RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 CATIPQ7Z7H3 387 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 LCORLQ8N3X6 602 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 MARCH10Q8NA82 808 aaPredicted RBP8.49□□□□□ -1.05
ZNF540-206ENST00000589117 CCDC150Q8NCX0 1101 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 CACTINQ8WUQ7 758 aaKnown RBP8.49□□□□□ -1.05
ZNF540-206ENST00000589117 SPATA31A5Q5VU36 1347 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 SPATA31A7Q8IWB4 1347 aa8.49□□□□□ -1.05
ZNF540-206ENST00000589117 AHDC1Q5TGY3 1603 aaPredicted RBP8.48□□□□□ -1.05
ZNF540-206ENST00000589117 MINDY4BA8MYZ0 360 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 SMC2O95347 1197 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 TNNT1P13805 278 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 SCNN1AP37088 669 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 DPCR1Q3MIW9 517 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 CRACR2BQ8N4Y2 399 aaPredicted RBP8.48□□□□□ -1.05
ZNF540-206ENST00000589117 MIGA1Q8NAN2 632 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 BRIP1Q9BX63 1249 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 RNF26Q9BY78 433 aaPredicted RBP8.48□□□□□ -1.05
ZNF540-206ENST00000589117 ANKRD2Q9GZV1 360 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 GJB4Q9NTQ9 266 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 RBM28Q9NW13 759 aaKnown RBP8.48□□□□□ -1.05
ZNF540-206ENST00000589117 KCNH3Q9ULD8 1083 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 HPSEQ9Y251 543 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 ZNF804BA4D1E1 1349 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 C6orf229H3BNL8 230 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 WDHD1O75717 1129 aaPredicted RBP8.48□□□□□ -1.05
ZNF540-206ENST00000589117 FUT2Q10981 343 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 LRMPQ12912 555 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 ITPK1Q13572 414 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 PTPAQ15257 358 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 PTPN14Q15678 1187 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 NOM1Q5C9Z4 860 aaKnown RBP8.48□□□□□ -1.05
ZNF540-206ENST00000589117 DIS3L2Q8IYB7 885 aaKnown RBP8.48□□□□□ -1.05
ZNF540-206ENST00000589117 ZNF654Q8IZM8 581 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 NUP133Q8WUM0 1156 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 C16orf45Q96MC5 204 aaPredicted RBP8.48□□□□□ -1.05
ZNF540-206ENST00000589117 AIFM3Q96NN9 605 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 NLRP3Q96P20 1036 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 MAP3K14Q99558 947 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 MYL10Q9BUA6 226 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 OSBPL5Q9H0X9 879 aaPredicted RBP8.48□□□□□ -1.05
ZNF540-206ENST00000589117 TUBE1Q9UJT0 475 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 ARAP2Q8WZ64 1704 aa8.48□□□□□ -1.05
ZNF540-206ENST00000589117 BIN1O00499 593 aa8.47□□□□□ -1.05
ZNF540-206ENST00000589117 PRKAB2O43741 272 aa8.47□□□□□ -1.05
ZNF540-206ENST00000589117 RANBP6O60518 1105 aaKnown RBP8.47□□□□□ -1.05
ZNF540-206ENST00000589117 SERPINC1P01008 464 aa8.47□□□□□ -1.05
ZNF540-206ENST00000589117 SFPQP23246 707 aaKnown RBP eCLIP8.47□□□□□ -1.05
ZNF540-206ENST00000589117 MYL5Q02045 173 aa8.47□□□□□ -1.05
ZNF540-206ENST00000589117 IFIT1BQ5T764 474 aaKnown RBP8.47□□□□□ -1.05
ZNF540-206ENST00000589117 CCDC112Q8NEF3 446 aa8.47□□□□□ -1.05
ZNF540-206ENST00000589117 ROBO1Q9Y6N7 1651 aa8.47□□□□□ -1.05
ZNF540-206ENST00000589117 DOT1LQ8TEK3 1739 aa8.47□□□□□ -1.05
ZNF540-206ENST00000589117 BTBD18B2RXH4 712 aa8.47□□□□□ -1.05
ZNF540-206ENST00000589117 SNAP23O00161 211 aa8.47□□□□□ -1.05
ZNF540-206ENST00000589117 CCDC144BQ3MJ40 725 aa8.47□□□□□ -1.05
ZNF540-206ENST00000589117 SLC10A5Q5PT55 438 aa8.47□□□□□ -1.05
ZNF540-206ENST00000589117 CEP135Q66GS9 1140 aa8.47□□□□□ -1.05
ZNF540-206ENST00000589117 SPTY2D1Q68D10 685 aaPredicted RBP8.47□□□□□ -1.05
ZNF540-206ENST00000589117 SHC4Q6S5L8 630 aa8.47□□□□□ -1.05
ZNF540-206ENST00000589117 KRBA2Q6ZNG9 492 aa8.47□□□□□ -1.05
ZNF540-206ENST00000589117 ERCC4Q92889 916 aaPredicted RBP8.47□□□□□ -1.05
ZNF540-206ENST00000589117 ZSCAN10Q96SZ4 725 aaPredicted RBP8.47□□□□□ -1.05
ZNF540-206ENST00000589117 SETDB2Q96T68 719 aa8.47□□□□□ -1.05
ZNF540-206ENST00000589117 ZKSCAN3Q9BRR0 538 aa8.47□□□□□ -1.05
ZNF540-206ENST00000589117 CRNKL1Q9BZJ0 848 aaKnown RBP8.47□□□□□ -1.05
ZNF540-206ENST00000589117 INCENPQ9NQS7 918 aa8.47□□□□□ -1.05
ZNF540-206ENST00000589117 KCND1Q9NSA2 647 aa8.47□□□□□ -1.05
ZNF540-206ENST00000589117 PDS5AQ29RF7 1337 aaKnown RBP8.46□□□□□ -1.05
ZNF540-206ENST00000589117 ZPR1O75312 459 aa8.46□□□□□ -1.05
ZNF540-206ENST00000589117 GYG1P46976 350 aa8.46□□□□□ -1.05
ZNF540-206ENST00000589117 KCNJ6P48051 423 aa8.46□□□□□ -1.05
ZNF540-206ENST00000589117 RPS8P62241 208 aaKnown RBP8.46□□□□□ -1.05
ZNF540-206ENST00000589117 SEMA3FQ13275 785 aa8.46□□□□□ -1.05
ZNF540-206ENST00000589117 SYCP1Q15431 976 aa8.46□□□□□ -1.05
ZNF540-206ENST00000589117 CT47A1Q5JQC4 288 aaPredicted RBP8.46□□□□□ -1.05
ZNF540-206ENST00000589117 SWT1Q5T5J6 900 aaKnown RBP8.46□□□□□ -1.05
ZNF540-206ENST00000589117 TPTE2Q6XPS3 522 aa8.46□□□□□ -1.05
ZNF540-206ENST00000589117 TRIML1Q8N9V2 468 aa8.46□□□□□ -1.05
ZNF540-206ENST00000589117 SENP2Q9HC62 589 aa8.46□□□□□ -1.05
ZNF540-206ENST00000589117 ATP8A2Q9NTI2 1148 aa8.46□□□□□ -1.05
ZNF540-206ENST00000589117 IFNKQ9P0W0 207 aa8.46□□□□□ -1.05
ZNF540-206ENST00000589117 MINPP1Q9UNW1 487 aa8.46□□□□□ -1.05
ZNF540-206ENST00000589117 DDX60Q8IY21 1712 aaKnown RBP8.46□□□□□ -1.06
ZNF540-206ENST00000589117 TNKSO95271 1327 aa8.46□□□□□ -1.06
ZNF540-206ENST00000589117 TRIM75PA6NK02 468 aa8.46□□□□□ -1.06
ZNF540-206ENST00000589117 PTPREP23469 700 aa8.46□□□□□ -1.06
ZNF540-206ENST00000589117 UBASH3AP57075 661 aa8.46□□□□□ -1.06
ZNF540-206ENST00000589117 PDE4BQ07343 736 aa8.46□□□□□ -1.06
ZNF540-206ENST00000589117 ERFEQ4G0M1 354 aa8.46□□□□□ -1.06
ZNF540-206ENST00000589117 RC3H1Q5TC82 1133 aaKnown RBP8.46□□□□□ -1.06
ZNF540-206ENST00000589117 MLKLQ8NB16 471 aa8.46□□□□□ -1.06
ZNF540-206ENST00000589117 KIF18AQ8NI77 898 aa8.46□□□□□ -1.06
ZNF540-206ENST00000589117 PYM1Q9BRP8 204 aaKnown RBP8.46□□□□□ -1.06
ZNF540-206ENST00000589117 XPO4Q9C0E2 1151 aaKnown RBP8.46□□□□□ -1.06
ZNF540-206ENST00000589117 GNEQ9Y223 722 aaKnown RBP8.46□□□□□ -1.06
ZNF540-206ENST00000589117 SRPRBQ9Y5M8 271 aaKnown RBP8.46□□□□□ -1.06
ZNF540-206ENST00000589117 MORC2Q9Y6X9 1032 aaPredicted RBP8.46□□□□□ -1.06
ZNF540-206ENST00000589117 C4AP0C0L4 1744 aa8.46□□□□□ -1.06
ZNF540-206ENST00000589117 C4BP0C0L5 1744 aa8.46□□□□□ -1.06
ZNF540-206ENST00000589117 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 395.9 ms