RNA–Protein interactions for RNA: ENST00000566655.1

VAC14-208, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 5

Gene VAC14, Length 1,391 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-208ENST00000566655 KIF28PB7ZC32 967 aa18.35■□□□□ 0.53
VAC14-208ENST00000566655 TRAK2O60296 914 aa18.35■□□□□ 0.53
VAC14-208ENST00000566655 PRPF40AO75400 957 aaKnown RBP18.35■□□□□ 0.53
VAC14-208ENST00000566655 PTMSP20962 102 aa18.35■□□□□ 0.53
VAC14-208ENST00000566655 KIF5BP33176 963 aa18.35■□□□□ 0.53
VAC14-208ENST00000566655 TMEM179Q6ZVK1 233 aa18.35■□□□□ 0.53
VAC14-208ENST00000566655 WASF1Q92558 559 aa18.35■□□□□ 0.53
VAC14-208ENST00000566655 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.35■□□□□ 0.53
VAC14-208ENST00000566655 GDPD2Q9HCC8 539 aa18.35■□□□□ 0.53
VAC14-208ENST00000566655 RNF181Q9P0P0 153 aa18.35■□□□□ 0.53
VAC14-208ENST00000566655 NYAP2Q9P242 653 aa18.35■□□□□ 0.53
VAC14-208ENST00000566655 CLIP2Q9UDT6 1046 aa18.35■□□□□ 0.53
VAC14-208ENST00000566655 HACL1Q9UJ83 578 aa18.35■□□□□ 0.53
VAC14-208ENST00000566655 SRCAPQ6ZRS2 3230 aa18.35■□□□□ 0.53
VAC14-208ENST00000566655 USP17L5A8MUK1 530 aa18.34■□□□□ 0.53
VAC14-208ENST00000566655 GOLGA6L22H0YM25 854 aa18.34■□□□□ 0.53
VAC14-208ENST00000566655 H7C1D1 291 aa18.34■□□□□ 0.53
VAC14-208ENST00000566655 MPHOSPH10O00566 681 aaKnown RBP18.34■□□□□ 0.53
VAC14-208ENST00000566655 CYTH3O43739 400 aa18.34■□□□□ 0.53
VAC14-208ENST00000566655 PDHBP11177 359 aa18.34■□□□□ 0.53
VAC14-208ENST00000566655 GNAQP50148 359 aa18.34■□□□□ 0.53
VAC14-208ENST00000566655 HIRAP54198 1017 aaPredicted RBP18.34■□□□□ 0.53
VAC14-208ENST00000566655 SEPT2Q15019 361 aa18.34■□□□□ 0.53
VAC14-208ENST00000566655 ABCB5Q2M3G0 1257 aa18.34■□□□□ 0.53
VAC14-208ENST00000566655 C9orf131Q5VYM1 1079 aa18.34■□□□□ 0.53
VAC14-208ENST00000566655 USP48Q86UV5 1035 aa18.34■□□□□ 0.53
VAC14-208ENST00000566655 LRRC47Q8N1G4 583 aaKnown RBP18.34■□□□□ 0.53
VAC14-208ENST00000566655 TRIM34Q9BYJ4 488 aa18.34■□□□□ 0.53
VAC14-208ENST00000566655 KANSL2Q9H9L4 492 aa18.34■□□□□ 0.53
VAC14-208ENST00000566655 SCAF8Q9UPN6 1271 aaKnown RBP18.34■□□□□ 0.53
VAC14-208ENST00000566655 DDNO94850 711 aaPredicted RBP18.33■□□□□ 0.53
VAC14-208ENST00000566655 GDF11O95390 407 aa18.33■□□□□ 0.53
VAC14-208ENST00000566655 EEF2P13639 858 aaKnown RBP18.33■□□□□ 0.53
VAC14-208ENST00000566655 VEGFAP15692 232 aaPredicted RBP18.33■□□□□ 0.53
VAC14-208ENST00000566655 EPS15P42566 896 aa18.33■□□□□ 0.53
VAC14-208ENST00000566655 PPP4R3BQ5MIZ7 849 aa18.33■□□□□ 0.53
VAC14-208ENST00000566655 USP17L2Q6R6M4 530 aa18.33■□□□□ 0.53
VAC14-208ENST00000566655 LZTS2Q9BRK4 669 aa18.33■□□□□ 0.53
VAC14-208ENST00000566655 hCG_1642624A0A1W2PR95 340 aa18.32■□□□□ 0.52
VAC14-208ENST00000566655 PHF20L1A8MW92 1017 aa18.32■□□□□ 0.52
VAC14-208ENST00000566655 GH2P01242 217 aa18.32■□□□□ 0.52
VAC14-208ENST00000566655 U2AF2P26368 475 aaKnown RBP eCLIP18.32■□□□□ 0.52
VAC14-208ENST00000566655 SMARCA1P28370 1054 aa18.32■□□□□ 0.52
VAC14-208ENST00000566655 TNNI2P48788 182 aa18.32■□□□□ 0.52
VAC14-208ENST00000566655 PFKFB3Q16875 520 aaPredicted RBP18.32■□□□□ 0.52
VAC14-208ENST00000566655 SPZ1Q9BXG8 430 aa18.32■□□□□ 0.52
VAC14-208ENST00000566655 DICER1Q9UPY3 1922 aaKnown RBP18.31■□□□□ 0.52
VAC14-208ENST00000566655 MMP1P03956 469 aa18.31■□□□□ 0.52
VAC14-208ENST00000566655 PARP1P09874 1014 aaKnown RBP18.31■□□□□ 0.52
VAC14-208ENST00000566655 GOLGA8HP0CJ92 632 aa18.31■□□□□ 0.52
VAC14-208ENST00000566655 TNFAIP1Q13829 316 aa18.31■□□□□ 0.52
VAC14-208ENST00000566655 NPY5RQ15761 445 aa18.31■□□□□ 0.52
VAC14-208ENST00000566655 MIGA2Q7L4E1 593 aa18.31■□□□□ 0.52
VAC14-208ENST00000566655 GPT2Q8TD30 523 aa18.31■□□□□ 0.52
VAC14-208ENST00000566655 PHF20Q9BVI0 1012 aa18.31■□□□□ 0.52
VAC14-208ENST00000566655 DEFB129Q9H1M3 183 aa18.31■□□□□ 0.52
VAC14-208ENST00000566655 SBF1O95248 1867 aa18.31■□□□□ 0.52
VAC14-208ENST00000566655 KLRF2D3W0D1 207 aa18.3■□□□□ 0.52
VAC14-208ENST00000566655 GADD45BO75293 160 aaPredicted RBP18.3■□□□□ 0.52
VAC14-208ENST00000566655 KRT85P78386 507 aa18.3■□□□□ 0.52
VAC14-208ENST00000566655 ZNF543Q08ER8 600 aa18.3■□□□□ 0.52
VAC14-208ENST00000566655 TFIP11Q9UBB9 837 aaKnown RBP18.3■□□□□ 0.52
VAC14-208ENST00000566655 KCNJ14Q9UNX9 436 aa18.3■□□□□ 0.52
VAC14-208ENST00000566655 MTMR7Q9Y216 660 aa18.3■□□□□ 0.52
VAC14-208ENST00000566655 A0A1W2PRG0 241 aa18.3■□□□□ 0.52
VAC14-208ENST00000566655 SCG2P13521 617 aa18.3■□□□□ 0.52
VAC14-208ENST00000566655 AKAP17AQ02040 695 aaKnown RBP18.3■□□□□ 0.52
VAC14-208ENST00000566655 ICA1Q05084 483 aa18.3■□□□□ 0.52
VAC14-208ENST00000566655 KLHL40Q2TBA0 621 aa18.3■□□□□ 0.52
VAC14-208ENST00000566655 SKOR2Q2VWA4 1001 aaPredicted RBP18.3■□□□□ 0.52
VAC14-208ENST00000566655 ASPRV1Q53RT3 343 aa18.3■□□□□ 0.52
VAC14-208ENST00000566655 ATL3Q6DD88 541 aa18.3■□□□□ 0.52
VAC14-208ENST00000566655 BRAPQ7Z569 592 aa18.3■□□□□ 0.52
VAC14-208ENST00000566655 CPVLQ9H3G5 476 aa18.3■□□□□ 0.52
VAC14-208ENST00000566655 RIOX1Q9H6W3 641 aa18.3■□□□□ 0.52
VAC14-208ENST00000566655 VPS54Q9P1Q0 977 aa18.3■□□□□ 0.52
VAC14-208ENST00000566655 RBM27Q9P2N5 1060 aaKnown RBP18.3■□□□□ 0.52
VAC14-208ENST00000566655 ELP1O95163 1332 aa18.29■□□□□ 0.52
VAC14-208ENST00000566655 FIBPO43427 364 aa18.29■□□□□ 0.52
VAC14-208ENST00000566655 TRIM29Q14134 588 aa18.29■□□□□ 0.52
VAC14-208ENST00000566655 ANGEL2Q5VTE6 544 aaKnown RBP18.29■□□□□ 0.52
VAC14-208ENST00000566655 LEO1Q8WVC0 666 aaPredicted RBP18.29■□□□□ 0.52
VAC14-208ENST00000566655 USP28Q96RU2 1077 aa18.29■□□□□ 0.52
VAC14-208ENST00000566655 RCOR1Q9UKL0 485 aa18.29■□□□□ 0.52
VAC14-208ENST00000566655 ZBTB21Q9ULJ3 1066 aa18.29■□□□□ 0.52
VAC14-208ENST00000566655 SYNPO2Q9UMS6 1093 aa18.29■□□□□ 0.52
VAC14-208ENST00000566655 BTBD18B2RXH4 712 aa18.28■□□□□ 0.52
VAC14-208ENST00000566655 CAP2P40123 477 aa18.28■□□□□ 0.52
VAC14-208ENST00000566655 NBPF12Q5TAG4 269 aaPredicted RBP18.28■□□□□ 0.52
VAC14-208ENST00000566655 MYSM1Q5VVJ2 828 aa18.28■□□□□ 0.52
VAC14-208ENST00000566655 APOBEC3FQ8IUX4 373 aaKnown RBP18.28■□□□□ 0.52
VAC14-208ENST00000566655 DIS3L2Q8IYB7 885 aaKnown RBP18.28■□□□□ 0.52
VAC14-208ENST00000566655 GMCL1P1Q8NEA9 526 aa18.28■□□□□ 0.52
VAC14-208ENST00000566655 OXER1Q8TDS5 423 aa18.28■□□□□ 0.52
VAC14-208ENST00000566655 TNFRSF25Q93038 417 aa18.28■□□□□ 0.52
VAC14-208ENST00000566655 L3MBTL3Q96JM7 780 aaPredicted RBP18.28■□□□□ 0.52
VAC14-208ENST00000566655 FTOQ9C0B1 505 aaKnown RBP eCLIP18.28■□□□□ 0.52
VAC14-208ENST00000566655 FOXP1Q9H334 677 aaPredicted RBP18.28■□□□□ 0.52
VAC14-208ENST00000566655 CABP5Q9NP86 173 aa18.28■□□□□ 0.52
VAC14-208ENST00000566655 FRMPD2Q68DX3 1309 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms