RNA–Protein interactions for RNA: ENST00000568936.1

CCNDBP1-214, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 2,088 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-214ENST00000568936 RBM28Q9NW13 759 aaKnown RBP13.48□□□□□ -0.25
CCNDBP1-214ENST00000568936 V9GY48 417 aaPredicted RBP13.48□□□□□ -0.25
CCNDBP1-214ENST00000568936 PRPF3O43395 683 aaKnown RBP13.48□□□□□ -0.25
CCNDBP1-214ENST00000568936 NCLP19338 710 aaKnown RBP13.48□□□□□ -0.25
CCNDBP1-214ENST00000568936 TBC1D10BQ4KMP7 808 aaPredicted RBP13.48□□□□□ -0.25
CCNDBP1-214ENST00000568936 SIAH1Q8IUQ4 282 aa13.48□□□□□ -0.25
CCNDBP1-214ENST00000568936 LRRC47Q8N1G4 583 aaKnown RBP13.48□□□□□ -0.25
CCNDBP1-214ENST00000568936 TMEM87AQ8NBN3 555 aa13.48□□□□□ -0.25
CCNDBP1-214ENST00000568936 CTCFLQ8NI51 663 aaPredicted RBP13.48□□□□□ -0.25
CCNDBP1-214ENST00000568936 DPF2Q92785 391 aa13.48□□□□□ -0.25
CCNDBP1-214ENST00000568936 RNF26Q9BY78 433 aaPredicted RBP13.48□□□□□ -0.25
CCNDBP1-214ENST00000568936 TMOD2Q9NZR1 351 aa13.48□□□□□ -0.25
CCNDBP1-214ENST00000568936 KCNJ14Q9UNX9 436 aa13.48□□□□□ -0.25
CCNDBP1-214ENST00000568936 ATP6V1DQ9Y5K8 247 aa13.48□□□□□ -0.25
CCNDBP1-214ENST00000568936 PALM3A6NDB9 673 aaPredicted RBP13.47□□□□□ -0.25
CCNDBP1-214ENST00000568936 MPHOSPH10O00566 681 aaKnown RBP13.47□□□□□ -0.25
CCNDBP1-214ENST00000568936 CYTH3O43739 400 aa13.47□□□□□ -0.25
CCNDBP1-214ENST00000568936 GDF11O95390 407 aa13.47□□□□□ -0.25
CCNDBP1-214ENST00000568936 DEXIO95424 95 aa13.47□□□□□ -0.25
CCNDBP1-214ENST00000568936 TOP1P11387 765 aaKnown RBP13.47□□□□□ -0.25
CCNDBP1-214ENST00000568936 XRCC6P12956 609 aaKnown RBP eCLIP13.47□□□□□ -0.25
CCNDBP1-214ENST00000568936 KIF23Q02241 960 aaPredicted RBP13.47□□□□□ -0.25
CCNDBP1-214ENST00000568936 CERKLQ49MI3 558 aaPredicted RBP13.47□□□□□ -0.25
CCNDBP1-214ENST00000568936 FKBP1CQ5VVH2 108 aa13.47□□□□□ -0.25
CCNDBP1-214ENST00000568936 ZSCAN16Q9H4T2 348 aaPredicted RBP13.47□□□□□ -0.25
CCNDBP1-214ENST00000568936 CLIP2Q9UDT6 1046 aa13.47□□□□□ -0.25
CCNDBP1-214ENST00000568936 USP17L5A8MUK1 530 aa13.46□□□□□ -0.25
CCNDBP1-214ENST00000568936 USP17L2Q6R6M4 530 aa13.46□□□□□ -0.25
CCNDBP1-214ENST00000568936 TRIM22Q8IYM9 498 aa13.46□□□□□ -0.25
CCNDBP1-214ENST00000568936 PIBF1Q8WXW3 757 aa13.46□□□□□ -0.25
CCNDBP1-214ENST00000568936 MAP3K14Q99558 947 aa13.46□□□□□ -0.25
CCNDBP1-214ENST00000568936 ADAMTS3O15072 1205 aa13.46□□□□□ -0.26
CCNDBP1-214ENST00000568936 SEPT2Q15019 361 aa13.46□□□□□ -0.26
CCNDBP1-214ENST00000568936 FAM83AQ86UY5 434 aa13.46□□□□□ -0.26
CCNDBP1-214ENST00000568936 CCDC17Q96LX7 622 aa13.46□□□□□ -0.26
CCNDBP1-214ENST00000568936 GRPEL1Q9HAV7 217 aa13.46□□□□□ -0.26
CCNDBP1-214ENST00000568936 TRPM4Q8TD43 1214 aa13.45□□□□□ -0.26
CCNDBP1-214ENST00000568936 TEPSINQ96N21 525 aa13.45□□□□□ -0.26
CCNDBP1-214ENST00000568936 USP28Q96RU2 1077 aa13.45□□□□□ -0.26
CCNDBP1-214ENST00000568936 VPS54Q9P1Q0 977 aa13.45□□□□□ -0.26
CCNDBP1-214ENST00000568936 TTLL1O95922 423 aa13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 PDHBP11177 359 aa13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 EEF2P13639 858 aaKnown RBP13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 KIF5BP33176 963 aa13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 KRT85P78386 507 aa13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 RASA3Q14644 834 aa13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 TPRNQ4KMQ1 711 aa13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 MIGA2Q7L4E1 593 aa13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 OXER1Q8TDS5 423 aa13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 RBM27Q9P2N5 1060 aaKnown RBP13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 BTBD18B2RXH4 712 aa13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 MYO1BO43795 1136 aa13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 MBD3O95983 291 aa13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 MMP1P03956 469 aa13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 SNHG28P0DPA3 235 aa13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 EPS15P42566 896 aa13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 CEBPZQ03701 1054 aaKnown RBP13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 NPY5RQ15761 445 aa13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 ABCB5Q2M3G0 1257 aa13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 KIF4BQ2VIQ3 1234 aa13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 RGS22Q8NE09 1264 aa13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 LEO1Q8WVC0 666 aaPredicted RBP13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 GPRC5DQ9NZD1 345 aa13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 HACL1Q9UJ83 578 aa13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 POLR2AP24928 1970 aaKnown RBP13.44□□□□□ -0.26
CCNDBP1-214ENST00000568936 FRMPD2Q68DX3 1309 aaPredicted RBP13.43□□□□□ -0.26
CCNDBP1-214ENST00000568936 ATAD5Q96QE3 1844 aa13.43□□□□□ -0.26
CCNDBP1-214ENST00000568936 KLRF2D3W0D1 207 aa13.43□□□□□ -0.26
CCNDBP1-214ENST00000568936 DDNO94850 711 aaPredicted RBP13.43□□□□□ -0.26
CCNDBP1-214ENST00000568936 GH2P01242 217 aa13.43□□□□□ -0.26
CCNDBP1-214ENST00000568936 HIRAP54198 1017 aaPredicted RBP13.43□□□□□ -0.26
CCNDBP1-214ENST00000568936 ATP2B2Q01814 1243 aa13.43□□□□□ -0.26
CCNDBP1-214ENST00000568936 GPC2Q8N158 579 aa13.43□□□□□ -0.26
CCNDBP1-214ENST00000568936 WASF1Q92558 559 aa13.43□□□□□ -0.26
CCNDBP1-214ENST00000568936 TRIM34Q9BYJ4 488 aa13.43□□□□□ -0.26
CCNDBP1-214ENST00000568936 RNF181Q9P0P0 153 aa13.43□□□□□ -0.26
CCNDBP1-214ENST00000568936 HERC5Q9UII4 1024 aaKnown RBP13.43□□□□□ -0.26
CCNDBP1-214ENST00000568936 PARP1P09874 1014 aaKnown RBP13.43□□□□□ -0.26
CCNDBP1-214ENST00000568936 U2AF2P26368 475 aaKnown RBP eCLIP13.43□□□□□ -0.26
CCNDBP1-214ENST00000568936 ZNF445P59923 1031 aa13.43□□□□□ -0.26
CCNDBP1-214ENST00000568936 NR5A1Q13285 461 aa13.43□□□□□ -0.26
CCNDBP1-214ENST00000568936 MYSM1Q5VVJ2 828 aa13.43□□□□□ -0.26
CCNDBP1-214ENST00000568936 TYW1BQ6NUM6 668 aa13.43□□□□□ -0.26
CCNDBP1-214ENST00000568936 PGBD1Q96JS3 809 aa13.43□□□□□ -0.26
CCNDBP1-214ENST00000568936 UBA5Q9GZZ9 404 aa13.43□□□□□ -0.26
CCNDBP1-214ENST00000568936 A0A1W2PRG0 241 aa13.42□□□□□ -0.26
CCNDBP1-214ENST00000568936 SCG2P13521 617 aa13.42□□□□□ -0.26
CCNDBP1-214ENST00000568936 MMP14P50281 582 aa13.42□□□□□ -0.26
CCNDBP1-214ENST00000568936 AKAP17AQ02040 695 aaKnown RBP13.42□□□□□ -0.26
CCNDBP1-214ENST00000568936 MAP3K10Q02779 954 aa13.42□□□□□ -0.26
CCNDBP1-214ENST00000568936 PFKFB3Q16875 520 aaPredicted RBP13.42□□□□□ -0.26
CCNDBP1-214ENST00000568936 NOM1Q5C9Z4 860 aaKnown RBP13.42□□□□□ -0.26
CCNDBP1-214ENST00000568936 TTBK2Q6IQ55 1244 aa13.42□□□□□ -0.26
CCNDBP1-214ENST00000568936 CAVIN1Q6NZI2 390 aaKnown RBP13.42□□□□□ -0.26
CCNDBP1-214ENST00000568936 TMEM179Q6ZVK1 233 aa13.42□□□□□ -0.26
CCNDBP1-214ENST00000568936 GAS2L3Q86XJ1 694 aa13.42□□□□□ -0.26
CCNDBP1-214ENST00000568936 DIS3L2Q8IYB7 885 aaKnown RBP13.42□□□□□ -0.26
CCNDBP1-214ENST00000568936 GPKOWQ92917 476 aaPredicted RBP eCLIP13.42□□□□□ -0.265e-6■□□□□ 9.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms