□□ -0.21
HKR1-222	ENST00000591417	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.77	□□□□□ -0.21
HKR1-222	ENST00000591417	SYMPK	Q92797	1274 aa	Known RBP	13.77	□□□□□ -0.21
HKR1-222	ENST00000591417	MAML3	Q96JK9	1138 aa		13.77	□□□□□ -0.21
HKR1-222	ENST00000591417	CCDC17	Q96LX7	622 aa		13.77	□□□□□ -0.21
HKR1-222	ENST00000591417	XPNPEP3	Q9NQH7	507 aa		13.77	□□□□□ -0.21
HKR1-222	ENST00000591417	PDLIM7	Q9NR12	457 aa		13.77	□□□□□ -0.21
HKR1-222	ENST00000591417	TMX2	Q9Y320	296 aa		13.77	□□□□□ -0.21
HKR1-222	ENST00000591417	SMCHD1	A6NHR9	2005 aa		13.76	□□□□□ -0.21
HKR1-222	ENST00000591417	LTBP2	Q14767	1821 aa		13.76	□□□□□ -0.21
HKR1-222	ENST00000591417	TMEM265	A0A087WTH1	108 aa		13.76	□□□□□ -0.21
HKR1-222	ENST00000591417	WDR46	O15213	610 aa	Known RBP	13.76	□□□□□ -0.21
HKR1-222	ENST00000591417	CLTB	P09497	229 aa		13.76	□□□□□ -0.21
HKR1-222	ENST00000591417	PDE6A	P16499	860 aa		13.76	□□□□□ -0.21
HKR1-222	ENST00000591417	COPB2	P35606	906 aa		13.76	□□□□□ -0.21
HKR1-222	ENST00000591417	TLE2	Q04725	743 aa		13.76	□□□□□ -0.21
HKR1-222	ENST00000591417	ICA1	Q05084	483 aa		13.76	□□□□□ -0.21
HKR1-222	ENST00000591417	KCTD2	Q14681	263 aa		13.76	□□□□□ -0.21
HKR1-222	ENST00000591417	CLASRP	Q8N2M8	674 aa	Known RBP	13.76	□□□□□ -0.21
HKR1-222	ENST00000591417	ATG4C	Q96DT6	458 aa		13.76	□□□□□ -0.21
HKR1-222	ENST00000591417	DDRGK1	Q96HY6	314 aa		13.76	□□□□□ -0.21
HKR1-222	ENST00000591417	MMP19	Q99542	508 aa		13.76	□□□□□ -0.21
HKR1-222	ENST00000591417	VCPKMT	Q9H867	229 aa		13.76	□□□□□ -0.21
HKR1-222	ENST00000591417	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.76	□□□□□ -0.21
HKR1-222	ENST00000591417	ATP8A2	Q9NTI2	1148 aa		13.76	□□□□□ -0.21
HKR1-222	ENST00000591417	PHF24	Q9UPV7	400 aa		13.76	□□□□□ -0.21
HKR1-222	ENST00000591417	EXOC6B	Q9Y2D4	811 aa		13.76	□□□□□ -0.21
HKR1-222	ENST00000591417	DIS3	Q9Y2L1	958 aa	Known RBP	13.76	□□□□□ -0.21
HKR1-222	ENST00000591417	ZNF532	Q9HCE3	1301 aa		13.75	□□□□□ -0.21
HKR1-222	ENST00000591417	MYH8	P13535	1937 aa		13.75	□□□□□ -0.21
HKR1-222	ENST00000591417	TRIM43B	A6NCK2	446 aa		13.75	□□□□□ -0.21
HKR1-222	ENST00000591417	FOSL2	P15408	326 aa		13.75	□□□□□ -0.21
HKR1-222	ENST00000591417	RAG1	P15918	1043 aa		13.75	□□□□□ -0.21
HKR1-222	ENST00000591417	FAM47A	Q5JRC9	791 aa		13.75	□□□□□ -0.21
HKR1-222	ENST00000591417	CEP85	Q6P2H3	762 aa		13.75	□□□□□ -0.21
HKR1-222	ENST00000591417	SH3RF1	Q7Z6J0	888 aa		13.75	□□□□□ -0.21
HKR1-222	ENST00000591417	SPICE1	Q8N0Z3	855 aa		13.75	□□□□□ -0.21
HKR1-222	ENST00000591417	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
HKR1-222	ENST00000591417	SDR42E1	Q8WUS8	393 aa		13.75	□□□□□ -0.21
HKR1-222	ENST00000591417	MYLIP	Q8WY64	445 aa		13.75	□□□□□ -0.21
HKR1-222	ENST00000591417	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.75	□□□□□ -0.21
HKR1-222	ENST00000591417	RNPC3	Q96LT9	517 aa	Known RBP	13.75	□□□□□ -0.21
HKR1-222	ENST00000591417	TINF2	Q9BSI4	451 aa		13.75	□□□□□ -0.21
HKR1-222	ENST00000591417	NAV1	Q8NEY1	1877 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms