RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 USP17L21D6R901 530 aa18.43■□□□□ 0.54
CDR2-206ENST00000567406 PTPREP23469 700 aa18.43■□□□□ 0.54
CDR2-206ENST00000567406 CCNA1P78396 465 aa18.43■□□□□ 0.54
CDR2-206ENST00000567406 TSHZ3Q63HK5 1081 aa18.43■□□□□ 0.54
CDR2-206ENST00000567406 LHX8Q68G74 356 aa18.43■□□□□ 0.54
CDR2-206ENST00000567406 ANKLE1Q8NAG6 615 aa18.43■□□□□ 0.54
CDR2-206ENST00000567406 NPLOC4Q8TAT6 608 aa18.43■□□□□ 0.54
CDR2-206ENST00000567406 PUS7LQ9H0K6 701 aaKnown RBP18.43■□□□□ 0.54
CDR2-206ENST00000567406 SLC4A4Q9Y6R1 1079 aa18.43■□□□□ 0.54
CDR2-206ENST00000567406 CAPN2P17655 700 aa18.42■□□□□ 0.54
CDR2-206ENST00000567406 CDK8P49336 464 aa18.42■□□□□ 0.54
CDR2-206ENST00000567406 LBX2Q6XYB7 198 aa18.42■□□□□ 0.54
CDR2-206ENST00000567406 TMEM179Q6ZVK1 233 aa18.42■□□□□ 0.54
CDR2-206ENST00000567406 TRMT44Q8IYL2 757 aaKnown RBP18.42■□□□□ 0.54
CDR2-206ENST00000567406 STK11IPQ8N1F8 1099 aa18.42■□□□□ 0.54
CDR2-206ENST00000567406 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.42■□□□□ 0.54
CDR2-206ENST00000567406 ATP8A2Q9NTI2 1148 aa18.42■□□□□ 0.54
CDR2-206ENST00000567406 DNAH12Q6ZR08 3092 aa18.42■□□□□ 0.54
CDR2-206ENST00000567406 PFASO15067 1338 aa18.42■□□□□ 0.54
CDR2-206ENST00000567406 SLC15A5A6NIM6 579 aa18.41■□□□□ 0.54
CDR2-206ENST00000567406 COG2Q14746 738 aa18.41■□□□□ 0.54
CDR2-206ENST00000567406 C12orf60Q5U649 245 aa18.41■□□□□ 0.54
CDR2-206ENST00000567406 MOV10L1Q9BXT6 1211 aaKnown RBP18.41■□□□□ 0.54
CDR2-206ENST00000567406 CHMP4BQ9H444 224 aaKnown RBP18.41■□□□□ 0.54
CDR2-206ENST00000567406 SWAP70Q9UH65 585 aa18.41■□□□□ 0.54
CDR2-206ENST00000567406 SOX1O00570 391 aaPredicted RBP18.4■□□□□ 0.54
CDR2-206ENST00000567406 GLRX3O76003 335 aaKnown RBP18.4■□□□□ 0.54
CDR2-206ENST00000567406 CYP2C19P33261 490 aa18.4■□□□□ 0.54
CDR2-206ENST00000567406 ATP2B2Q01814 1243 aa18.4■□□□□ 0.54
CDR2-206ENST00000567406 ICA1Q05084 483 aa18.4■□□□□ 0.54
CDR2-206ENST00000567406 GRB14Q14449 540 aa18.4■□□□□ 0.54
CDR2-206ENST00000567406 UBE3CQ15386 1083 aa18.4■□□□□ 0.54
CDR2-206ENST00000567406 CTR9Q6PD62 1173 aa18.4■□□□□ 0.54
CDR2-206ENST00000567406 IVNS1ABPQ9Y6Y0 642 aa18.4■□□□□ 0.54
CDR2-206ENST00000567406 MYH8P13535 1937 aa18.39■□□□□ 0.53
CDR2-206ENST00000567406 RLFQ13129 1914 aa18.39■□□□□ 0.53
CDR2-206ENST00000567406 CNGA1P29973 690 aa18.39■□□□□ 0.53
CDR2-206ENST00000567406 PLS1Q14651 629 aa18.39■□□□□ 0.53
CDR2-206ENST00000567406 MFSD14CQ5VZR4 134 aa18.39■□□□□ 0.53
CDR2-206ENST00000567406 TRPV1Q8NER1 839 aa18.39■□□□□ 0.53
CDR2-206ENST00000567406 ATG4CQ96DT6 458 aa18.39■□□□□ 0.53
CDR2-206ENST00000567406 HOXC10Q9NYD6 342 aa18.39■□□□□ 0.53
CDR2-206ENST00000567406 MYH7P12883 1935 aa18.39■□□□□ 0.53
CDR2-206ENST00000567406 FLOT1O75955 427 aa18.38■□□□□ 0.53
CDR2-206ENST00000567406 ERCC3P19447 782 aa18.38■□□□□ 0.53
CDR2-206ENST00000567406 DSG3P32926 999 aa18.38■□□□□ 0.53
CDR2-206ENST00000567406 C16orf86Q6ZW13 317 aa18.38■□□□□ 0.53
CDR2-206ENST00000567406 LRCH3Q96II8 777 aa18.38■□□□□ 0.53
CDR2-206ENST00000567406 SPATC1LQ9H0A9 340 aa18.38■□□□□ 0.53
CDR2-206ENST00000567406 ARHGEF10LQ9HCE6 1279 aa18.38■□□□□ 0.53
CDR2-206ENST00000567406 ECHDC1Q9NTX5 307 aa18.38■□□□□ 0.53
CDR2-206ENST00000567406 TMX2Q9Y320 296 aa18.38■□□□□ 0.53
CDR2-206ENST00000567406 RAD21O60216 631 aa18.37■□□□□ 0.53
CDR2-206ENST00000567406 COBLO75128 1261 aa18.37■□□□□ 0.53
CDR2-206ENST00000567406 EEF2P13639 858 aaKnown RBP18.37■□□□□ 0.53
CDR2-206ENST00000567406 ADORA2AP29274 412 aa18.37■□□□□ 0.53
CDR2-206ENST00000567406 LRRC26Q2I0M4 334 aa18.37■□□□□ 0.53
CDR2-206ENST00000567406 DPP9Q86TI2 863 aa18.37■□□□□ 0.53
CDR2-206ENST00000567406 VCPKMTQ9H867 229 aa18.37■□□□□ 0.53
CDR2-206ENST00000567406 HOXC6P09630 235 aa18.36■□□□□ 0.53
CDR2-206ENST00000567406 COL6A1P12109 1028 aa18.36■□□□□ 0.53
CDR2-206ENST00000567406 ANO1Q5XXA6 986 aa18.36■□□□□ 0.53
CDR2-206ENST00000567406 ZSCAN25Q6NSZ9 544 aa18.36■□□□□ 0.53
CDR2-206ENST00000567406 NCAPG2Q86XI2 1143 aa18.36■□□□□ 0.53
CDR2-206ENST00000567406 AMOTL1Q8IY63 956 aa18.36■□□□□ 0.53
CDR2-206ENST00000567406 OSBP2Q969R2 916 aa18.36■□□□□ 0.53
CDR2-206ENST00000567406 DDRGK1Q96HY6 314 aa18.36■□□□□ 0.53
CDR2-206ENST00000567406 STRBPQ96SI9 672 aaKnown RBP18.36■□□□□ 0.53
CDR2-206ENST00000567406 GDF15Q99988 308 aa18.36■□□□□ 0.53
CDR2-206ENST00000567406 DCTPP1Q9H773 170 aa18.36■□□□□ 0.53
CDR2-206ENST00000567406 FBXO28Q9NVF7 368 aa18.36■□□□□ 0.53
CDR2-206ENST00000567406 MAGEA10P43363 369 aaPredicted RBP18.35■□□□□ 0.53
CDR2-206ENST00000567406 TMEM132BQ14DG7 1078 aa18.35■□□□□ 0.53
CDR2-206ENST00000567406 PRAMEF19Q5SWL8 479 aa18.35■□□□□ 0.53
CDR2-206ENST00000567406 CCDC17Q96LX7 622 aa18.35■□□□□ 0.53
CDR2-206ENST00000567406 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.35■□□□□ 0.53
CDR2-206ENST00000567406 SENP6Q9GZR1 1112 aaPredicted RBP18.35■□□□□ 0.53
CDR2-206ENST00000567406 DDX20Q9UHI6 824 aaKnown RBP18.35■□□□□ 0.53
CDR2-206ENST00000567406 GSG1L2A8MUP6 293 aa18.34■□□□□ 0.53
CDR2-206ENST00000567406 MINDY4BA8MYZ0 360 aa18.34■□□□□ 0.53
CDR2-206ENST00000567406 LPAR1Q92633 364 aa18.34■□□□□ 0.53
CDR2-206ENST00000567406 FRMPD3Q5JV73 1810 aa18.33■□□□□ 0.53
CDR2-206ENST00000567406 IGHA2P01877 340 aa18.33■□□□□ 0.52
CDR2-206ENST00000567406 ATN1P54259 1190 aaPredicted RBP18.33■□□□□ 0.52
CDR2-206ENST00000567406 FAM83BQ5T0W9 1011 aa18.33■□□□□ 0.52
CDR2-206ENST00000567406 KBTBD3Q8NAB2 608 aa18.33■□□□□ 0.52
CDR2-206ENST00000567406 NUP88Q99567 741 aaPredicted RBP18.33■□□□□ 0.52
CDR2-206ENST00000567406 SH2D4AQ9H788 454 aa18.33■□□□□ 0.52
CDR2-206ENST00000567406 KANSL2Q9H9L4 492 aa18.33■□□□□ 0.52
CDR2-206ENST00000567406 PCDHB15Q9Y5E8 787 aa18.33■□□□□ 0.52
CDR2-206ENST00000567406 A0A0G2JMZ2 1700 aa18.32■□□□□ 0.52
CDR2-206ENST00000567406 M0R2C6 588 aa18.32■□□□□ 0.52
CDR2-206ENST00000567406 WDR46O15213 610 aaKnown RBP18.32■□□□□ 0.52
CDR2-206ENST00000567406 RNF113AO15541 343 aaKnown RBP18.32■□□□□ 0.52
CDR2-206ENST00000567406 STRNO43815 780 aa18.32■□□□□ 0.52
CDR2-206ENST00000567406 MYCNP04198 464 aaPredicted RBP18.32■□□□□ 0.52
CDR2-206ENST00000567406 CYBAP13498 195 aa18.32■□□□□ 0.52
CDR2-206ENST00000567406 RASA1P20936 1047 aa18.32■□□□□ 0.52
CDR2-206ENST00000567406 GJC2Q5T442 439 aaPredicted RBP18.32■□□□□ 0.52
CDR2-206ENST00000567406 MB21D1Q8N884 522 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms