RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 ZNF76P36508 570 aa12.8□□□□□ -0.36
TOP3A-217ENST00000584582 SNAP25P60880 206 aa12.8□□□□□ -0.36
TOP3A-217ENST00000584582 PLA2G4DQ86XP0 818 aa12.8□□□□□ -0.36
TOP3A-217ENST00000584582 IGSF22Q8N9C0 903 aa12.8□□□□□ -0.36
TOP3A-217ENST00000584582 DRC1Q96MC2 740 aa12.8□□□□□ -0.36
TOP3A-217ENST00000584582 BAG1Q99933 345 aaPredicted RBP12.8□□□□□ -0.36
TOP3A-217ENST00000584582 ATP8A2Q9NTI2 1148 aa12.8□□□□□ -0.36
TOP3A-217ENST00000584582 AFF2P51816 1311 aa12.79□□□□□ -0.36
TOP3A-217ENST00000584582 GPSM2P81274 684 aa12.79□□□□□ -0.36
TOP3A-217ENST00000584582 NTRK3Q16288 839 aa12.79□□□□□ -0.36
TOP3A-217ENST00000584582 NBPF11Q86T75 865 aa12.79□□□□□ -0.36
TOP3A-217ENST00000584582 FOXP1Q9H334 677 aaPredicted RBP12.79□□□□□ -0.36
TOP3A-217ENST00000584582 PPP6R2O75170 966 aa12.79□□□□□ -0.36
TOP3A-217ENST00000584582 ALX1Q15699 326 aa12.79□□□□□ -0.36
TOP3A-217ENST00000584582 USH1GQ495M9 461 aa12.79□□□□□ -0.36
TOP3A-217ENST00000584582 ZMYND15Q9H091 742 aa12.79□□□□□ -0.36
TOP3A-217ENST00000584582 XDHP47989 1333 aa12.79□□□□□ -0.36
TOP3A-217ENST00000584582 TNS2Q63HR2 1409 aa12.79□□□□□ -0.36
TOP3A-217ENST00000584582 RBM6P78332 1123 aaKnown RBP12.78□□□□□ -0.36
TOP3A-217ENST00000584582 UBXN1Q04323 297 aa12.78□□□□□ -0.36
TOP3A-217ENST00000584582 AMIGO3Q86WK7 504 aa12.78□□□□□ -0.36
TOP3A-217ENST00000584582 ZFP91Q96JP5 570 aaPredicted RBP12.78□□□□□ -0.36
TOP3A-217ENST00000584582 MAP7D2Q96T17 732 aa12.78□□□□□ -0.36
TOP3A-217ENST00000584582 DEF6Q9H4E7 631 aa12.78□□□□□ -0.36
TOP3A-217ENST00000584582 VEZTQ9HBM0 779 aa12.78□□□□□ -0.36
TOP3A-217ENST00000584582 PUF60Q9UHX1 559 aaKnown RBP12.78□□□□□ -0.36
TOP3A-217ENST00000584582 SYNRGQ9UMZ2 1314 aa12.78□□□□□ -0.36
TOP3A-217ENST00000584582 CASQ1P31415 396 aa12.78□□□□□ -0.36
TOP3A-217ENST00000584582 EPS15P42566 896 aa12.78□□□□□ -0.36
TOP3A-217ENST00000584582 GRAPQ13588 217 aa12.78□□□□□ -0.36
TOP3A-217ENST00000584582 SF3B3Q15393 1217 aaKnown RBP12.78□□□□□ -0.36
TOP3A-217ENST00000584582 GRAPLQ8TC17 118 aaPredicted RBP12.78□□□□□ -0.36
TOP3A-217ENST00000584582 POLD4Q9HCU8 107 aa12.78□□□□□ -0.36
TOP3A-217ENST00000584582 TOB1P50616 345 aaPredicted RBP12.78□□□□□ -0.36
TOP3A-217ENST00000584582 RESP18Q5W5W9 173 aa12.78□□□□□ -0.36
TOP3A-217ENST00000584582 TMTC3Q6ZXV5 915 aa12.78□□□□□ -0.36
TOP3A-217ENST00000584582 KCTD1Q719H9 257 aa12.78□□□□□ -0.36
TOP3A-217ENST00000584582 PIGSQ96S52 555 aa12.78□□□□□ -0.36
TOP3A-217ENST00000584582 RIOK1Q9BRS2 568 aaKnown RBP12.78□□□□□ -0.36
TOP3A-217ENST00000584582 C6orf50Q9HD87 102 aa12.78□□□□□ -0.36
TOP3A-217ENST00000584582 CD209Q9NNX6 404 aa12.78□□□□□ -0.36
TOP3A-217ENST00000584582 SCAF8Q9UPN6 1271 aaKnown RBP12.78□□□□□ -0.36
TOP3A-217ENST00000584582 ZSCAN12O43309 604 aa12.77□□□□□ -0.36
TOP3A-217ENST00000584582 TRIM21P19474 475 aaKnown RBP12.77□□□□□ -0.36
TOP3A-217ENST00000584582 PTPREP23469 700 aa12.77□□□□□ -0.36
TOP3A-217ENST00000584582 GNAQP50148 359 aa12.77□□□□□ -0.36
TOP3A-217ENST00000584582 ARID5AQ03989 594 aa12.77□□□□□ -0.36
TOP3A-217ENST00000584582 SLF2Q8IX21 1173 aa12.77□□□□□ -0.36
TOP3A-217ENST00000584582 SPICE1Q8N0Z3 855 aa12.77□□□□□ -0.36
TOP3A-217ENST00000584582 CCDC148Q8NFR7 591 aa12.77□□□□□ -0.36
TOP3A-217ENST00000584582 CAGE1Q8TC20 777 aa12.77□□□□□ -0.36
TOP3A-217ENST00000584582 HINFPQ9BQA5 517 aa12.77□□□□□ -0.36
TOP3A-217ENST00000584582 POLR3GO15318 223 aaPredicted RBP12.77□□□□□ -0.37
TOP3A-217ENST00000584582 HLA-DOAP06340 250 aa12.77□□□□□ -0.37
TOP3A-217ENST00000584582 FCHSD1Q86WN1 690 aa12.77□□□□□ -0.37
TOP3A-217ENST00000584582 EXOC1Q9NV70 894 aa12.77□□□□□ -0.37
TOP3A-217ENST00000584582 FMR1Q06787 632 aaKnown RBP eCLIP12.77□□□□□ -0.37
TOP3A-217ENST00000584582 PRR5LQ6MZQ0 368 aa12.77□□□□□ -0.37
TOP3A-217ENST00000584582 KIAA1328Q86T90 577 aa12.77□□□□□ -0.37
TOP3A-217ENST00000584582 MLKLQ8NB16 471 aa12.77□□□□□ -0.37
TOP3A-217ENST00000584582 CALML4Q96GE6 196 aa12.77□□□□□ -0.37
TOP3A-217ENST00000584582 PKD2L1Q9P0L9 805 aa12.77□□□□□ -0.37
TOP3A-217ENST00000584582 ZHX1Q9UKY1 873 aaPredicted RBP12.77□□□□□ -0.37
TOP3A-217ENST00000584582 GDAQ9Y2T3 454 aa12.77□□□□□ -0.37
TOP3A-217ENST00000584582 PARP3Q9Y6F1 533 aa12.77□□□□□ -0.37
TOP3A-217ENST00000584582 SALL1Q9NSC2 1324 aa12.77□□□□□ -0.37
TOP3A-217ENST00000584582 ERCC6LQ2NKX8 1250 aa12.76□□□□□ -0.37
TOP3A-217ENST00000584582 FOXP4Q8IVH2 680 aaPredicted RBP12.76□□□□□ -0.37
TOP3A-217ENST00000584582 PAXBP1Q9Y5B6 917 aa12.76□□□□□ -0.37
TOP3A-217ENST00000584582 PDE4DQ08499 809 aa12.76□□□□□ -0.37
TOP3A-217ENST00000584582 ZNF512BQ96KM6 892 aaPredicted RBP12.76□□□□□ -0.37
TOP3A-217ENST00000584582 GJD4Q96KN9 370 aaPredicted RBP12.76□□□□□ -0.37
TOP3A-217ENST00000584582 TMEM47Q9BQJ4 181 aa12.76□□□□□ -0.37
TOP3A-217ENST00000584582 CARD6Q9BX69 1037 aa12.76□□□□□ -0.37
TOP3A-217ENST00000584582 MMRN2Q9H8L6 949 aa12.76□□□□□ -0.37
TOP3A-217ENST00000584582 PNPLA7Q6ZV29 1317 aa12.76□□□□□ -0.37
TOP3A-217ENST00000584582 ERICH4A6NGS2 130 aa12.76□□□□□ -0.37
TOP3A-217ENST00000584582 CDK8P49336 464 aa12.76□□□□□ -0.37
TOP3A-217ENST00000584582 GJA10Q969M2 543 aa12.76□□□□□ -0.37
TOP3A-217ENST00000584582 BRIP1Q9BX63 1249 aa12.76□□□□□ -0.37
TOP3A-217ENST00000584582 ZNHIT6Q9NWK9 470 aaKnown RBP12.76□□□□□ -0.37
TOP3A-217ENST00000584582 GUCA1BQ9UMX6 200 aa12.76□□□□□ -0.37
TOP3A-217ENST00000584582 SRPRBQ9Y5M8 271 aaKnown RBP12.76□□□□□ -0.37
TOP3A-217ENST00000584582 TEX33O43247 280 aa12.75□□□□□ -0.37
TOP3A-217ENST00000584582 CACNB1Q02641 598 aaPredicted RBP12.75□□□□□ -0.37
TOP3A-217ENST00000584582 CUL4BQ13620 913 aa12.75□□□□□ -0.37
TOP3A-217ENST00000584582 PTPAQ15257 358 aa12.75□□□□□ -0.37
TOP3A-217ENST00000584582 NELFBQ8WX92 580 aa12.75□□□□□ -0.37
TOP3A-217ENST00000584582 PRPF3O43395 683 aaKnown RBP12.75□□□□□ -0.37
TOP3A-217ENST00000584582 TROAPQ12815 778 aa12.75□□□□□ -0.37
TOP3A-217ENST00000584582 UBE2SQ16763 222 aa12.75□□□□□ -0.37
TOP3A-217ENST00000584582 ARMCX5Q6P1M9 558 aa12.75□□□□□ -0.37
TOP3A-217ENST00000584582 FBXO33Q7Z6M2 555 aa12.75□□□□□ -0.37
TOP3A-217ENST00000584582 CEP95Q96GE4 821 aa12.75□□□□□ -0.37
TOP3A-217ENST00000584582 FBXO2Q9UK22 296 aaPredicted RBP12.75□□□□□ -0.37
TOP3A-217ENST00000584582 CTDP1Q9Y5B0 961 aaPredicted RBP12.75□□□□□ -0.37
TOP3A-217ENST00000584582 TRIM49BA6NDI0 452 aa12.75□□□□□ -0.37
TOP3A-217ENST00000584582 USP17L5A8MUK1 530 aa12.75□□□□□ -0.37
TOP3A-217ENST00000584582 KIF5CO60282 957 aa12.75□□□□□ -0.37
TOP3A-217ENST00000584582 GDF11O95390 407 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms