RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 BAG3O95817 575 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 PFKFB1P16118 471 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 GNL1P36915 607 aaPredicted RBP3.25□□□□□ -1.89
CHD9-218ENST00000566029 SPECC1LQ69YQ0 1117 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 BLOC1S2Q6QNY1 142 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 ELOA2Q8IYF1 753 aaPredicted RBP3.25□□□□□ -1.89
CHD9-218ENST00000566029 CCDC170Q8IYT3 715 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 KIRREL3Q8IZU9 778 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 B4GALNT2Q8NHY0 566 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 RPGRIP1Q96KN7 1286 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 SPATA17Q96L03 361 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 ECHDC1Q9NTX5 307 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 PNMA6EA0A0J9YXQ4 647 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 JAK2O60674 1132 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 PSMC1P62191 440 aaKnown RBP3.25□□□□□ -1.89
CHD9-218ENST00000566029 CREB3L3Q68CJ9 461 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 CEP57Q86XR8 500 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 TAB3Q8N5C8 712 aaPredicted RBP3.25□□□□□ -1.89
CHD9-218ENST00000566029 MLKLQ8NB16 471 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 STAMBPL1Q96FJ0 436 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 SLC5A4Q9NY91 659 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 BLOC1S6Q9UL45 172 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.25□□□□□ -1.89
CHD9-218ENST00000566029 SALL1Q9NSC2 1324 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 USP32Q8NFA0 1604 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 KIF28PB7ZC32 967 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 NBPF7P0C2Y1 421 aaPredicted RBP3.25□□□□□ -1.89
CHD9-218ENST00000566029 ALADP13716 330 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 CCDC38Q502W7 563 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 SHQ1Q6PI26 577 aaKnown RBP3.25□□□□□ -1.89
CHD9-218ENST00000566029 TMCO5AQ8N6Q1 288 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 IFT43Q96FT9 208 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 ARHGEF10O15013 1369 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 IQGAP1P46940 1657 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 LRRC7Q96NW7 1537 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 LRIG3Q6UXM1 1119 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 GSDMBQ8TAX9 411 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 DTNBP1Q96EV8 351 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 PLIN2Q99541 437 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 ZFATQ9P243 1243 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 MYO1AQ9UBC5 1043 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 LEMD3Q9Y2U8 911 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 ANKARQ7Z5J8 1434 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 IMPDH2P12268 514 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 EZRP15311 586 aaKnown RBP3.24□□□□□ -1.89
CHD9-218ENST00000566029 MAN1A1P33908 653 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 EPS15P42566 896 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 ITIH3Q06033 890 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 EZH2Q15910 746 aaKnown RBP3.24□□□□□ -1.89
CHD9-218ENST00000566029 CCDC96Q2M329 555 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 EFCAB2Q5VUJ9 269 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 MYSM1Q5VVJ2 828 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 BZW1Q7L1Q6 419 aaKnown RBP3.24□□□□□ -1.89
CHD9-218ENST00000566029 HEATR4Q86WZ0 1026 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 RNF168Q8IYW5 571 aaPredicted RBP3.24□□□□□ -1.89
CHD9-218ENST00000566029 OPTNQ96CV9 577 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 SDF4Q9BRK5 362 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 PYM1Q9BRP8 204 aaKnown RBP3.24□□□□□ -1.89
CHD9-218ENST00000566029 MRPL46Q9H2W6 279 aaKnown RBP3.24□□□□□ -1.89
CHD9-218ENST00000566029 CDC42BPAQ5VT25 1732 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 NCAPD2Q15021 1401 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 RNF225M0QZC1 329 aaPredicted RBP3.24□□□□□ -1.89
CHD9-218ENST00000566029 PSMD14O00487 310 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 CHMP2AO43633 222 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 ALDH1L1O75891 902 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 BRCC3P46736 316 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 PSMD6Q15008 389 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 CDKAL1Q5VV42 579 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 CCDC174Q6PII3 467 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 SPATA21Q7Z572 469 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 APBB1IPQ7Z5R6 666 aaPredicted RBP3.24□□□□□ -1.89
CHD9-218ENST00000566029 SCLT1Q96NL6 688 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 NRDE2Q9H7Z3 1164 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 ABLIM1O14639 778 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 OPLAHO14841 1288 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 FDPSP14324 419 aaKnown RBP3.24□□□□□ -1.89
CHD9-218ENST00000566029 ZMYM1Q5SVZ6 1142 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 ALS2CLQ60I27 953 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 OTUD7BQ6GQQ9 843 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 LIMA1Q9UHB6 759 aaKnown RBP3.24□□□□□ -1.89
CHD9-218ENST00000566029 IQGAP3Q86VI3 1631 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 DIP2AQ14689 1571 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 ERCC6L2Q5T890 1561 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 KIF5CO60282 957 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 TAF5LO75529 589 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 TNFRSF8P28908 595 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 AMOTQ4VCS5 1084 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 KCNG4Q8TDN1 519 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 NSMCE1Q8WV22 266 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 RSRC1Q96IZ7 334 aaKnown RBP3.24□□□□□ -1.89
CHD9-218ENST00000566029 SELENOOQ9BVL4 669 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 STK31Q9BXU1 1019 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 CABP2Q9NPB3 220 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 RAPGEF6Q8TEU7 1601 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 NDUFAB1O14561 156 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 GNAT1P11488 350 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 MCM3P25205 808 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 IFFO1Q0D2I5 559 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 PTPN21Q16825 1174 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 PPP4R3AQ6IN85 833 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms