RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 C9orf78Q9NZ63 289 aaPredicted RBP8.66□□□□□ -1.02
NEDD4L-229ENST00000590506 ADD3Q9UEY8 706 aaKnown RBP8.66□□□□□ -1.02
NEDD4L-229ENST00000590506 DACH1Q9UI36 760 aa8.66□□□□□ -1.02
NEDD4L-229ENST00000590506 KDM6AO15550 1401 aaPredicted RBP8.65□□□□□ -1.02
NEDD4L-229ENST00000590506 ANKRD18BA2A2Z9 1011 aa8.65□□□□□ -1.02
NEDD4L-229ENST00000590506 E7EWF7 191 aa8.65□□□□□ -1.02
NEDD4L-229ENST00000590506 COBLO75128 1261 aa8.65□□□□□ -1.02
NEDD4L-229ENST00000590506 CCT6AP40227 531 aaKnown RBP8.65□□□□□ -1.02
NEDD4L-229ENST00000590506 MATR3P43243 847 aaKnown RBP eCLIP8.65□□□□□ -1.02
NEDD4L-229ENST00000590506 MORC3Q14149 939 aa8.65□□□□□ -1.02
NEDD4L-229ENST00000590506 PAPD7Q5XG87 772 aaKnown RBP8.65□□□□□ -1.02
NEDD4L-229ENST00000590506 ALS2CLQ60I27 953 aa8.65□□□□□ -1.02
NEDD4L-229ENST00000590506 C3orf20Q8ND61 904 aa8.65□□□□□ -1.02
NEDD4L-229ENST00000590506 HOOK2Q96ED9 719 aa8.65□□□□□ -1.02
NEDD4L-229ENST00000590506 CYFIP2Q96F07 1278 aa8.65□□□□□ -1.02
NEDD4L-229ENST00000590506 RPGRIP1Q96KN7 1286 aa8.65□□□□□ -1.02
NEDD4L-229ENST00000590506 AIFM3Q96NN9 605 aa8.65□□□□□ -1.02
NEDD4L-229ENST00000590506 NUP88Q99567 741 aaPredicted RBP8.65□□□□□ -1.02
NEDD4L-229ENST00000590506 AGXT2Q9BYV1 514 aa8.65□□□□□ -1.02
NEDD4L-229ENST00000590506 NOD2Q9HC29 1040 aa8.65□□□□□ -1.02
NEDD4L-229ENST00000590506 SEC31BQ9NQW1 1179 aa8.65□□□□□ -1.02
NEDD4L-229ENST00000590506 SERTAD1Q9UHV2 236 aa8.65□□□□□ -1.02
NEDD4L-229ENST00000590506 TRPC6Q9Y210 931 aa8.65□□□□□ -1.02
NEDD4L-229ENST00000590506 CEMIPQ8WUJ3 1361 aa8.65□□□□□ -1.02
NEDD4L-229ENST00000590506 ATP6V1G2O95670 118 aa8.65□□□□□ -1.03
NEDD4L-229ENST00000590506 FAM107AO95990 144 aa8.65□□□□□ -1.03
NEDD4L-229ENST00000590506 ATP5JP18859 108 aa8.65□□□□□ -1.03
NEDD4L-229ENST00000590506 NR1D1P20393 614 aa8.65□□□□□ -1.03
NEDD4L-229ENST00000590506 SCTRP47872 440 aa8.65□□□□□ -1.03
NEDD4L-229ENST00000590506 PLCD1P51178 756 aa8.65□□□□□ -1.03
NEDD4L-229ENST00000590506 PPARAQ07869 468 aa8.65□□□□□ -1.03
NEDD4L-229ENST00000590506 PTPAQ15257 358 aa8.65□□□□□ -1.03
NEDD4L-229ENST00000590506 MCMDC2Q4G0Z9 681 aa8.65□□□□□ -1.03
NEDD4L-229ENST00000590506 CCDC122Q5T0U0 273 aa8.65□□□□□ -1.03
NEDD4L-229ENST00000590506 CCDC70Q6NSX1 233 aa8.65□□□□□ -1.03
NEDD4L-229ENST00000590506 UBE3BQ7Z3V4 1068 aa8.65□□□□□ -1.03
NEDD4L-229ENST00000590506 IL17REQ8NFR9 667 aa8.65□□□□□ -1.03
NEDD4L-229ENST00000590506 OR8K1Q8NGG5 319 aa8.65□□□□□ -1.03
NEDD4L-229ENST00000590506 KLHDC4Q8TBB5 520 aa8.65□□□□□ -1.03
NEDD4L-229ENST00000590506 CCDC51Q96ER9 411 aa8.65□□□□□ -1.03
NEDD4L-229ENST00000590506 EYA1Q99502 592 aa8.65□□□□□ -1.03
NEDD4L-229ENST00000590506 NUP58Q9BVL2 599 aa8.65□□□□□ -1.03
NEDD4L-229ENST00000590506 EPN1Q9Y6I3 576 aaPredicted RBP8.65□□□□□ -1.03
NEDD4L-229ENST00000590506 PPP6R2O75170 966 aa8.64□□□□□ -1.03
NEDD4L-229ENST00000590506 FECHP22830 423 aa8.64□□□□□ -1.03
NEDD4L-229ENST00000590506 MDH1P40925 334 aaKnown RBP8.64□□□□□ -1.03
NEDD4L-229ENST00000590506 FILIP1LQ4L180 1135 aa8.64□□□□□ -1.03
NEDD4L-229ENST00000590506 TTC39AQ5SRH9 613 aa8.64□□□□□ -1.03
NEDD4L-229ENST00000590506 CCDC43Q96MW1 224 aaKnown RBP8.64□□□□□ -1.03
NEDD4L-229ENST00000590506 FAM210AQ96ND0 272 aa8.64□□□□□ -1.03
NEDD4L-229ENST00000590506 BATF3Q9NR55 127 aa8.64□□□□□ -1.03
NEDD4L-229ENST00000590506 CHPF2Q9P2E5 772 aa8.64□□□□□ -1.03
NEDD4L-229ENST00000590506 RPS6KL1Q9Y6S9 549 aa8.64□□□□□ -1.03
NEDD4L-229ENST00000590506 FAM237AA0A1B0GTK4 181 aa8.64□□□□□ -1.03
NEDD4L-229ENST00000590506 BACH1O14867 736 aa8.64□□□□□ -1.03
NEDD4L-229ENST00000590506 NDUFA10O95299 355 aa8.64□□□□□ -1.03
NEDD4L-229ENST00000590506 EPHB4P54760 987 aa8.64□□□□□ -1.03
NEDD4L-229ENST00000590506 IFFO1Q0D2I5 559 aa8.64□□□□□ -1.03
NEDD4L-229ENST00000590506 MIS18BP1Q6P0N0 1132 aa8.64□□□□□ -1.03
NEDD4L-229ENST00000590506 SPAG5Q96R06 1193 aa8.64□□□□□ -1.03
NEDD4L-229ENST00000590506 JADE2Q9NQC1 790 aa8.64□□□□□ -1.03
NEDD4L-229ENST00000590506 GGA2Q9UJY4 613 aa8.64□□□□□ -1.03
NEDD4L-229ENST00000590506 ZNF233A6NK53 670 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 TTC36A6NLP5 189 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 POLR2DO15514 142 aaKnown RBP8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 MGRN1O60291 552 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 SMNDC1O75940 238 aaKnown RBP eCLIP8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 HPDP32754 393 aaPredicted RBP8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 KRT9P35527 623 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 HERVK_113P62684 666 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 ELF3P78545 371 aaPredicted RBP8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 QPCTQ16769 361 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 MSL1Q68DK7 614 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 NCAPD2Q15021 1401 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 PRR36Q9H6K5 1346 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 GOLGA8BA8MQT2 603 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 CPLX1O14810 134 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 CD44P16070 742 aaKnown RBP8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 ARID4AP29374 1257 aaPredicted RBP8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 SARSP49591 514 aaKnown RBP8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 GRIN1Q05586 938 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 XRCC4Q13426 336 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 CFAP58Q5T655 872 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 SPATA1Q5VX52 437 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 HIBCHQ6NVY1 386 aaPredicted RBP8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 DDX46Q7L014 1031 aaKnown RBP8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 VPS37DQ86XT2 251 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 CUL5Q93034 780 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 MAP3K14Q99558 947 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 HAUS4Q9H6D7 363 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 HOMER3Q9NSC5 361 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 SMARCAL1Q9NZC9 954 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 L3MBTL1Q9Y468 752 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 SYNRGQ9UMZ2 1314 aa8.63□□□□□ -1.03
NEDD4L-229ENST00000590506 KLF18A0A0U1RQI7 1052 aa8.62□□□□□ -1.03
NEDD4L-229ENST00000590506 ANP32DO95626 131 aa8.62□□□□□ -1.03
NEDD4L-229ENST00000590506 IDEP14735 1019 aa8.62□□□□□ -1.03
NEDD4L-229ENST00000590506 CWF19L2Q2TBE0 894 aaKnown RBP8.62□□□□□ -1.03
NEDD4L-229ENST00000590506 TBC1D25Q3MII6 688 aa8.62□□□□□ -1.03
NEDD4L-229ENST00000590506 CADPS2Q86UW7 1296 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms