RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 TDO2P48775 406 aa13.82□□□□□ -0.2
RFX1-204ENST00000588885 UBXN2AP68543 259 aa13.82□□□□□ -0.2
RFX1-204ENST00000588885 ICA1Q05084 483 aa13.82□□□□□ -0.2
RFX1-204ENST00000588885 LRRFIP1Q32MZ4 808 aaKnown RBP13.82□□□□□ -0.2
RFX1-204ENST00000588885 CCDC129Q6ZRS4 1044 aa13.82□□□□□ -0.2
RFX1-204ENST00000588885 SKAP1Q86WV1 359 aa13.82□□□□□ -0.2
RFX1-204ENST00000588885 SPICE1Q8N0Z3 855 aa13.82□□□□□ -0.2
RFX1-204ENST00000588885 SLAIN1Q8ND83 568 aa13.82□□□□□ -0.2
RFX1-204ENST00000588885 C12orf42Q96LP6 360 aa13.82□□□□□ -0.2
RFX1-204ENST00000588885 UNC93B1Q9H1C4 597 aa13.82□□□□□ -0.2
RFX1-204ENST00000588885 PORCNQ9H237 461 aa13.82□□□□□ -0.2
RFX1-204ENST00000588885 MKNK2Q9HBH9 465 aa13.82□□□□□ -0.2
RFX1-204ENST00000588885 SALL3Q9BXA9 1300 aa13.82□□□□□ -0.2
RFX1-204ENST00000588885 MYH8P13535 1937 aa13.82□□□□□ -0.2
RFX1-204ENST00000588885 LOC285556D6RIA3 1793 aa13.81□□□□□ -0.2
RFX1-204ENST00000588885 PATL2C9JE40 543 aaKnown RBP13.81□□□□□ -0.2
RFX1-204ENST00000588885 CNMDO75829 334 aa13.81□□□□□ -0.2
RFX1-204ENST00000588885 INHAP05111 366 aa13.81□□□□□ -0.2
RFX1-204ENST00000588885 CYP2B6P20813 491 aa13.81□□□□□ -0.2
RFX1-204ENST00000588885 PDE1AP54750 535 aa13.81□□□□□ -0.2
RFX1-204ENST00000588885 ERVK-9P63128 1117 aa13.81□□□□□ -0.2
RFX1-204ENST00000588885 ERVK-24P63145 666 aa13.81□□□□□ -0.2
RFX1-204ENST00000588885 WDR78Q5VTH9 848 aa13.81□□□□□ -0.2
RFX1-204ENST00000588885 SMC5Q8IY18 1101 aa13.81□□□□□ -0.2
RFX1-204ENST00000588885 CCDC17Q96LX7 622 aa13.81□□□□□ -0.2
RFX1-204ENST00000588885 TANGO6Q9C0B7 1094 aa13.81□□□□□ -0.2
RFX1-204ENST00000588885 CWC22Q9HCG8 908 aaKnown RBP13.81□□□□□ -0.2
RFX1-204ENST00000588885 EPB41L4AQ9HCS5 686 aaPredicted RBP13.81□□□□□ -0.2
RFX1-204ENST00000588885 ARPP21Q9UBL0 812 aaPredicted RBP13.81□□□□□ -0.2
RFX1-204ENST00000588885 STAP2Q9UGK3 403 aa13.81□□□□□ -0.2
RFX1-204ENST00000588885 GJD2Q9UKL4 321 aa13.81□□□□□ -0.2
RFX1-204ENST00000588885 PRDM1O75626 825 aa13.8□□□□□ -0.2
RFX1-204ENST00000588885 EEF2P13639 858 aaKnown RBP13.8□□□□□ -0.2
RFX1-204ENST00000588885 GNAT2P19087 354 aa13.8□□□□□ -0.2
RFX1-204ENST00000588885 IRF5Q13568 498 aa13.8□□□□□ -0.2
RFX1-204ENST00000588885 SBK1Q52WX2 424 aa13.8□□□□□ -0.2
RFX1-204ENST00000588885 ZMYM1Q5SVZ6 1142 aa13.8□□□□□ -0.2
RFX1-204ENST00000588885 GIMAP6Q6P9H5 292 aa13.8□□□□□ -0.2
RFX1-204ENST00000588885 IFNL3Q8IZI9 196 aa13.8□□□□□ -0.2
RFX1-204ENST00000588885 ARHGEF10LQ9HCE6 1279 aa13.8□□□□□ -0.2
RFX1-204ENST00000588885 SPDYE16A6NNV3 312 aaPredicted RBP13.79□□□□□ -0.2
RFX1-204ENST00000588885 TRIM6-TRIM34B2RNG4 842 aa13.79□□□□□ -0.2
RFX1-204ENST00000588885 RASA1P20936 1047 aa13.79□□□□□ -0.2
RFX1-204ENST00000588885 TRIM32Q13049 653 aa13.79□□□□□ -0.2
RFX1-204ENST00000588885 PXYLP1Q8TE99 480 aa13.79□□□□□ -0.2
RFX1-204ENST00000588885 EVI5LQ96CN4 794 aa13.79□□□□□ -0.2
RFX1-204ENST00000588885 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.79□□□□□ -0.2
RFX1-204ENST00000588885 NACAP1Q9BZK3 213 aa13.79□□□□□ -0.2
RFX1-204ENST00000588885 KANSL2Q9H9L4 492 aa13.79□□□□□ -0.2
RFX1-204ENST00000588885 BTBD7Q9P203 1132 aa13.79□□□□□ -0.2
RFX1-204ENST00000588885 TMX2Q9Y320 296 aa13.79□□□□□ -0.2
RFX1-204ENST00000588885 RABGAP1Q9Y3P9 1069 aa13.79□□□□□ -0.2
RFX1-204ENST00000588885 MAPK4P31152 587 aa13.78□□□□□ -0.2
RFX1-204ENST00000588885 COG2Q14746 738 aa13.78□□□□□ -0.2
RFX1-204ENST00000588885 GPR142Q7Z601 462 aa13.78□□□□□ -0.2
RFX1-204ENST00000588885 PLEKHH3Q7Z736 793 aa13.78□□□□□ -0.2
RFX1-204ENST00000588885 CHD1LQ86WJ1 897 aa13.78□□□□□ -0.2
RFX1-204ENST00000588885 ZNF444Q8N0Y2 327 aaPredicted RBP13.78□□□□□ -0.2
RFX1-204ENST00000588885 NKX2-3Q8TAU0 364 aa13.78□□□□□ -0.2
RFX1-204ENST00000588885 GTF3C2Q8WUA4 911 aaPredicted RBP13.78□□□□□ -0.2
RFX1-204ENST00000588885 RILPL2Q969X0 211 aa13.78□□□□□ -0.2
RFX1-204ENST00000588885 NUDT12Q9BQG2 462 aa13.78□□□□□ -0.2
RFX1-204ENST00000588885 FOXD4L1Q9NU39 408 aa13.78□□□□□ -0.2
RFX1-204ENST00000588885 HOXC10Q9NYD6 342 aa13.78□□□□□ -0.2
RFX1-204ENST00000588885 NAV1Q8NEY1 1877 aa13.78□□□□□ -0.2
RFX1-204ENST00000588885 FLOT1O75955 427 aa13.77□□□□□ -0.21
RFX1-204ENST00000588885 TFRCP02786 760 aaKnown RBP13.77□□□□□ -0.21
RFX1-204ENST00000588885 GJB1P08034 283 aa13.77□□□□□ -0.21
RFX1-204ENST00000588885 CCNA1P78396 465 aa13.77□□□□□ -0.21
RFX1-204ENST00000588885 NUCB1Q02818 461 aa13.77□□□□□ -0.21
RFX1-204ENST00000588885 PLS1Q14651 629 aa13.77□□□□□ -0.21
RFX1-204ENST00000588885 VPS53Q5VIR6 699 aa13.77□□□□□ -0.21
RFX1-204ENST00000588885 DPF3Q92784 378 aa13.77□□□□□ -0.21
RFX1-204ENST00000588885 SHISA4Q96DD7 197 aa13.77□□□□□ -0.21
RFX1-204ENST00000588885 FAM227BQ96M60 508 aa13.77□□□□□ -0.21
RFX1-204ENST00000588885 DEFB118Q96PH6 123 aa13.77□□□□□ -0.21
RFX1-204ENST00000588885 NAPBQ9H115 298 aa13.77□□□□□ -0.21
RFX1-204ENST00000588885 SH2D4AQ9H788 454 aa13.77□□□□□ -0.21
RFX1-204ENST00000588885 VCPKMTQ9H867 229 aa13.77□□□□□ -0.21
RFX1-204ENST00000588885 INCENPQ9NQS7 918 aa13.77□□□□□ -0.21
RFX1-204ENST00000588885 CEP290O15078 2479 aa13.76□□□□□ -0.21
RFX1-204ENST00000588885 DDX60LQ5H9U9 1706 aaKnown RBP13.76□□□□□ -0.21
RFX1-204ENST00000588885 GJA8P48165 433 aa13.76□□□□□ -0.21
RFX1-204ENST00000588885 FAM47AQ5JRC9 791 aa13.76□□□□□ -0.21
RFX1-204ENST00000588885 U2AF1L4Q8WU68 220 aaKnown RBP13.76□□□□□ -0.21
RFX1-204ENST00000588885 TRIB2Q92519 343 aa13.76□□□□□ -0.21
RFX1-204ENST00000588885 CHMP4CQ96CF2 233 aa13.76□□□□□ -0.21
RFX1-204ENST00000588885 ATG4CQ96DT6 458 aa13.76□□□□□ -0.21
RFX1-204ENST00000588885 CLIP2Q9UDT6 1046 aa13.76□□□□□ -0.21
RFX1-204ENST00000588885 BAZ2AQ9UIF9 1905 aaKnown RBP13.75□□□□□ -0.21
RFX1-204ENST00000588885 FOXP2O15409 715 aa13.75□□□□□ -0.21
RFX1-204ENST00000588885 SGPL1O95470 568 aa13.75□□□□□ -0.21
RFX1-204ENST00000588885 HMGCRP04035 888 aa13.75□□□□□ -0.21
RFX1-204ENST00000588885 CTDSPL2Q05D32 466 aa13.75□□□□□ -0.21
RFX1-204ENST00000588885 PPARAQ07869 468 aa13.75□□□□□ -0.21
RFX1-204ENST00000588885 CCL14Q16627 93 aa13.75□□□□□ -0.21
RFX1-204ENST00000588885 MORN1Q5T089 497 aa13.75□□□□□ -0.21
RFX1-204ENST00000588885 FAM83BQ5T0W9 1011 aa13.75□□□□□ -0.21
RFX1-204ENST00000588885 LBX2Q6XYB7 198 aa13.75□□□□□ -0.21
RFX1-204ENST00000588885 PLEKHM2Q8IWE5 1019 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms