RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 CNMDO75829 334 aa21.14■□□□□ 0.97
TPM4-206ENST00000587201 NKX2-3Q8TAU0 364 aa21.14■□□□□ 0.97
TPM4-206ENST00000587201 NUDT12Q9BQG2 462 aa21.14■□□□□ 0.97
TPM4-206ENST00000587201 PORCNQ9H237 461 aa21.14■□□□□ 0.97
TPM4-206ENST00000587201 ROBO3Q96MS0 1386 aa21.13■□□□□ 0.97
TPM4-206ENST00000587201 SPDYE16A6NNV3 312 aaPredicted RBP21.13■□□□□ 0.97
TPM4-206ENST00000587201 EEF2P13639 858 aaKnown RBP21.13■□□□□ 0.97
TPM4-206ENST00000587201 RASA1P20936 1047 aa21.13■□□□□ 0.97
TPM4-206ENST00000587201 CCNA1P78396 465 aa21.13■□□□□ 0.97
TPM4-206ENST00000587201 KIAA1755Q5JYT7 1200 aa21.13■□□□□ 0.97
TPM4-206ENST00000587201 LBX2Q6XYB7 198 aa21.13■□□□□ 0.97
TPM4-206ENST00000587201 CHD1LQ86WJ1 897 aa21.13■□□□□ 0.97
TPM4-206ENST00000587201 SPICE1Q8N0Z3 855 aa21.13■□□□□ 0.97
TPM4-206ENST00000587201 LPAR1Q92633 364 aa21.13■□□□□ 0.97
TPM4-206ENST00000587201 UNC93B1Q9H1C4 597 aa21.13■□□□□ 0.97
TPM4-206ENST00000587201 VCPKMTQ9H867 229 aa21.13■□□□□ 0.97
TPM4-206ENST00000587201 ZNF287Q9HBT7 754 aa21.13■□□□□ 0.97
TPM4-206ENST00000587201 TNRC18O15417 2968 aaPredicted RBP21.12■□□□□ 0.97
TPM4-206ENST00000587201 GJB1P08034 283 aa21.12■□□□□ 0.97
TPM4-206ENST00000587201 CYP2B6P20813 491 aa21.12■□□□□ 0.97
TPM4-206ENST00000587201 COG2Q14746 738 aa21.12■□□□□ 0.97
TPM4-206ENST00000587201 CCDC129Q6ZRS4 1044 aa21.12■□□□□ 0.97
TPM4-206ENST00000587201 GPR142Q7Z601 462 aa21.12■□□□□ 0.97
TPM4-206ENST00000587201 PLEKHH3Q7Z736 793 aa21.12■□□□□ 0.97
TPM4-206ENST00000587201 ZNF444Q8N0Y2 327 aaPredicted RBP21.12■□□□□ 0.97
TPM4-206ENST00000587201 SOCS4Q8WXH5 440 aa21.12■□□□□ 0.97
TPM4-206ENST00000587201 NAPBQ9H115 298 aa21.12■□□□□ 0.97
TPM4-206ENST00000587201 HOXC10Q9NYD6 342 aa21.12■□□□□ 0.97
TPM4-206ENST00000587201 BTBD7Q9P203 1132 aa21.12■□□□□ 0.97
TPM4-206ENST00000587201 TRIM6-TRIM34B2RNG4 842 aa21.11■□□□□ 0.97
TPM4-206ENST00000587201 RAD21O60216 631 aa21.11■□□□□ 0.97
TPM4-206ENST00000587201 GJA8P48165 433 aa21.11■□□□□ 0.97
TPM4-206ENST00000587201 WDR78Q5VTH9 848 aa21.11■□□□□ 0.97
TPM4-206ENST00000587201 PDE4DIPQ5VU43 2346 aa21.11■□□□□ 0.97
TPM4-206ENST00000587201 WDR46O15213 610 aaKnown RBP21.1■□□□□ 0.97
TPM4-206ENST00000587201 PRDM1O75626 825 aa21.1■□□□□ 0.97
TPM4-206ENST00000587201 FLOT1O75955 427 aa21.1■□□□□ 0.97
TPM4-206ENST00000587201 HMGCRP04035 888 aa21.1■□□□□ 0.97
TPM4-206ENST00000587201 NUCB1Q02818 461 aa21.1■□□□□ 0.97
TPM4-206ENST00000587201 SHISA4Q96DD7 197 aa21.1■□□□□ 0.97
TPM4-206ENST00000587201 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.1■□□□□ 0.97
TPM4-206ENST00000587201 GOPCQ9HD26 462 aa21.1■□□□□ 0.97
TPM4-206ENST00000587201 SLC3A2P08195 630 aaKnown RBP21.09■□□□□ 0.97
TPM4-206ENST00000587201 DSG3P32926 999 aa21.09■□□□□ 0.97
TPM4-206ENST00000587201 PPARAQ07869 468 aa21.09■□□□□ 0.97
TPM4-206ENST00000587201 PRPF38BQ5VTL8 546 aaKnown RBP21.09■□□□□ 0.97
TPM4-206ENST00000587201 SAMD1Q6SPF0 538 aaPredicted RBP21.09■□□□□ 0.97
TPM4-206ENST00000587201 U2AF1L4Q8WU68 220 aaKnown RBP21.09■□□□□ 0.97
TPM4-206ENST00000587201 RILPL2Q969X0 211 aa21.09■□□□□ 0.97
TPM4-206ENST00000587201 HELLSQ9NRZ9 838 aa21.09■□□□□ 0.97
TPM4-206ENST00000587201 RGS2P41220 211 aa21.08■□□□□ 0.97
TPM4-206ENST00000587201 PDE4BQ07343 736 aa21.08■□□□□ 0.97
TPM4-206ENST00000587201 MORN1Q5T089 497 aa21.08■□□□□ 0.97
TPM4-206ENST00000587201 TRIB2Q92519 343 aa21.08■□□□□ 0.97
TPM4-206ENST00000587201 PLXNB2O15031 1838 aa21.08■□□□□ 0.96
TPM4-206ENST00000587201 SGPL1O95470 568 aa21.07■□□□□ 0.96
TPM4-206ENST00000587201 XRCC5P13010 732 aaKnown RBP21.07■□□□□ 0.96
TPM4-206ENST00000587201 IRX6P78412 446 aaPredicted RBP21.07■□□□□ 0.96
TPM4-206ENST00000587201 TRIM32Q13049 653 aa21.07■□□□□ 0.96
TPM4-206ENST00000587201 PLEKHM2Q8IWE5 1019 aa21.07■□□□□ 0.96
TPM4-206ENST00000587201 MB21D1Q8N884 522 aa21.07■□□□□ 0.96
TPM4-206ENST00000587201 DEFB118Q96PH6 123 aa21.07■□□□□ 0.96
TPM4-206ENST00000587201 NYAP2Q9P242 653 aa21.07■□□□□ 0.96
TPM4-206ENST00000587201 IVNS1ABPQ9Y6Y0 642 aa21.07■□□□□ 0.96
TPM4-206ENST00000587201 MAP2K5Q13163 448 aa21.06■□□□□ 0.96
TPM4-206ENST00000587201 MCMDC2Q4G0Z9 681 aa21.06■□□□□ 0.96
TPM4-206ENST00000587201 VPS53Q5VIR6 699 aa21.06■□□□□ 0.96
TPM4-206ENST00000587201 TICAM2Q86XR7 235 aa21.06■□□□□ 0.96
TPM4-206ENST00000587201 TRMT44Q8IYL2 757 aaKnown RBP21.06■□□□□ 0.96
TPM4-206ENST00000587201 USP6NLQ92738 828 aa21.06■□□□□ 0.96
TPM4-206ENST00000587201 ATG4CQ96DT6 458 aa21.06■□□□□ 0.96
TPM4-206ENST00000587201 FAM227BQ96M60 508 aa21.06■□□□□ 0.96
TPM4-206ENST00000587201 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.06■□□□□ 0.963e-6■■■■■ 31.9
TPM4-206ENST00000587201 PAK6Q9NQU5 681 aaPredicted RBP21.06■□□□□ 0.96
TPM4-206ENST00000587201 CLIP2Q9UDT6 1046 aa21.06■□□□□ 0.96
TPM4-206ENST00000587201 A0A0D9SFI3 127 aa21.05■□□□□ 0.96
TPM4-206ENST00000587201 FOXP2O15409 715 aa21.05■□□□□ 0.96
TPM4-206ENST00000587201 TFRCP02786 760 aaKnown RBP21.05■□□□□ 0.96
TPM4-206ENST00000587201 TSPY3P0CV98 308 aa21.05■□□□□ 0.96
TPM4-206ENST00000587201 TSPY8P0CW00 308 aa21.05■□□□□ 0.96
TPM4-206ENST00000587201 ZKSCAN1P17029 563 aaPredicted RBP21.05■□□□□ 0.96
TPM4-206ENST00000587201 PTPREP23469 700 aa21.05■□□□□ 0.96
TPM4-206ENST00000587201 PLS1Q14651 629 aa21.05■□□□□ 0.96
TPM4-206ENST00000587201 FAM83BQ5T0W9 1011 aa21.05■□□□□ 0.96
TPM4-206ENST00000587201 APBA2Q99767 749 aa21.05■□□□□ 0.96
TPM4-206ENST00000587201 MOV10L1Q9BXT6 1211 aaKnown RBP21.05■□□□□ 0.96
TPM4-206ENST00000587201 SPATC1LQ9H0A9 340 aa21.05■□□□□ 0.96
TPM4-206ENST00000587201 OSBPL3Q9H4L5 887 aa21.05■□□□□ 0.96
TPM4-206ENST00000587201 HMX1Q9NP08 348 aaPredicted RBP21.05■□□□□ 0.96
TPM4-206ENST00000587201 GREB1LQ9C091 1923 aaPredicted RBP21.05■□□□□ 0.96
TPM4-206ENST00000587201 RPTORQ8N122 1335 aa21.04■□□□□ 0.96
TPM4-206ENST00000587201 IGKV6D-41A0A0C4DH26 115 aa21.04■□□□□ 0.96
TPM4-206ENST00000587201 SLC15A5A6NIM6 579 aa21.04■□□□□ 0.96
TPM4-206ENST00000587201 NMIQ13287 307 aaPredicted RBP21.04■□□□□ 0.96
TPM4-206ENST00000587201 FAM47AQ5JRC9 791 aa21.04■□□□□ 0.96
TPM4-206ENST00000587201 CEP95Q96GE4 821 aa21.04■□□□□ 0.96
TPM4-206ENST00000587201 MKI67P46013 3256 aaKnown RBP21.04■□□□□ 0.96
TPM4-206ENST00000587201 F5H6K3 240 aa21.03■□□□□ 0.96
TPM4-206ENST00000587201 CAPN2P17655 700 aa21.03■□□□□ 0.96
TPM4-206ENST00000587201 TFAP4Q01664 338 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms