RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 KIAA1755Q5JYT7 1200 aa18.15■□□□□ 0.5
ERCC1-209ENST00000589214 SIAH1Q8IUQ4 282 aa18.15■□□□□ 0.5
ERCC1-209ENST00000589214 SPICE1Q8N0Z3 855 aa18.15■□□□□ 0.5
ERCC1-209ENST00000589214 NAPBQ9H115 298 aa18.15■□□□□ 0.5
ERCC1-209ENST00000589214 PORCNQ9H237 461 aa18.15■□□□□ 0.5
ERCC1-209ENST00000589214 MKNK2Q9HBH9 465 aa18.15■□□□□ 0.5
ERCC1-209ENST00000589214 TMX2Q9Y320 296 aa18.15■□□□□ 0.5
ERCC1-209ENST00000589214 CENPFP49454 3210 aa18.14■□□□□ 0.49
ERCC1-209ENST00000589214 A0A0D9SFI3 127 aa18.14■□□□□ 0.49
ERCC1-209ENST00000589214 CNMDO75829 334 aa18.14■□□□□ 0.49
ERCC1-209ENST00000589214 INHAP05111 366 aa18.14■□□□□ 0.49
ERCC1-209ENST00000589214 CCL5P13501 91 aa18.14■□□□□ 0.49
ERCC1-209ENST00000589214 EEF2P13639 858 aaKnown RBP18.14■□□□□ 0.49
ERCC1-209ENST00000589214 Q3C1V9 767 aa18.14■□□□□ 0.49
ERCC1-209ENST00000589214 SKAP1Q86WV1 359 aa18.14■□□□□ 0.49
ERCC1-209ENST00000589214 CCAR1Q8IX12 1150 aaKnown RBP18.14■□□□□ 0.49
ERCC1-209ENST00000589214 VCPKMTQ9H867 229 aa18.14■□□□□ 0.49
ERCC1-209ENST00000589214 KANSL2Q9H9L4 492 aa18.14■□□□□ 0.49
ERCC1-209ENST00000589214 CWC22Q9HCG8 908 aaKnown RBP18.14■□□□□ 0.49
ERCC1-209ENST00000589214 RABGAP1Q9Y3P9 1069 aa18.14■□□□□ 0.49
ERCC1-209ENST00000589214 PRDM1O75626 825 aa18.13■□□□□ 0.49
ERCC1-209ENST00000589214 SDSP20132 328 aa18.13■□□□□ 0.49
ERCC1-209ENST00000589214 MAPK4P31152 587 aa18.13■□□□□ 0.49
ERCC1-209ENST00000589214 PXYLP1Q8TE99 480 aa18.13■□□□□ 0.49
ERCC1-209ENST00000589214 LPAR1Q92633 364 aa18.13■□□□□ 0.49
ERCC1-209ENST00000589214 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.13■□□□□ 0.49
ERCC1-209ENST00000589214 HELLSQ9NRZ9 838 aa18.13■□□□□ 0.49
ERCC1-209ENST00000589214 PARP14Q460N5 1801 aa18.13■□□□□ 0.49
ERCC1-209ENST00000589214 RLFQ13129 1914 aa18.13■□□□□ 0.49
ERCC1-209ENST00000589214 KIAA0100Q14667 2235 aaKnown RBP18.13■□□□□ 0.49
ERCC1-209ENST00000589214 FOXP2O15409 715 aa18.12■□□□□ 0.49
ERCC1-209ENST00000589214 RAD21O60216 631 aa18.12■□□□□ 0.49
ERCC1-209ENST00000589214 NEFLP07196 543 aa18.12■□□□□ 0.49
ERCC1-209ENST00000589214 CENPBP07199 599 aaPredicted RBP18.12■□□□□ 0.49
ERCC1-209ENST00000589214 GSPT1P15170 499 aaKnown RBP18.12■□□□□ 0.49
ERCC1-209ENST00000589214 PPARAQ07869 468 aa18.12■□□□□ 0.49
ERCC1-209ENST00000589214 TTC22Q5TAA0 569 aa18.12■□□□□ 0.49
ERCC1-209ENST00000589214 VPS53Q5VIR6 699 aa18.12■□□□□ 0.49
ERCC1-209ENST00000589214 WDR78Q5VTH9 848 aa18.12■□□□□ 0.49
ERCC1-209ENST00000589214 SAMD1Q6SPF0 538 aaPredicted RBP18.12■□□□□ 0.49
ERCC1-209ENST00000589214 LBX2Q6XYB7 198 aa18.12■□□□□ 0.49
ERCC1-209ENST00000589214 GPR142Q7Z601 462 aa18.12■□□□□ 0.49
ERCC1-209ENST00000589214 SOCS4Q8WXH5 440 aa18.12■□□□□ 0.49
ERCC1-209ENST00000589214 RNF208Q9H0X6 261 aa18.12■□□□□ 0.49
ERCC1-209ENST00000589214 UNC93B1Q9H1C4 597 aa18.12■□□□□ 0.49
ERCC1-209ENST00000589214 BTBD7Q9P203 1132 aa18.12■□□□□ 0.49
ERCC1-209ENST00000589214 GJD2Q9UKL4 321 aa18.12■□□□□ 0.49
ERCC1-209ENST00000589214 WDR46O15213 610 aaKnown RBP18.11■□□□□ 0.49
ERCC1-209ENST00000589214 FLOT1O75955 427 aa18.11■□□□□ 0.49
ERCC1-209ENST00000589214 CCNA1P78396 465 aa18.11■□□□□ 0.49
ERCC1-209ENST00000589214 MCMDC2Q4G0Z9 681 aa18.11■□□□□ 0.49
ERCC1-209ENST00000589214 ZNF589Q86UQ0 364 aaPredicted RBP18.11■□□□□ 0.49
ERCC1-209ENST00000589214 SHISA4Q96DD7 197 aa18.11■□□□□ 0.49
ERCC1-209ENST00000589214 NUDT12Q9BQG2 462 aa18.11■□□□□ 0.49
ERCC1-209ENST00000589214 ZNF287Q9HBT7 754 aa18.11■□□□□ 0.49
ERCC1-209ENST00000589214 MYH4Q9Y623 1939 aa18.1■□□□□ 0.49
ERCC1-209ENST00000589214 CYP2B6P20813 491 aa18.1■□□□□ 0.49
ERCC1-209ENST00000589214 COG2Q14746 738 aa18.1■□□□□ 0.49
ERCC1-209ENST00000589214 CWC27Q6UX04 472 aaKnown RBP18.1■□□□□ 0.49
ERCC1-209ENST00000589214 CENPQQ7L2Z9 268 aaPredicted RBP18.1■□□□□ 0.49
ERCC1-209ENST00000589214 PLEKHH3Q7Z736 793 aa18.1■□□□□ 0.49
ERCC1-209ENST00000589214 ZNF444Q8N0Y2 327 aaPredicted RBP18.1■□□□□ 0.49
ERCC1-209ENST00000589214 CCDC136Q96JN2 1154 aa18.1■□□□□ 0.49
ERCC1-209ENST00000589214 GOPCQ9HD26 462 aa18.1■□□□□ 0.49
ERCC1-209ENST00000589214 HMGCRP04035 888 aa18.09■□□□□ 0.49
ERCC1-209ENST00000589214 SLC3A2P08195 630 aaKnown RBP18.09■□□□□ 0.49
ERCC1-209ENST00000589214 PDE4BQ07343 736 aa18.09■□□□□ 0.49
ERCC1-209ENST00000589214 TRIB2Q92519 343 aa18.09■□□□□ 0.49
ERCC1-209ENST00000589214 ATG4CQ96DT6 458 aa18.09■□□□□ 0.49
ERCC1-209ENST00000589214 PLIN4Q96Q06 1357 aa18.08■□□□□ 0.49
ERCC1-209ENST00000589214 BRCA2P51587 3418 aa18.08■□□□□ 0.48
ERCC1-209ENST00000589214 GJB1P08034 283 aa18.08■□□□□ 0.48
ERCC1-209ENST00000589214 DSG3P32926 999 aa18.08■□□□□ 0.48
ERCC1-209ENST00000589214 CTDSPL2Q05D32 466 aa18.08■□□□□ 0.48
ERCC1-209ENST00000589214 TRIM32Q13049 653 aa18.08■□□□□ 0.48
ERCC1-209ENST00000589214 FAM83BQ5T0W9 1011 aa18.08■□□□□ 0.48
ERCC1-209ENST00000589214 NKX2-3Q8TAU0 364 aa18.08■□□□□ 0.48
ERCC1-209ENST00000589214 CEP95Q96GE4 821 aa18.08■□□□□ 0.48
ERCC1-209ENST00000589214 DIAPH3Q9NSV4 1193 aa18.08■□□□□ 0.48
ERCC1-209ENST00000589214 HOXC10Q9NYD6 342 aa18.08■□□□□ 0.48
ERCC1-209ENST00000589214 COL11A1P12107 1806 aaPredicted RBP18.07■□□□□ 0.48
ERCC1-209ENST00000589214 TNRC18O15417 2968 aaPredicted RBP18.07■□□□□ 0.48
ERCC1-209ENST00000589214 CCDC171Q6TFL3 1326 aa18.07■□□□□ 0.48
ERCC1-209ENST00000589214 IGKV6D-41A0A0C4DH26 115 aa18.07■□□□□ 0.48
ERCC1-209ENST00000589214 TSPY3P0CV98 308 aa18.07■□□□□ 0.48
ERCC1-209ENST00000589214 TSPY8P0CW00 308 aa18.07■□□□□ 0.48
ERCC1-209ENST00000589214 RGS2P41220 211 aa18.07■□□□□ 0.48
ERCC1-209ENST00000589214 GJA8P48165 433 aa18.07■□□□□ 0.48
ERCC1-209ENST00000589214 PLS1Q14651 629 aa18.07■□□□□ 0.48
ERCC1-209ENST00000589214 FAM47AQ5JRC9 791 aa18.07■□□□□ 0.48
ERCC1-209ENST00000589214 MORN1Q5T089 497 aa18.07■□□□□ 0.48
ERCC1-209ENST00000589214 TICAM2Q86XR7 235 aa18.07■□□□□ 0.48
ERCC1-209ENST00000589214 LRRC47Q8N1G4 583 aaKnown RBP18.07■□□□□ 0.48
ERCC1-209ENST00000589214 U2AF1L4Q8WU68 220 aaKnown RBP18.07■□□□□ 0.48
ERCC1-209ENST00000589214 NUP88Q99567 741 aaPredicted RBP18.07■□□□□ 0.48
ERCC1-209ENST00000589214 APBA2Q99767 749 aa18.07■□□□□ 0.48
ERCC1-209ENST00000589214 FBXO28Q9NVF7 368 aa18.07■□□□□ 0.48
ERCC1-209ENST00000589214 NYAP2Q9P242 653 aa18.07■□□□□ 0.48
ERCC1-209ENST00000589214 ZNF236Q9UL36 1845 aa18.07■□□□□ 0.48
ERCC1-209ENST00000589214 HSPD1P10809 573 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms