RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-222ENST00000582892 HMX1Q9NP08 348 aaPredicted RBP9.03□□□□□ -0.96
NF1-222ENST00000582892 GJD2Q9UKL4 321 aa9.03□□□□□ -0.96
NF1-222ENST00000582892 NOB1Q9ULX3 412 aaKnown RBP9.03□□□□□ -0.96
NF1-222ENST00000582892 TNNQ9UQP3 1299 aa9.03□□□□□ -0.96
NF1-222ENST00000582892 RLFQ13129 1914 aa9.03□□□□□ -0.96
NF1-222ENST00000582892 ATAD5Q96QE3 1844 aa9.03□□□□□ -0.96
NF1-222ENST00000582892 CACNA1AO00555 2505 aa9.02□□□□□ -0.96
NF1-222ENST00000582892 ANKRD18BA2A2Z9 1011 aa9.02□□□□□ -0.97
NF1-222ENST00000582892 VAMP4O75379 141 aa9.02□□□□□ -0.97
NF1-222ENST00000582892 FOXO4P98177 505 aa9.02□□□□□ -0.97
NF1-222ENST00000582892 GCKRQ14397 625 aa9.02□□□□□ -0.97
NF1-222ENST00000582892 EPHA10Q5JZY3 1008 aa9.02□□□□□ -0.97
NF1-222ENST00000582892 NOL9Q5SY16 702 aaKnown RBP9.02□□□□□ -0.97
NF1-222ENST00000582892 MYSM1Q5VVJ2 828 aa9.02□□□□□ -0.97
NF1-222ENST00000582892 DCAF15Q66K64 600 aa9.02□□□□□ -0.97
NF1-222ENST00000582892 RNF19BQ6ZMZ0 732 aa9.02□□□□□ -0.97
NF1-222ENST00000582892 FAM83AQ86UY5 434 aa9.02□□□□□ -0.97
NF1-222ENST00000582892 ITPRIPQ8IWB1 547 aa9.02□□□□□ -0.97
NF1-222ENST00000582892 SMCR8Q8TEV9 937 aaPredicted RBP9.02□□□□□ -0.97
NF1-222ENST00000582892 COA7Q96BR5 231 aa9.02□□□□□ -0.97
NF1-222ENST00000582892 API5Q9BZZ5 524 aaKnown RBP9.02□□□□□ -0.97
NF1-222ENST00000582892 CHMP3Q9Y3E7 222 aa9.02□□□□□ -0.97
NF1-222ENST00000582892 ZHX2Q9Y6X8 837 aa9.02□□□□□ -0.97
NF1-222ENST00000582892 TRANK1O15050 2925 aa9.01□□□□□ -0.97
NF1-222ENST00000582892 ATRNL1Q5VV63 1379 aa9.01□□□□□ -0.97
NF1-222ENST00000582892 CXCL11O14625 94 aa9.01□□□□□ -0.97
NF1-222ENST00000582892 DDX58O95786 925 aaKnown RBP9.01□□□□□ -0.97
NF1-222ENST00000582892 S1PR4O95977 384 aa9.01□□□□□ -0.97
NF1-222ENST00000582892 PRKCSHP14314 528 aaPredicted RBP9.01□□□□□ -0.97
NF1-222ENST00000582892 NDUFV2P19404 249 aa9.01□□□□□ -0.97
NF1-222ENST00000582892 CCND3P30281 292 aaPredicted RBP9.01□□□□□ -0.97
NF1-222ENST00000582892 HIBADHP31937 336 aaKnown RBP9.01□□□□□ -0.97
NF1-222ENST00000582892 CLK2P49760 499 aaKnown RBP9.01□□□□□ -0.97
NF1-222ENST00000582892 GUCA2AQ02747 115 aa9.01□□□□□ -0.97
NF1-222ENST00000582892 NUCB1Q02818 461 aa9.01□□□□□ -0.97
NF1-222ENST00000582892 MTMR2Q13614 643 aa9.01□□□□□ -0.97
NF1-222ENST00000582892 NFKBIBQ15653 356 aa9.01□□□□□ -0.97
NF1-222ENST00000582892 TMEM57Q8N5G2 664 aa9.01□□□□□ -0.97
NF1-222ENST00000582892 TEKT1Q969V4 418 aa9.01□□□□□ -0.97
NF1-222ENST00000582892 NECAB3Q96P71 396 aaPredicted RBP9.01□□□□□ -0.97
NF1-222ENST00000582892 PUS3Q9BZE2 481 aaKnown RBP9.01□□□□□ -0.97
NF1-222ENST00000582892 FAM117AQ9C073 453 aa9.01□□□□□ -0.97
NF1-222ENST00000582892 TRIM75PA6NK02 468 aa9□□□□□ -0.97
NF1-222ENST00000582892 PHF20L1A8MW92 1017 aa9□□□□□ -0.97
NF1-222ENST00000582892 PTPRAP18433 802 aa9□□□□□ -0.97
NF1-222ENST00000582892 CYP2B6P20813 491 aa9□□□□□ -0.97
NF1-222ENST00000582892 CACNB2Q08289 660 aaPredicted RBP9□□□□□ -0.97
NF1-222ENST00000582892 NEXNQ0ZGT2 675 aa9□□□□□ -0.97
NF1-222ENST00000582892 GRIN2CQ14957 1233 aa9□□□□□ -0.97
NF1-222ENST00000582892 CCL14Q16627 93 aa9□□□□□ -0.97
NF1-222ENST00000582892 SH3D19Q5HYK7 790 aa9□□□□□ -0.97
NF1-222ENST00000582892 MAP3K21Q5TCX8 1036 aa9□□□□□ -0.97
NF1-222ENST00000582892 PPM1EQ8WY54 764 aa9□□□□□ -0.97
NF1-222ENST00000582892 HLA-CQ95604 372 aa9□□□□□ -0.97
NF1-222ENST00000582892 ZDHHC15Q96MV8 337 aa9□□□□□ -0.97
NF1-222ENST00000582892 BCL11AQ9H165 835 aa9□□□□□ -0.97
NF1-222ENST00000582892 TMOD2Q9NZR1 351 aa9□□□□□ -0.97
NF1-222ENST00000582892 AFG3L2Q9Y4W6 797 aa9□□□□□ -0.97
NF1-222ENST00000582892 CAPN2P17655 700 aa8.99□□□□□ -0.97
NF1-222ENST00000582892 IFIT5Q13325 482 aaKnown RBP8.99□□□□□ -0.97
NF1-222ENST00000582892 SKIV2LQ15477 1246 aaKnown RBP8.99□□□□□ -0.97
NF1-222ENST00000582892 FAM110CQ1W6H9 321 aa8.99□□□□□ -0.97
NF1-222ENST00000582892 FKBP1CQ5VVH2 108 aa8.99□□□□□ -0.97
NF1-222ENST00000582892 LMBR1LQ6UX01 489 aa8.99□□□□□ -0.97
NF1-222ENST00000582892 ADAMTS19Q8TE59 1207 aa8.99□□□□□ -0.97
NF1-222ENST00000582892 FAM151AQ8WW52 585 aa8.99□□□□□ -0.97
NF1-222ENST00000582892 LBHD1Q9BQE6 289 aaPredicted RBP8.99□□□□□ -0.97
NF1-222ENST00000582892 PLXNA1Q9UIW2 1896 aa8.99□□□□□ -0.97
NF1-222ENST00000582892 MYH2Q9UKX2 1941 aa8.98□□□□□ -0.97
NF1-222ENST00000582892 RNF223E7ERA6 249 aa8.98□□□□□ -0.97
NF1-222ENST00000582892 HDLBPQ00341 1268 aaKnown RBP8.98□□□□□ -0.97
NF1-222ENST00000582892 TWISTNBQ3B726 338 aaPredicted RBP8.98□□□□□ -0.97
NF1-222ENST00000582892 BMP2KLQ5H9B9 411 aa8.98□□□□□ -0.97
NF1-222ENST00000582892 CDC42EP5Q6NZY7 148 aa8.98□□□□□ -0.97
NF1-222ENST00000582892 LDHAL6AQ6ZMR3 332 aa8.98□□□□□ -0.97
NF1-222ENST00000582892 SH3BP5LQ7L8J4 393 aa8.98□□□□□ -0.97
NF1-222ENST00000582892 FASTKD5Q7L8L6 764 aaKnown RBP8.98□□□□□ -0.97
NF1-222ENST00000582892 FBXO33Q7Z6M2 555 aa8.98□□□□□ -0.97
NF1-222ENST00000582892 SCYL3Q8IZE3 742 aa8.98□□□□□ -0.97
NF1-222ENST00000582892 FAM160A2Q8N612 972 aaPredicted RBP8.98□□□□□ -0.97
NF1-222ENST00000582892 HOOK2Q96ED9 719 aa8.98□□□□□ -0.97
NF1-222ENST00000582892 SENP6Q9GZR1 1112 aaPredicted RBP8.98□□□□□ -0.97
NF1-222ENST00000582892 GOPCQ9HD26 462 aa8.98□□□□□ -0.97
NF1-222ENST00000582892 CNNM1Q9NRU3 951 aa8.98□□□□□ -0.97
NF1-222ENST00000582892 PCDHGC3Q9UN70 934 aa8.98□□□□□ -0.97
NF1-222ENST00000582892 DAGLAQ9Y4D2 1042 aa8.98□□□□□ -0.97
NF1-222ENST00000582892 USP34Q70CQ2 3546 aa8.98□□□□□ -0.97
NF1-222ENST00000582892 GBF1Q92538 1859 aa8.98□□□□□ -0.97
NF1-222ENST00000582892 MMP16P51512 607 aa8.97□□□□□ -0.97
NF1-222ENST00000582892 EPHB4P54760 987 aa8.97□□□□□ -0.97
NF1-222ENST00000582892 RTP1P59025 263 aa8.97□□□□□ -0.97
NF1-222ENST00000582892 CCDC30Q5VVM6 783 aa8.97□□□□□ -0.97
NF1-222ENST00000582892 SH3RF1Q7Z6J0 888 aa8.97□□□□□ -0.97
NF1-222ENST00000582892 CHD1LQ86WJ1 897 aa8.97□□□□□ -0.97
NF1-222ENST00000582892 BADQ92934 168 aa8.97□□□□□ -0.97
NF1-222ENST00000582892 UHRF1Q96T88 793 aaPredicted RBP8.97□□□□□ -0.97
NF1-222ENST00000582892 AGTPBP1Q9UPW5 1226 aa8.97□□□□□ -0.97
NF1-222ENST00000582892 ATP11BQ9Y2G3 1177 aa8.97□□□□□ -0.97
NF1-222ENST00000582892 SLC45A1Q9Y2W3 748 aa8.97□□□□□ -0.97
NF1-222ENST00000582892 V9GY48 417 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms