RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 PTPREP23469 700 aa12.61□□□□□ -0.39
RETREG3-209ENST00000590035 CCND3P30281 292 aaPredicted RBP12.61□□□□□ -0.39
RETREG3-209ENST00000590035 ADD2P35612 726 aa12.61□□□□□ -0.39
RETREG3-209ENST00000590035 PDE3AQ14432 1141 aa12.61□□□□□ -0.39
RETREG3-209ENST00000590035 RAB3GAP1Q15042 981 aa12.61□□□□□ -0.39
RETREG3-209ENST00000590035 ZYXQ15942 572 aaKnown RBP12.61□□□□□ -0.39
RETREG3-209ENST00000590035 SLC44A5Q8NCS7 719 aa12.61□□□□□ -0.39
RETREG3-209ENST00000590035 SDR42E1Q8WUS8 393 aa12.61□□□□□ -0.39
RETREG3-209ENST00000590035 FEZ1Q99689 392 aa12.61□□□□□ -0.39
RETREG3-209ENST00000590035 HAUS7Q99871 368 aa12.61□□□□□ -0.39
RETREG3-209ENST00000590035 C11orf49Q9H6J7 331 aa12.61□□□□□ -0.39
RETREG3-209ENST00000590035 MYH8P13535 1937 aa12.6□□□□□ -0.39
RETREG3-209ENST00000590035 SMIM22K7EJ46 135 aa12.6□□□□□ -0.39
RETREG3-209ENST00000590035 HMMRO75330 724 aa12.6□□□□□ -0.39
RETREG3-209ENST00000590035 CHGBP05060 677 aa12.6□□□□□ -0.39
RETREG3-209ENST00000590035 SLFNL1Q499Z3 407 aa12.6□□□□□ -0.39
RETREG3-209ENST00000590035 RPAP3Q9H6T3 665 aaPredicted RBP12.6□□□□□ -0.39
RETREG3-209ENST00000590035 CABP5Q9NP86 173 aa12.6□□□□□ -0.39
RETREG3-209ENST00000590035 PAG1Q9NWQ8 432 aa12.6□□□□□ -0.39
RETREG3-209ENST00000590035 MCM9Q9NXL9 1143 aa12.6□□□□□ -0.39
RETREG3-209ENST00000590035 STAP2Q9UGK3 403 aa12.6□□□□□ -0.39
RETREG3-209ENST00000590035 PRKAB2O43741 272 aa12.59□□□□□ -0.39
RETREG3-209ENST00000590035 POLR3DP05423 398 aaPredicted RBP12.59□□□□□ -0.39
RETREG3-209ENST00000590035 IFIT2P09913 472 aaKnown RBP12.59□□□□□ -0.39
RETREG3-209ENST00000590035 CCNA1P78396 465 aa12.59□□□□□ -0.39
RETREG3-209ENST00000590035 UBE3CQ15386 1083 aa12.59□□□□□ -0.39
RETREG3-209ENST00000590035 C12orf60Q5U649 245 aa12.59□□□□□ -0.39
RETREG3-209ENST00000590035 TMEM179Q6ZVK1 233 aa12.59□□□□□ -0.39
RETREG3-209ENST00000590035 SHCBP1Q8NEM2 672 aa12.59□□□□□ -0.39
RETREG3-209ENST00000590035 NPLOC4Q8TAT6 608 aa12.59□□□□□ -0.39
RETREG3-209ENST00000590035 DNAJC2Q99543 621 aaKnown RBP12.59□□□□□ -0.39
RETREG3-209ENST00000590035 ARMT1Q9H993 441 aa12.59□□□□□ -0.39
RETREG3-209ENST00000590035 ATP8A2Q9NTI2 1148 aa12.59□□□□□ -0.39
RETREG3-209ENST00000590035 SWAP70Q9UH65 585 aa12.59□□□□□ -0.39
RETREG3-209ENST00000590035 TMX2Q9Y320 296 aa12.59□□□□□ -0.39
RETREG3-209ENST00000590035 MBD4O95243 580 aa12.58□□□□□ -0.4
RETREG3-209ENST00000590035 AKR1B1P15121 316 aa12.58□□□□□ -0.4
RETREG3-209ENST00000590035 COG2Q14746 738 aa12.58□□□□□ -0.4
RETREG3-209ENST00000590035 C20orf194Q5TEA3 1177 aa12.58□□□□□ -0.4
RETREG3-209ENST00000590035 C7orf61Q8IZ16 206 aa12.58□□□□□ -0.4
RETREG3-209ENST00000590035 TRPV1Q8NER1 839 aa12.58□□□□□ -0.4
RETREG3-209ENST00000590035 DYNLL2Q96FJ2 89 aa12.58□□□□□ -0.4
RETREG3-209ENST00000590035 MOV10L1Q9BXT6 1211 aaKnown RBP12.58□□□□□ -0.4
RETREG3-209ENST00000590035 BOLA2Q9H3K6 86 aa12.58□□□□□ -0.4
RETREG3-209ENST00000590035 ADAMTS5Q9UNA0 930 aa12.58□□□□□ -0.4
RETREG3-209ENST00000590035 GLRX3O76003 335 aaKnown RBP12.57□□□□□ -0.4
RETREG3-209ENST00000590035 CYBAP13498 195 aa12.57□□□□□ -0.4
RETREG3-209ENST00000590035 GPR153Q6NV75 609 aa12.57□□□□□ -0.4
RETREG3-209ENST00000590035 C16orf86Q6ZW13 317 aa12.57□□□□□ -0.4
RETREG3-209ENST00000590035 CLEC10AQ8IUN9 316 aa12.57□□□□□ -0.4
RETREG3-209ENST00000590035 LPAR1Q92633 364 aa12.57□□□□□ -0.4
RETREG3-209ENST00000590035 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.57□□□□□ -0.4
RETREG3-209ENST00000590035 VCPKMTQ9H867 229 aa12.57□□□□□ -0.4
RETREG3-209ENST00000590035 HOXC10Q9NYD6 342 aa12.57□□□□□ -0.4
RETREG3-209ENST00000590035 RCAN3Q9UKA8 241 aa12.57□□□□□ -0.4
RETREG3-209ENST00000590035 CYP2D7A0A087X1C5 515 aa12.56□□□□□ -0.4
RETREG3-209ENST00000590035 APBB1O00213 710 aa12.56□□□□□ -0.4
RETREG3-209ENST00000590035 STRNO43815 780 aa12.56□□□□□ -0.4
RETREG3-209ENST00000590035 MAGEA10P43363 369 aaPredicted RBP12.56□□□□□ -0.4
RETREG3-209ENST00000590035 CDK8P49336 464 aa12.56□□□□□ -0.4
RETREG3-209ENST00000590035 LRRC26Q2I0M4 334 aa12.56□□□□□ -0.4
RETREG3-209ENST00000590035 LRIT3Q3SXY7 679 aa12.56□□□□□ -0.4
RETREG3-209ENST00000590035 OLFML2BQ68BL8 750 aa12.56□□□□□ -0.4
RETREG3-209ENST00000590035 MB21D1Q8N884 522 aa12.56□□□□□ -0.4
RETREG3-209ENST00000590035 LRCH3Q96II8 777 aa12.56□□□□□ -0.4
RETREG3-209ENST00000590035 CCDC17Q96LX7 622 aa12.56□□□□□ -0.4
RETREG3-209ENST00000590035 SPATC1LQ9H0A9 340 aa12.56□□□□□ -0.4
RETREG3-209ENST00000590035 PUS7LQ9H0K6 701 aaKnown RBP12.56□□□□□ -0.4
RETREG3-209ENST00000590035 DDX20Q9UHI6 824 aaKnown RBP12.56□□□□□ -0.4
RETREG3-209ENST00000590035 ZMYND8Q9ULU4 1186 aaPredicted RBP12.56□□□□□ -0.4
RETREG3-209ENST00000590035 ROBO3Q96MS0 1386 aa12.56□□□□□ -0.4
RETREG3-209ENST00000590035 COL11A1P12107 1806 aaPredicted RBP12.55□□□□□ -0.4
RETREG3-209ENST00000590035 USP17L12C9JPN9 530 aa12.55□□□□□ -0.4
RETREG3-209ENST00000590035 USP17L21D6R901 530 aa12.55□□□□□ -0.4
RETREG3-209ENST00000590035 COBLO75128 1261 aa12.55□□□□□ -0.4
RETREG3-209ENST00000590035 ERCC3P19447 782 aa12.55□□□□□ -0.4
RETREG3-209ENST00000590035 ADORA2AP29274 412 aa12.55□□□□□ -0.4
RETREG3-209ENST00000590035 ICA1Q05084 483 aa12.55□□□□□ -0.4
RETREG3-209ENST00000590035 MFSD14CQ5VZR4 134 aa12.55□□□□□ -0.4
RETREG3-209ENST00000590035 CTR9Q6PD62 1173 aa12.55□□□□□ -0.4
RETREG3-209ENST00000590035 CCAR1Q8IX12 1150 aaKnown RBP12.55□□□□□ -0.4
RETREG3-209ENST00000590035 ABRAQ8N0Z2 381 aa12.55□□□□□ -0.4
RETREG3-209ENST00000590035 REPS2Q8NFH8 660 aa12.55□□□□□ -0.4
RETREG3-209ENST00000590035 CHMP4BQ9H444 224 aaKnown RBP12.55□□□□□ -0.4
RETREG3-209ENST00000590035 LTBP2Q14767 1821 aa12.55□□□□□ -0.4
RETREG3-209ENST00000590035 ZNFX1Q9P2E3 1918 aaKnown RBP12.54□□□□□ -0.4
RETREG3-209ENST00000590035 WDR46O15213 610 aaKnown RBP12.54□□□□□ -0.4
RETREG3-209ENST00000590035 MSCO60682 206 aa12.54□□□□□ -0.4
RETREG3-209ENST00000590035 SYN1P17600 705 aa12.54□□□□□ -0.4
RETREG3-209ENST00000590035 CYP2C19P33261 490 aa12.54□□□□□ -0.4
RETREG3-209ENST00000590035 SBK1Q52WX2 424 aa12.54□□□□□ -0.4
RETREG3-209ENST00000590035 ATG4CQ96DT6 458 aa12.54□□□□□ -0.4
RETREG3-209ENST00000590035 STRBPQ96SI9 672 aaKnown RBP12.54□□□□□ -0.4
RETREG3-209ENST00000590035 LRRCC1Q9C099 1032 aa12.54□□□□□ -0.4
RETREG3-209ENST00000590035 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.54□□□□□ -0.4
RETREG3-209ENST00000590035 DCTPP1Q9H773 170 aa12.54□□□□□ -0.4
RETREG3-209ENST00000590035 IVNS1ABPQ9Y6Y0 642 aa12.54□□□□□ -0.4
RETREG3-209ENST00000590035 MPHOSPH10O00566 681 aaKnown RBP12.53□□□□□ -0.4
RETREG3-209ENST00000590035 SMARCA5O60264 1052 aaPredicted RBP12.53□□□□□ -0.4
RETREG3-209ENST00000590035 ATP2B2Q01814 1243 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms