RNA–Protein interactions for RNA: ENST00000585313.5

IFT20-215, Transcript of intraflagellar transport 20, humanhuman

APPRIS P4 TSL 3 BASIC

Gene IFT20, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-215ENST00000585313 FOXD4L3Q6VB84 417 aaPredicted RBP19.22■□□□□ 0.67
IFT20-215ENST00000585313 FAM177A1Q8N128 213 aaPredicted RBP19.22■□□□□ 0.67
IFT20-215ENST00000585313 CHAMP1Q96JM3 812 aa19.22■□□□□ 0.67
IFT20-215ENST00000585313 ZNF396Q96N95 335 aaPredicted RBP19.22■□□□□ 0.67
IFT20-215ENST00000585313 AIFM3Q96NN9 605 aa19.22■□□□□ 0.67
IFT20-215ENST00000585313 SPZ1Q9BXG8 430 aa19.22■□□□□ 0.67
IFT20-215ENST00000585313 KANSL2Q9H9L4 492 aa19.22■□□□□ 0.67
IFT20-215ENST00000585313 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.22■□□□□ 0.67
IFT20-215ENST00000585313 SYNPO2Q9UMS6 1093 aa19.22■□□□□ 0.67
IFT20-215ENST00000585313 SNHG28P0DPA3 235 aa19.21■□□□□ 0.67
IFT20-215ENST00000585313 GUCY1A2P33402 732 aa19.21■□□□□ 0.67
IFT20-215ENST00000585313 PKN1Q16512 942 aa19.21■□□□□ 0.67
IFT20-215ENST00000585313 ABCB5Q2M3G0 1257 aa19.21■□□□□ 0.67
IFT20-215ENST00000585313 ASPRV1Q53RT3 343 aa19.21■□□□□ 0.67
IFT20-215ENST00000585313 CMTR1Q8N1G2 835 aaKnown RBP19.21■□□□□ 0.67
IFT20-215ENST00000585313 MKL1Q969V6 931 aa19.21■□□□□ 0.67
IFT20-215ENST00000585313 GPRC5DQ9NZD1 345 aa19.21■□□□□ 0.67
IFT20-215ENST00000585313 PGAP2Q9UHJ9 254 aa19.21■□□□□ 0.67
IFT20-215ENST00000585313 CFAP45Q9UL16 551 aa19.21■□□□□ 0.67
IFT20-215ENST00000585313 FAM196BA6NMK8 535 aa19.2■□□□□ 0.66
IFT20-215ENST00000585313 MMP1P03956 469 aa19.2■□□□□ 0.66
IFT20-215ENST00000585313 YBX3P16989 372 aaKnown RBP eCLIP19.2■□□□□ 0.66
IFT20-215ENST00000585313 MAP3K10Q02779 954 aa19.2■□□□□ 0.66
IFT20-215ENST00000585313 SAFBQ15424 915 aaKnown RBP eCLIP19.2■□□□□ 0.66
IFT20-215ENST00000585313 RBM26Q5T8P6 1007 aaKnown RBP19.2■□□□□ 0.66
IFT20-215ENST00000585313 OTUD7BQ6GQQ9 843 aa19.2■□□□□ 0.66
IFT20-215ENST00000585313 USP48Q86UV5 1035 aa19.2■□□□□ 0.66
IFT20-215ENST00000585313 CCDC82Q8N4S0 544 aa19.2■□□□□ 0.66
IFT20-215ENST00000585313 CABP5Q9NP86 173 aa19.2■□□□□ 0.66
IFT20-215ENST00000585313 CLIP2Q9UDT6 1046 aa19.2■□□□□ 0.66
IFT20-215ENST00000585313 DDX49Q9Y6V7 483 aaKnown RBP19.2■□□□□ 0.66
IFT20-215ENST00000585313 V9GY48 417 aaPredicted RBP19.2■□□□□ 0.66
IFT20-215ENST00000585313 FIBPO43427 364 aa19.19■□□□□ 0.66
IFT20-215ENST00000585313 PDHBP11177 359 aa19.19■□□□□ 0.66
IFT20-215ENST00000585313 SCG2P13521 617 aa19.19■□□□□ 0.66
IFT20-215ENST00000585313 U2AF2P26368 475 aaKnown RBP eCLIP19.19■□□□□ 0.662e-7■■■□□ 17.6
IFT20-215ENST00000585313 PFKFB3Q16875 520 aaPredicted RBP19.19■□□□□ 0.66
IFT20-215ENST00000585313 APOBEC3FQ8IUX4 373 aaKnown RBP19.19■□□□□ 0.66
IFT20-215ENST00000585313 STAG2Q8N3U4 1231 aa19.19■□□□□ 0.66
IFT20-215ENST00000585313 TMEM39BQ9GZU3 492 aa19.19■□□□□ 0.66
IFT20-215ENST00000585313 SH3GLB2Q9NR46 395 aa19.19■□□□□ 0.66
IFT20-215ENST00000585313 DOCK1Q14185 1865 aa19.18■□□□□ 0.66
IFT20-215ENST00000585313 EGFRP00533 1210 aa19.18■□□□□ 0.66
IFT20-215ENST00000585313 UBE2HP62256 183 aa19.18■□□□□ 0.66
IFT20-215ENST00000585313 ICA1Q05084 483 aa19.18■□□□□ 0.66
IFT20-215ENST00000585313 TBC1D10BQ4KMP7 808 aaPredicted RBP19.18■□□□□ 0.66
IFT20-215ENST00000585313 SAMD7Q7Z3H4 446 aa19.18■□□□□ 0.66
IFT20-215ENST00000585313 LRRC47Q8N1G4 583 aaKnown RBP19.18■□□□□ 0.66
IFT20-215ENST00000585313 FOXP1Q9H334 677 aaPredicted RBP19.18■□□□□ 0.66
IFT20-215ENST00000585313 RNF181Q9P0P0 153 aa19.18■□□□□ 0.66
IFT20-215ENST00000585313 KLRF2D3W0D1 207 aa19.17■□□□□ 0.66
IFT20-215ENST00000585313 UBE2Q2LH0YL09 131 aa19.17■□□□□ 0.66
IFT20-215ENST00000585313 GNL2Q13823 731 aaKnown RBP19.17■□□□□ 0.66
IFT20-215ENST00000585313 RASA3Q14644 834 aa19.17■□□□□ 0.66
IFT20-215ENST00000585313 SEPT2Q15019 361 aa19.17■□□□□ 0.66
IFT20-215ENST00000585313 GPATCH4Q5T3I0 446 aaKnown RBP19.17■□□□□ 0.66
IFT20-215ENST00000585313 FAM173BQ6P4H8 233 aa19.17■□□□□ 0.66
IFT20-215ENST00000585313 DCAF4Q8WV16 495 aa19.17■□□□□ 0.66
IFT20-215ENST00000585313 SPATA32Q96LK8 384 aa19.17■□□□□ 0.66
IFT20-215ENST00000585313 GDPD2Q9HCC8 539 aa19.17■□□□□ 0.66
IFT20-215ENST00000585313 GJB4Q9NTQ9 266 aa19.17■□□□□ 0.66
IFT20-215ENST00000585313 HACL1Q9UJ83 578 aa19.17■□□□□ 0.66
IFT20-215ENST00000585313 ZC3H4Q9UPT8 1303 aaKnown RBP19.17■□□□□ 0.66
IFT20-215ENST00000585313 USP17L5A8MUK1 530 aa19.16■□□□□ 0.66
IFT20-215ENST00000585313 KIF28PB7ZC32 967 aa19.16■□□□□ 0.66
IFT20-215ENST00000585313 GDF11O95390 407 aa19.16■□□□□ 0.66
IFT20-215ENST00000585313 GH2P01242 217 aa19.16■□□□□ 0.66
IFT20-215ENST00000585313 SLURP2P0DP57 97 aa19.16■□□□□ 0.66
IFT20-215ENST00000585313 EEF2P13639 858 aaKnown RBP19.16■□□□□ 0.66
IFT20-215ENST00000585313 ZNF543Q08ER8 600 aa19.16■□□□□ 0.66
IFT20-215ENST00000585313 MYSM1Q5VVJ2 828 aa19.16■□□□□ 0.66
IFT20-215ENST00000585313 CLEC10AQ8IUN9 316 aa19.16■□□□□ 0.66
IFT20-215ENST00000585313 GMCL1P1Q8NEA9 526 aa19.16■□□□□ 0.66
IFT20-215ENST00000585313 LEO1Q8WVC0 666 aaPredicted RBP19.16■□□□□ 0.66
IFT20-215ENST00000585313 HOOK2Q96ED9 719 aa19.16■□□□□ 0.66
IFT20-215ENST00000585313 TEPSINQ96N21 525 aa19.16■□□□□ 0.66
IFT20-215ENST00000585313 PHF20Q9BVI0 1012 aa19.16■□□□□ 0.66
IFT20-215ENST00000585313 BRMS1Q9HCU9 246 aa19.16■□□□□ 0.66
IFT20-215ENST00000585313 GINM1Q9NU53 330 aa19.16■□□□□ 0.66
IFT20-215ENST00000585313 USP17L2Q6R6M4 530 aa19.15■□□□□ 0.66
IFT20-215ENST00000585313 DIS3L2Q8IYB7 885 aaKnown RBP19.15■□□□□ 0.66
IFT20-215ENST00000585313 RIOX1Q9H6W3 641 aa19.15■□□□□ 0.66
IFT20-215ENST00000585313 RTEL1Q9NZ71 1219 aa19.15■□□□□ 0.66
IFT20-215ENST00000585313 PPP2R3BQ9Y5P8 575 aa19.15■□□□□ 0.66
IFT20-215ENST00000585313 PITPNM2Q9BZ72 1349 aa19.15■□□□□ 0.66
IFT20-215ENST00000585313 POLR2AP24928 1970 aaKnown RBP19.15■□□□□ 0.66
IFT20-215ENST00000585313 hCG_1984214I3L0E3 225 aa19.14■□□□□ 0.65
IFT20-215ENST00000585313 CYTH3O43739 400 aa19.14■□□□□ 0.65
IFT20-215ENST00000585313 YEATS4O95619 227 aa19.14■□□□□ 0.65
IFT20-215ENST00000585313 CALML3P27482 149 aa19.14■□□□□ 0.65
IFT20-215ENST00000585313 ATP2B2Q01814 1243 aa19.14■□□□□ 0.65
IFT20-215ENST00000585313 RRP1BQ14684 758 aaKnown RBP19.14■□□□□ 0.65
IFT20-215ENST00000585313 SLC35G1Q2M3R5 365 aa19.14■□□□□ 0.65
IFT20-215ENST00000585313 C9orf131Q5VYM1 1079 aa19.14■□□□□ 0.65
IFT20-215ENST00000585313 NOSTRINQ8IVI9 506 aa19.14■□□□□ 0.65
IFT20-215ENST00000585313 ZNF713Q8N859 430 aaPredicted RBP19.14■□□□□ 0.65
IFT20-215ENST00000585313 CCDC148Q8NFR7 591 aa19.14■□□□□ 0.65
IFT20-215ENST00000585313 GPT2Q8TD30 523 aa19.14■□□□□ 0.65
IFT20-215ENST00000585313 RRP36Q96EU6 259 aaKnown RBP19.14■□□□□ 0.65
IFT20-215ENST00000585313 ARHGEF10LQ9HCE6 1279 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms