RNA–Protein interactions for RNA: ENST00000573842.1

HCFC1R1-205, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-205ENST00000573842 SMC5Q8IY18 1101 aa25.49■■□□□ 1.67
HCFC1R1-205ENST00000573842 KANSL2Q9H9L4 492 aa25.49■■□□□ 1.67
HCFC1R1-205ENST00000573842 MKNK2Q9HBH9 465 aa25.49■■□□□ 1.67
HCFC1R1-205ENST00000573842 ZNF287Q9HBT7 754 aa25.49■■□□□ 1.67
HCFC1R1-205ENST00000573842 TMX2Q9Y320 296 aa25.49■■□□□ 1.67
HCFC1R1-205ENST00000573842 ATP2B2Q01814 1243 aa25.48■■□□□ 1.67
HCFC1R1-205ENST00000573842 SEC62Q99442 399 aaKnown RBP25.48■■□□□ 1.67
HCFC1R1-205ENST00000573842 NUDT12Q9BQG2 462 aa25.48■■□□□ 1.67
HCFC1R1-205ENST00000573842 SPDYE16A6NNV3 312 aaPredicted RBP25.47■■□□□ 1.67
HCFC1R1-205ENST00000573842 PATL2C9JE40 543 aaKnown RBP25.47■■□□□ 1.67
HCFC1R1-205ENST00000573842 HMGCRP04035 888 aa25.47■■□□□ 1.67
HCFC1R1-205ENST00000573842 GJB1P08034 283 aa25.47■■□□□ 1.67
HCFC1R1-205ENST00000573842 PRPF38BQ5VTL8 546 aaKnown RBP25.47■■□□□ 1.67
HCFC1R1-205ENST00000573842 STK11IPQ8N1F8 1099 aa25.47■■□□□ 1.67
HCFC1R1-205ENST00000573842 UNC93B1Q9H1C4 597 aa25.47■■□□□ 1.67
HCFC1R1-205ENST00000573842 PORCNQ9H237 461 aa25.47■■□□□ 1.67
HCFC1R1-205ENST00000573842 VCPKMTQ9H867 229 aa25.47■■□□□ 1.67
HCFC1R1-205ENST00000573842 GJD2Q9UKL4 321 aa25.47■■□□□ 1.67
HCFC1R1-205ENST00000573842 ZNF236Q9UL36 1845 aa25.47■■□□□ 1.67
HCFC1R1-205ENST00000573842 GJA8P48165 433 aa25.46■■□□□ 1.67
HCFC1R1-205ENST00000573842 Q3C1V9 767 aa25.46■■□□□ 1.67
HCFC1R1-205ENST00000573842 B4GALNT3Q6L9W6 998 aa25.46■■□□□ 1.67
HCFC1R1-205ENST00000573842 GPR142Q7Z601 462 aa25.46■■□□□ 1.67
HCFC1R1-205ENST00000573842 IFNL3Q8IZI9 196 aa25.46■■□□□ 1.67
HCFC1R1-205ENST00000573842 NAPBQ9H115 298 aa25.46■■□□□ 1.67
HCFC1R1-205ENST00000573842 SUPT16HQ9Y5B9 1047 aaKnown RBP25.46■■□□□ 1.67
HCFC1R1-205ENST00000573842 WDR46O15213 610 aaKnown RBP25.45■■□□□ 1.66
HCFC1R1-205ENST00000573842 CNMDO75829 334 aa25.45■■□□□ 1.66
HCFC1R1-205ENST00000573842 EEF2P13639 858 aaKnown RBP25.45■■□□□ 1.66
HCFC1R1-205ENST00000573842 RASA1P20936 1047 aa25.45■■□□□ 1.66
HCFC1R1-205ENST00000573842 COG2Q14746 738 aa25.45■■□□□ 1.66
HCFC1R1-205ENST00000573842 POTEEQ6S8J3 1075 aa25.45■■□□□ 1.66
HCFC1R1-205ENST00000573842 PLEKHH3Q7Z736 793 aa25.45■■□□□ 1.66
HCFC1R1-205ENST00000573842 SPICE1Q8N0Z3 855 aa25.45■■□□□ 1.66
HCFC1R1-205ENST00000573842 SHISA4Q96DD7 197 aa25.45■■□□□ 1.66
HCFC1R1-205ENST00000573842 GOPCQ9HD26 462 aa25.45■■□□□ 1.66
HCFC1R1-205ENST00000573842 HOXC10Q9NYD6 342 aa25.45■■□□□ 1.66
HCFC1R1-205ENST00000573842 SLC3A2P08195 630 aaKnown RBP25.44■■□□□ 1.66
HCFC1R1-205ENST00000573842 WDR78Q5VTH9 848 aa25.44■■□□□ 1.66
HCFC1R1-205ENST00000573842 CHD1LQ86WJ1 897 aa25.44■■□□□ 1.66
HCFC1R1-205ENST00000573842 SIAH1Q8IUQ4 282 aa25.44■■□□□ 1.66
HCFC1R1-205ENST00000573842 FLOT1O75955 427 aa25.43■■□□□ 1.66
HCFC1R1-205ENST00000573842 CYP2B6P20813 491 aa25.43■■□□□ 1.66
HCFC1R1-205ENST00000573842 RGS2P41220 211 aa25.43■■□□□ 1.66
HCFC1R1-205ENST00000573842 KIAA1755Q5JYT7 1200 aa25.43■■□□□ 1.66
HCFC1R1-205ENST00000573842 U2AF1L4Q8WU68 220 aaKnown RBP25.43■■□□□ 1.66
HCFC1R1-205ENST00000573842 BTBD7Q9P203 1132 aa25.43■■□□□ 1.66
HCFC1R1-205ENST00000573842 XRCC5P13010 732 aaKnown RBP25.42■■□□□ 1.66
HCFC1R1-205ENST00000573842 PDE4BQ07343 736 aa25.42■■□□□ 1.66
HCFC1R1-205ENST00000573842 TICAM2Q86XR7 235 aa25.42■■□□□ 1.66
HCFC1R1-205ENST00000573842 TRMT44Q8IYL2 757 aaKnown RBP25.42■■□□□ 1.66
HCFC1R1-205ENST00000573842 MB21D1Q8N884 522 aa25.42■■□□□ 1.66
HCFC1R1-205ENST00000573842 APBA2Q99767 749 aa25.42■■□□□ 1.66
HCFC1R1-205ENST00000573842 IVNS1ABPQ9Y6Y0 642 aa25.42■■□□□ 1.66
HCFC1R1-205ENST00000573842 TRIM6-TRIM34B2RNG4 842 aa25.41■■□□□ 1.66
HCFC1R1-205ENST00000573842 RAD21O60216 631 aa25.41■■□□□ 1.66
HCFC1R1-205ENST00000573842 IGHDP01880 384 aa25.41■■□□□ 1.66
HCFC1R1-205ENST00000573842 ZKSCAN1P17029 563 aaPredicted RBP25.41■■□□□ 1.66
HCFC1R1-205ENST00000573842 NUCB1Q02818 461 aa25.41■■□□□ 1.66
HCFC1R1-205ENST00000573842 CCDC129Q6ZRS4 1044 aa25.41■■□□□ 1.66
HCFC1R1-205ENST00000573842 ZNF444Q8N0Y2 327 aaPredicted RBP25.41■■□□□ 1.66
HCFC1R1-205ENST00000573842 TRIB2Q92519 343 aa25.41■■□□□ 1.66
HCFC1R1-205ENST00000573842 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.41■■□□□ 1.66
HCFC1R1-205ENST00000573842 PAK6Q9NQU5 681 aaPredicted RBP25.41■■□□□ 1.66
HCFC1R1-205ENST00000573842 HELLSQ9NRZ9 838 aa25.41■■□□□ 1.66
HCFC1R1-205ENST00000573842 FRMPD3Q5JV73 1810 aa25.4■■□□□ 1.66
HCFC1R1-205ENST00000573842 PRDM1O75626 825 aa25.4■■□□□ 1.66
HCFC1R1-205ENST00000573842 CAPN2P17655 700 aa25.4■■□□□ 1.66
HCFC1R1-205ENST00000573842 PPARAQ07869 468 aa25.4■■□□□ 1.66
HCFC1R1-205ENST00000573842 MORN1Q5T089 497 aa25.4■■□□□ 1.66
HCFC1R1-205ENST00000573842 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.4■■□□□ 1.66
HCFC1R1-205ENST00000573842 PLIN4Q96Q06 1357 aa25.4■■□□□ 1.66
HCFC1R1-205ENST00000573842 SGPL1O95470 568 aa25.39■■□□□ 1.66
HCFC1R1-205ENST00000573842 DSG3P32926 999 aa25.39■■□□□ 1.66
HCFC1R1-205ENST00000573842 USP6NLQ92738 828 aa25.39■■□□□ 1.66
HCFC1R1-205ENST00000573842 DEFB118Q96PH6 123 aa25.39■■□□□ 1.66
HCFC1R1-205ENST00000573842 LAMA4Q16363 1823 aa25.38■■□□□ 1.65
HCFC1R1-205ENST00000573842 SLC15A5A6NIM6 579 aa25.38■■□□□ 1.65
HCFC1R1-205ENST00000573842 MAP2K5Q13163 448 aa25.38■■□□□ 1.65
HCFC1R1-205ENST00000573842 SAMD1Q6SPF0 538 aaPredicted RBP25.38■■□□□ 1.65
HCFC1R1-205ENST00000573842 SPATC1LQ9H0A9 340 aa25.38■■□□□ 1.65
HCFC1R1-205ENST00000573842 HMX1Q9NP08 348 aaPredicted RBP25.38■■□□□ 1.65
HCFC1R1-205ENST00000573842 NYAP2Q9P242 653 aa25.38■■□□□ 1.65
HCFC1R1-205ENST00000573842 RPTORQ8N122 1335 aa25.37■■□□□ 1.65
HCFC1R1-205ENST00000573842 FARP2O94887 1054 aaPredicted RBP25.37■■□□□ 1.65
HCFC1R1-205ENST00000573842 TSPY3P0CV98 308 aa25.37■■□□□ 1.65
HCFC1R1-205ENST00000573842 TSPY8P0CW00 308 aa25.37■■□□□ 1.65
HCFC1R1-205ENST00000573842 RILPL2Q969X0 211 aa25.37■■□□□ 1.65
HCFC1R1-205ENST00000573842 ATG4CQ96DT6 458 aa25.37■■□□□ 1.65
HCFC1R1-205ENST00000573842 ZNFX1Q9P2E3 1918 aaKnown RBP25.37■■□□□ 1.65
HCFC1R1-205ENST00000573842 A0A0D9SFI3 127 aa25.36■■□□□ 1.65
HCFC1R1-205ENST00000573842 PRKAR2AP13861 404 aaKnown RBP25.36■■□□□ 1.65
HCFC1R1-205ENST00000573842 PTPREP23469 700 aa25.36■■□□□ 1.65
HCFC1R1-205ENST00000573842 TRIM32Q13049 653 aa25.36■■□□□ 1.65
HCFC1R1-205ENST00000573842 GRB14Q14449 540 aa25.36■■□□□ 1.65
HCFC1R1-205ENST00000573842 PLS1Q14651 629 aa25.36■■□□□ 1.65
HCFC1R1-205ENST00000573842 MCMDC2Q4G0Z9 681 aa25.36■■□□□ 1.65
HCFC1R1-205ENST00000573842 FAM83BQ5T0W9 1011 aa25.36■■□□□ 1.65
HCFC1R1-205ENST00000573842 PLEKHM2Q8IWE5 1019 aa25.36■■□□□ 1.65
HCFC1R1-205ENST00000573842 SHCBP1Q8NEM2 672 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms