RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 GOLGA8CPA6NN73 597 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 POM121CA8CG34 1229 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 H0YGN5 161 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 ADCY3O60266 1144 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 FARP2O94887 1054 aaPredicted RBP7.98□□□□□ -1.13
SMG6-204ENST00000570606 GNAI2P04899 355 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 LDHCP07864 332 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 SLURP2P0DP57 97 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 PPP4CP60510 307 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 G3BP1Q13283 466 aaKnown RBP eCLIP7.98□□□□□ -1.13
SMG6-204ENST00000570606 MTX1Q13505 466 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 Q3C1V9 767 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 DESI1Q6ICB0 168 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 BLOC1S3Q6QNY0 202 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 PI16Q6UXB8 463 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 RNF19BQ6ZMZ0 732 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 CCDC84Q86UT8 332 aaPredicted RBP7.98□□□□□ -1.13
SMG6-204ENST00000570606 TEX11Q8IYF3 940 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 SPATA5Q8NB90 893 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 EPS8L1Q8TE68 723 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 ARHGAP45Q92619 1136 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 DPF3Q92784 378 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 WNT2BQ93097 391 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 HTATIP2Q9BUP3 242 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 HMG20BQ9P0W2 317 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 TSR3Q9UJK0 312 aaKnown RBP7.98□□□□□ -1.13
SMG6-204ENST00000570606 GABRQQ9UN88 632 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 AGTPBP1Q9UPW5 1226 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 SLC45A1Q9Y2W3 748 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 GPR75-ASB3A0A0A6YYF3 556 aa7.97□□□□□ -1.13
SMG6-204ENST00000570606 INHAP05111 366 aa7.97□□□□□ -1.13
SMG6-204ENST00000570606 GJB1P08034 283 aa7.97□□□□□ -1.13
SMG6-204ENST00000570606 UQCRFS1P1P0C7P4 283 aa7.97□□□□□ -1.13
SMG6-204ENST00000570606 TRIM27P14373 513 aa7.97□□□□□ -1.13
SMG6-204ENST00000570606 ELNP15502 786 aa7.97□□□□□ -1.13
SMG6-204ENST00000570606 ARID4AP29374 1257 aaPredicted RBP7.97□□□□□ -1.13
SMG6-204ENST00000570606 GJA8P48165 433 aa7.97□□□□□ -1.13
SMG6-204ENST00000570606 FLT3LGP49771 235 aa7.97□□□□□ -1.13
SMG6-204ENST00000570606 FXR1P51114 621 aaKnown RBP eCLIP7.97□□□□□ -1.13
SMG6-204ENST00000570606 RHBDL3P58872 404 aa7.97□□□□□ -1.13
SMG6-204ENST00000570606 OS9Q13438 667 aaPredicted RBP7.97□□□□□ -1.13
SMG6-204ENST00000570606 TTC39AQ5SRH9 613 aa7.97□□□□□ -1.13
SMG6-204ENST00000570606 ATF7IPQ6VMQ6 1270 aa7.97□□□□□ -1.13
SMG6-204ENST00000570606 TBC1D9Q6ZT07 1266 aa7.97□□□□□ -1.13
SMG6-204ENST00000570606 ANKRD13CQ8N6S4 541 aa7.97□□□□□ -1.13
SMG6-204ENST00000570606 ZNF384Q8TF68 577 aa7.97□□□□□ -1.13
SMG6-204ENST00000570606 COA7Q96BR5 231 aa7.97□□□□□ -1.13
SMG6-204ENST00000570606 NSUN4Q96CB9 384 aaKnown RBP7.97□□□□□ -1.13
SMG6-204ENST00000570606 OSBPL5Q9H0X9 879 aaPredicted RBP7.97□□□□□ -1.13
SMG6-204ENST00000570606 UNC93B1Q9H1C4 597 aa7.97□□□□□ -1.13
SMG6-204ENST00000570606 LRP2BPQ9P2M1 347 aa7.97□□□□□ -1.13
SMG6-204ENST00000570606 ALPK3Q96L96 1907 aa7.97□□□□□ -1.13
SMG6-204ENST00000570606 RANBP2P49792 3224 aaKnown RBP7.97□□□□□ -1.13
SMG6-204ENST00000570606 PNMA6EA0A0J9YXQ4 647 aa7.96□□□□□ -1.14
SMG6-204ENST00000570606 CCER2I3L3R5 266 aa7.96□□□□□ -1.14
SMG6-204ENST00000570606 MAP4K4O95819 1239 aaPredicted RBP7.96□□□□□ -1.14
SMG6-204ENST00000570606 MCAMP43121 646 aa7.96□□□□□ -1.14
SMG6-204ENST00000570606 HMGCS2P54868 508 aa7.96□□□□□ -1.14
SMG6-204ENST00000570606 MAP3K10Q02779 954 aa7.96□□□□□ -1.14
SMG6-204ENST00000570606 PABPC4Q13310 644 aaKnown RBP eCLIP7.96□□□□□ -1.14
SMG6-204ENST00000570606 FAM110CQ1W6H9 321 aa7.96□□□□□ -1.14
SMG6-204ENST00000570606 TREML2Q5T2D2 321 aa7.96□□□□□ -1.14
SMG6-204ENST00000570606 BRICD5Q6PL45 260 aa7.96□□□□□ -1.14
SMG6-204ENST00000570606 ZNF280CQ8ND82 737 aa7.96□□□□□ -1.14
SMG6-204ENST00000570606 U2AF1L4Q8WU68 220 aaKnown RBP7.96□□□□□ -1.14
SMG6-204ENST00000570606 THAP11Q96EK4 314 aa7.96□□□□□ -1.14
SMG6-204ENST00000570606 CCDC97Q96F63 343 aaPredicted RBP7.96□□□□□ -1.14
SMG6-204ENST00000570606 KRTAP3-3Q9BYR6 98 aa7.96□□□□□ -1.14
SMG6-204ENST00000570606 KRTAP3-2Q9BYR7 98 aa7.96□□□□□ -1.14
SMG6-204ENST00000570606 AS3MTQ9HBK9 375 aa7.96□□□□□ -1.14
SMG6-204ENST00000570606 TNNQ9UQP3 1299 aa7.96□□□□□ -1.14
SMG6-204ENST00000570606 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.96□□□□□ -1.14
SMG6-204ENST00000570606 SZT2Q5T011 3432 aa7.96□□□□□ -1.14
SMG6-204ENST00000570606 USP17L5A8MUK1 530 aa7.95□□□□□ -1.14
SMG6-204ENST00000570606 BCAR3O75815 825 aa7.95□□□□□ -1.14
SMG6-204ENST00000570606 BAG3O95817 575 aa7.95□□□□□ -1.14
SMG6-204ENST00000570606 IRX3P78415 501 aaPredicted RBP7.95□□□□□ -1.14
SMG6-204ENST00000570606 SPP2Q13103 211 aa7.95□□□□□ -1.14
SMG6-204ENST00000570606 NAA16Q6N069 864 aaPredicted RBP7.95□□□□□ -1.14
SMG6-204ENST00000570606 MAPKAPK5Q8IW41 473 aa7.95□□□□□ -1.14
SMG6-204ENST00000570606 SCUBE3Q8IX30 993 aa7.95□□□□□ -1.14
SMG6-204ENST00000570606 FTSJ3Q8IY81 847 aaKnown RBP7.95□□□□□ -1.14
SMG6-204ENST00000570606 SH3RF3Q8TEJ3 882 aaPredicted RBP7.95□□□□□ -1.14
SMG6-204ENST00000570606 GLMNQ92990 594 aa7.95□□□□□ -1.14
SMG6-204ENST00000570606 AATFQ9NY61 560 aaKnown RBP eCLIP7.95□□□□□ -1.14
SMG6-204ENST00000570606 HERC5Q9UII4 1024 aaKnown RBP7.95□□□□□ -1.14
SMG6-204ENST00000570606 NR2E3Q9Y5X4 410 aa7.95□□□□□ -1.14
SMG6-204ENST00000570606 NAV1Q8NEY1 1877 aa7.95□□□□□ -1.14
SMG6-204ENST00000570606 DDX60LQ5H9U9 1706 aaKnown RBP7.95□□□□□ -1.14
SMG6-204ENST00000570606 PLXNB2O15031 1838 aa7.94□□□□□ -1.14
SMG6-204ENST00000570606 MYH8P13535 1937 aa7.94□□□□□ -1.14
SMG6-204ENST00000570606 SGPL1O95470 568 aa7.94□□□□□ -1.14
SMG6-204ENST00000570606 TFRCP02786 760 aaKnown RBP7.94□□□□□ -1.14
SMG6-204ENST00000570606 HLA-DOAP06340 250 aa7.94□□□□□ -1.14
SMG6-204ENST00000570606 CAP2P40123 477 aa7.94□□□□□ -1.14
SMG6-204ENST00000570606 GCLCP48506 637 aaPredicted RBP7.94□□□□□ -1.14
SMG6-204ENST00000570606 NR6A1Q15406 480 aa7.94□□□□□ -1.14
SMG6-204ENST00000570606 TNNI3KQ59H18 835 aa7.94□□□□□ -1.14
SMG6-204ENST00000570606 CCDC158Q5M9N0 1113 aa7.94□□□□□ -1.14
SMG6-204ENST00000570606 ZKSCAN2Q63HK3 967 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms