RNA–Protein interactions for RNA: ENST00000589057.5

APOC4-APOC2-202, Transcript of APOC4-APOC2 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene APOC4-APOC2, Length 680 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2-202ENST00000589057 C20orf194Q5TEA3 1177 aa13.39□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 WDR78Q5VTH9 848 aa13.39□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 SIAH1Q8IUQ4 282 aa13.39□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 HAUS7Q99871 368 aa13.39□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 GDF15Q99988 308 aa13.39□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 CWC22Q9HCG8 908 aaKnown RBP13.39□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 SWAP70Q9UH65 585 aa13.39□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 ZMYND8Q9ULU4 1186 aaPredicted RBP13.39□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 ZNF236Q9UL36 1845 aa13.39□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 SOX1O00570 391 aaPredicted RBP13.38□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 GLRX3O76003 335 aaKnown RBP13.38□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 HOXC6P09630 235 aa13.38□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 AKR1B1P15121 316 aa13.38□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 GRB14Q14449 540 aa13.38□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 COG2Q14746 738 aa13.38□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 TMEM179Q6ZVK1 233 aa13.38□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 CLEC10AQ8IUN9 316 aa13.38□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 NPLOC4Q8TAT6 608 aa13.38□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 CHMP4BQ9H444 224 aaKnown RBP13.38□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 ATP8A2Q9NTI2 1148 aa13.38□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 CYP2D7A0A087X1C5 515 aa13.37□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 SMARCA5O60264 1052 aaPredicted RBP13.37□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 IGHA2P01877 340 aa13.37□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 SYN1P17600 705 aa13.37□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 C12orf60Q5U649 245 aa13.37□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 MOV10L1Q9BXT6 1211 aaKnown RBP13.37□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.37□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 HOXC10Q9NYD6 342 aa13.37□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 IVNS1ABPQ9Y6Y0 642 aa13.37□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 USP17L12C9JPN9 530 aa13.36□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 USP17L21D6R901 530 aa13.36□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 BMP8BP34820 402 aa13.36□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 CDK8P49336 464 aa13.36□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 ICA1Q05084 483 aa13.36□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 UBE3CQ15386 1083 aa13.36□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 MFSD14CQ5VZR4 134 aa13.36□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 LRRCC1Q9C099 1032 aa13.36□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 TANGO6Q9C0B7 1094 aa13.36□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 SPATC1LQ9H0A9 340 aa13.36□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 TMX2Q9Y320 296 aa13.36□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 COL11A1P12107 1806 aaPredicted RBP13.36□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 DSG3P32926 999 aa13.35□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 CYP2C19P33261 490 aa13.35□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 ATP2B2Q01814 1243 aa13.35□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 LRRC26Q2I0M4 334 aa13.35□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 C16orf86Q6ZW13 317 aa13.35□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 SPICE1Q8N0Z3 855 aa13.35□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 TRPV1Q8NER1 839 aa13.35□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 LPAR1Q92633 364 aa13.35□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 LRCH3Q96II8 777 aa13.35□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 CCDC17Q96LX7 622 aa13.35□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 PUS7LQ9H0K6 701 aaKnown RBP13.35□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 VCPKMTQ9H867 229 aa13.35□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 ARHGEF10LQ9HCE6 1279 aa13.35□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 SLC4A4Q9Y6R1 1079 aa13.35□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 GREB1LQ9C091 1923 aaPredicted RBP13.35□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 STRNO43815 780 aa13.34□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 FLOT1O75955 427 aa13.34□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 ERCC3P19447 782 aa13.34□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 ADORA2AP29274 412 aa13.34□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 MAGEA10P43363 369 aaPredicted RBP13.34□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 CTR9Q6PD62 1173 aa13.34□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 SHCBP1Q8NEM2 672 aa13.34□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 ATG4CQ96DT6 458 aa13.34□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 DDX20Q9UHI6 824 aaKnown RBP13.34□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 ZNFX1Q9P2E3 1918 aaKnown RBP13.34□□□□□ -0.27
APOC4-APOC2-202ENST00000589057 COBLO75128 1261 aa13.33□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 CYBAP13498 195 aa13.33□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 EEF2P13639 858 aaKnown RBP13.33□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 CNGA1P29973 690 aa13.33□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 OLFML2BQ68BL8 750 aa13.33□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 ZSCAN25Q6NSZ9 544 aa13.33□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 DPP9Q86TI2 863 aa13.33□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 AMOTL1Q8IY63 956 aa13.33□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 MB21D1Q8N884 522 aa13.33□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 SH2D4AQ9H788 454 aa13.33□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 LAMA3Q16787 3333 aa13.33□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 WDR46O15213 610 aaKnown RBP13.32□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 MSCO60682 206 aa13.32□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 DDRGK1Q96HY6 314 aa13.32□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 STRBPQ96SI9 672 aaKnown RBP13.32□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.32□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 SENP6Q9GZR1 1112 aaPredicted RBP13.32□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 MROH8Q9H579 483 aa13.32□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 DCTPP1Q9H773 170 aa13.32□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 ECHDC1Q9NTX5 307 aa13.32□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 FBXO28Q9NVF7 368 aa13.32□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 ADAMTS5Q9UNA0 930 aa13.32□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 GSG1L2A8MUP6 293 aa13.31□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 PLS1Q14651 629 aa13.31□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 TMEM132BQ14DG7 1078 aa13.31□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 SAMD1Q6SPF0 538 aaPredicted RBP13.31□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 NCAPG2Q86XI2 1143 aa13.31□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 KBTBD3Q8NAB2 608 aa13.31□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 KANSL2Q9H9L4 492 aa13.31□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 ARPP21Q9UBL0 812 aaPredicted RBP13.31□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 PLXNA1Q9UIW2 1896 aa13.31□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 DNM1LO00429 736 aa13.3□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 SBK1Q52WX2 424 aa13.3□□□□□ -0.28
APOC4-APOC2-202ENST00000589057 PRAMEF19Q5SWL8 479 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms