RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 GJB1P08034 283 aa17.25■□□□□ 0.35
DDX39A-208ENST00000588692 POTEEQ6S8J3 1075 aa17.25■□□□□ 0.35
DDX39A-208ENST00000588692 CLEC10AQ8IUN9 316 aa17.25■□□□□ 0.35
DDX39A-208ENST00000588692 SIAH1Q8IUQ4 282 aa17.25■□□□□ 0.35
DDX39A-208ENST00000588692 SEC62Q99442 399 aaKnown RBP17.25■□□□□ 0.35
DDX39A-208ENST00000588692 TANGO6Q9C0B7 1094 aa17.25■□□□□ 0.35
DDX39A-208ENST00000588692 RNF208Q9H0X6 261 aa17.25■□□□□ 0.35
DDX39A-208ENST00000588692 VCPKMTQ9H867 229 aa17.25■□□□□ 0.35
DDX39A-208ENST00000588692 MKNK2Q9HBH9 465 aa17.25■□□□□ 0.35
DDX39A-208ENST00000588692 SUPT16HQ9Y5B9 1047 aaKnown RBP17.25■□□□□ 0.35
DDX39A-208ENST00000588692 PARP14Q460N5 1801 aa17.25■□□□□ 0.35
DDX39A-208ENST00000588692 CAPN2P17655 700 aa17.24■□□□□ 0.35
DDX39A-208ENST00000588692 RASA1P20936 1047 aa17.24■□□□□ 0.35
DDX39A-208ENST00000588692 GJA8P48165 433 aa17.24■□□□□ 0.35
DDX39A-208ENST00000588692 COG2Q14746 738 aa17.24■□□□□ 0.35
DDX39A-208ENST00000588692 Q3C1V9 767 aa17.24■□□□□ 0.35
DDX39A-208ENST00000588692 CHD1LQ86WJ1 897 aa17.24■□□□□ 0.35
DDX39A-208ENST00000588692 NUDT12Q9BQG2 462 aa17.24■□□□□ 0.35
DDX39A-208ENST00000588692 NAPBQ9H115 298 aa17.24■□□□□ 0.35
DDX39A-208ENST00000588692 HOXC10Q9NYD6 342 aa17.24■□□□□ 0.35
DDX39A-208ENST00000588692 WDR46O15213 610 aaKnown RBP17.24■□□□□ 0.35
DDX39A-208ENST00000588692 PEX10O60683 326 aa17.24■□□□□ 0.35
DDX39A-208ENST00000588692 CNMDO75829 334 aa17.24■□□□□ 0.35
DDX39A-208ENST00000588692 HMGCRP04035 888 aa17.24■□□□□ 0.35
DDX39A-208ENST00000588692 EEF2P13639 858 aaKnown RBP17.24■□□□□ 0.35
DDX39A-208ENST00000588692 NUCB1Q02818 461 aa17.24■□□□□ 0.35
DDX39A-208ENST00000588692 PRPF38BQ5VTL8 546 aaKnown RBP17.24■□□□□ 0.35
DDX39A-208ENST00000588692 GPR142Q7Z601 462 aa17.24■□□□□ 0.35
DDX39A-208ENST00000588692 PLEKHH3Q7Z736 793 aa17.24■□□□□ 0.35
DDX39A-208ENST00000588692 PORCNQ9H237 461 aa17.24■□□□□ 0.35
DDX39A-208ENST00000588692 HELLSQ9NRZ9 838 aa17.24■□□□□ 0.35
DDX39A-208ENST00000588692 IGHDP01880 384 aa17.23■□□□□ 0.35
DDX39A-208ENST00000588692 SLC3A2P08195 630 aaKnown RBP17.23■□□□□ 0.35
DDX39A-208ENST00000588692 XRCC5P13010 732 aaKnown RBP17.23■□□□□ 0.35
DDX39A-208ENST00000588692 B4GALNT3Q6L9W6 998 aa17.23■□□□□ 0.35
DDX39A-208ENST00000588692 TRMT44Q8IYL2 757 aaKnown RBP17.23■□□□□ 0.35
DDX39A-208ENST00000588692 MB21D1Q8N884 522 aa17.23■□□□□ 0.35
DDX39A-208ENST00000588692 SHISA4Q96DD7 197 aa17.23■□□□□ 0.35
DDX39A-208ENST00000588692 UNC93B1Q9H1C4 597 aa17.23■□□□□ 0.35
DDX39A-208ENST00000588692 CWC22Q9HCG8 908 aaKnown RBP17.23■□□□□ 0.35
DDX39A-208ENST00000588692 GOPCQ9HD26 462 aa17.23■□□□□ 0.35
DDX39A-208ENST00000588692 MKI67P46013 3256 aaKnown RBP17.23■□□□□ 0.35
DDX39A-208ENST00000588692 MYH4Q9Y623 1939 aa17.22■□□□□ 0.35
DDX39A-208ENST00000588692 RGS2P41220 211 aa17.22■□□□□ 0.35
DDX39A-208ENST00000588692 ATP2B2Q01814 1243 aa17.22■□□□□ 0.35
DDX39A-208ENST00000588692 PDE4BQ07343 736 aa17.22■□□□□ 0.35
DDX39A-208ENST00000588692 KIAA1755Q5JYT7 1200 aa17.22■□□□□ 0.35
DDX39A-208ENST00000588692 SPICE1Q8N0Z3 855 aa17.22■□□□□ 0.35
DDX39A-208ENST00000588692 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.22■□□□□ 0.35
DDX39A-208ENST00000588692 OSBPL3Q9H4L5 887 aa17.22■□□□□ 0.35
DDX39A-208ENST00000588692 BTBD7Q9P203 1132 aa17.22■□□□□ 0.35
DDX39A-208ENST00000588692 ZNF236Q9UL36 1845 aa17.21■□□□□ 0.35
DDX39A-208ENST00000588692 FLOT1O75955 427 aa17.21■□□□□ 0.35
DDX39A-208ENST00000588692 DSG3P32926 999 aa17.21■□□□□ 0.35
DDX39A-208ENST00000588692 PPARAQ07869 468 aa17.21■□□□□ 0.35
DDX39A-208ENST00000588692 MORN1Q5T089 497 aa17.21■□□□□ 0.35
DDX39A-208ENST00000588692 ZNF444Q8N0Y2 327 aaPredicted RBP17.21■□□□□ 0.35
DDX39A-208ENST00000588692 U2AF1L4Q8WU68 220 aaKnown RBP17.21■□□□□ 0.35
DDX39A-208ENST00000588692 USP6NLQ92738 828 aa17.21■□□□□ 0.35
DDX39A-208ENST00000588692 APBA2Q99767 749 aa17.21■□□□□ 0.35
DDX39A-208ENST00000588692 PAK6Q9NQU5 681 aaPredicted RBP17.21■□□□□ 0.35
DDX39A-208ENST00000588692 NYAP2Q9P242 653 aa17.21■□□□□ 0.35
DDX39A-208ENST00000588692 PLIN4Q96Q06 1357 aa17.21■□□□□ 0.35
DDX39A-208ENST00000588692 TRIM6-TRIM34B2RNG4 842 aa17.2■□□□□ 0.34
DDX39A-208ENST00000588692 CYP2B6P20813 491 aa17.2■□□□□ 0.34
DDX39A-208ENST00000588692 PLEKHM2Q8IWE5 1019 aa17.2■□□□□ 0.34
DDX39A-208ENST00000588692 STK11IPQ8N1F8 1099 aa17.2■□□□□ 0.34
DDX39A-208ENST00000588692 TRIB2Q92519 343 aa17.2■□□□□ 0.34
DDX39A-208ENST00000588692 SYNPO2Q9UMS6 1093 aa17.2■□□□□ 0.34
DDX39A-208ENST00000588692 IVNS1ABPQ9Y6Y0 642 aa17.2■□□□□ 0.34
DDX39A-208ENST00000588692 IGKV6D-41A0A0C4DH26 115 aa17.19■□□□□ 0.34
DDX39A-208ENST00000588692 SLC15A5A6NIM6 579 aa17.19■□□□□ 0.34
DDX39A-208ENST00000588692 FOXP2O15409 715 aa17.19■□□□□ 0.34
DDX39A-208ENST00000588692 SGPL1O95470 568 aa17.19■□□□□ 0.34
DDX39A-208ENST00000588692 ZKSCAN1P17029 563 aaPredicted RBP17.19■□□□□ 0.34
DDX39A-208ENST00000588692 MCMDC2Q4G0Z9 681 aa17.19■□□□□ 0.34
DDX39A-208ENST00000588692 WDR78Q5VTH9 848 aa17.19■□□□□ 0.34
DDX39A-208ENST00000588692 CCDC129Q6ZRS4 1044 aa17.19■□□□□ 0.34
DDX39A-208ENST00000588692 SHCBP1Q8NEM2 672 aa17.19■□□□□ 0.34
DDX39A-208ENST00000588692 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.19■□□□□ 0.349e-7■■■□□ 19
DDX39A-208ENST00000588692 COL11A1P12107 1806 aaPredicted RBP17.19■□□□□ 0.34
DDX39A-208ENST00000588692 RPTORQ8N122 1335 aa17.18■□□□□ 0.34
DDX39A-208ENST00000588692 PRDM1O75626 825 aa17.18■□□□□ 0.34
DDX39A-208ENST00000588692 PTPREP23469 700 aa17.18■□□□□ 0.34
DDX39A-208ENST00000588692 MAP2K5Q13163 448 aa17.18■□□□□ 0.34
DDX39A-208ENST00000588692 SPATC1LQ9H0A9 340 aa17.18■□□□□ 0.34
DDX39A-208ENST00000588692 HMX1Q9NP08 348 aaPredicted RBP17.18■□□□□ 0.34
DDX39A-208ENST00000588692 ZMYM6O95789 1325 aa17.18■□□□□ 0.34
DDX39A-208ENST00000588692 A0A0D9SFI3 127 aa17.18■□□□□ 0.34
DDX39A-208ENST00000588692 TSPY3P0CV98 308 aa17.18■□□□□ 0.34
DDX39A-208ENST00000588692 TSPY8P0CW00 308 aa17.18■□□□□ 0.34
DDX39A-208ENST00000588692 GRB14Q14449 540 aa17.18■□□□□ 0.34
DDX39A-208ENST00000588692 ALX1Q15699 326 aa17.18■□□□□ 0.34
DDX39A-208ENST00000588692 PPP4R3BQ5MIZ7 849 aa17.18■□□□□ 0.34
DDX39A-208ENST00000588692 MAP3K21Q5TCX8 1036 aa17.18■□□□□ 0.34
DDX39A-208ENST00000588692 NEDD1Q8NHV4 660 aa17.18■□□□□ 0.34
DDX39A-208ENST00000588692 RILPL2Q969X0 211 aa17.18■□□□□ 0.34
DDX39A-208ENST00000588692 ATG4CQ96DT6 458 aa17.18■□□□□ 0.34
DDX39A-208ENST00000588692 FAM227BQ96M60 508 aa17.18■□□□□ 0.34
DDX39A-208ENST00000588692 DEFB118Q96PH6 123 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms