RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 RASA1P20936 1047 aa23.88■■□□□ 1.41
SHCBP1-203ENST00000564272 MAPK4P31152 587 aa23.88■■□□□ 1.41
SHCBP1-203ENST00000564272 ATP2B2Q01814 1243 aa23.88■■□□□ 1.41
SHCBP1-203ENST00000564272 CCDC129Q6ZRS4 1044 aa23.88■■□□□ 1.41
SHCBP1-203ENST00000564272 IFNL3Q8IZI9 196 aa23.88■■□□□ 1.41
SHCBP1-203ENST00000564272 SPICE1Q8N0Z3 855 aa23.88■■□□□ 1.41
SHCBP1-203ENST00000564272 EVI5LQ96CN4 794 aa23.88■■□□□ 1.41
SHCBP1-203ENST00000564272 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.88■■□□□ 1.41
SHCBP1-203ENST00000564272 SH2D4AQ9H788 454 aa23.88■■□□□ 1.41
SHCBP1-203ENST00000564272 TMX2Q9Y320 296 aa23.88■■□□□ 1.41
SHCBP1-203ENST00000564272 RLFQ13129 1914 aa23.87■■□□□ 1.41
SHCBP1-203ENST00000564272 EEF2P13639 858 aaKnown RBP23.87■■□□□ 1.41
SHCBP1-203ENST00000564272 LBX2Q6XYB7 198 aa23.87■■□□□ 1.41
SHCBP1-203ENST00000564272 GPR142Q7Z601 462 aa23.87■■□□□ 1.41
SHCBP1-203ENST00000564272 CCAR1Q8IX12 1150 aaKnown RBP23.87■■□□□ 1.41
SHCBP1-203ENST00000564272 VCPKMTQ9H867 229 aa23.87■■□□□ 1.41
SHCBP1-203ENST00000564272 BTBD7Q9P203 1132 aa23.87■■□□□ 1.41
SHCBP1-203ENST00000564272 GJB1P08034 283 aa23.86■■□□□ 1.41
SHCBP1-203ENST00000564272 CYP2B6P20813 491 aa23.86■■□□□ 1.41
SHCBP1-203ENST00000564272 LPAR1Q92633 364 aa23.86■■□□□ 1.41
SHCBP1-203ENST00000564272 KANSL2Q9H9L4 492 aa23.86■■□□□ 1.41
SHCBP1-203ENST00000564272 MKNK2Q9HBH9 465 aa23.86■■□□□ 1.41
SHCBP1-203ENST00000564272 A0A0G2JMZ2 1700 aa23.86■■□□□ 1.41
SHCBP1-203ENST00000564272 MKI67P46013 3256 aaKnown RBP23.85■■□□□ 1.41
SHCBP1-203ENST00000564272 PRDM1O75626 825 aa23.85■■□□□ 1.41
SHCBP1-203ENST00000564272 PLEKHH3Q7Z736 793 aa23.85■■□□□ 1.41
SHCBP1-203ENST00000564272 SOCS4Q8WXH5 440 aa23.85■■□□□ 1.41
SHCBP1-203ENST00000564272 NUDT12Q9BQG2 462 aa23.85■■□□□ 1.41
SHCBP1-203ENST00000564272 NACAP1Q9BZK3 213 aa23.85■■□□□ 1.41
SHCBP1-203ENST00000564272 FOXP2O15409 715 aa23.84■■□□□ 1.41
SHCBP1-203ENST00000564272 HMGCRP04035 888 aa23.84■■□□□ 1.41
SHCBP1-203ENST00000564272 GJA8P48165 433 aa23.84■■□□□ 1.41
SHCBP1-203ENST00000564272 CCNA1P78396 465 aa23.84■■□□□ 1.41
SHCBP1-203ENST00000564272 TRIM32Q13049 653 aa23.84■■□□□ 1.41
SHCBP1-203ENST00000564272 COG2Q14746 738 aa23.84■■□□□ 1.41
SHCBP1-203ENST00000564272 PRPF38BQ5VTL8 546 aaKnown RBP23.84■■□□□ 1.41
SHCBP1-203ENST00000564272 CHD1LQ86WJ1 897 aa23.84■■□□□ 1.41
SHCBP1-203ENST00000564272 TRIB2Q92519 343 aa23.84■■□□□ 1.41
SHCBP1-203ENST00000564272 NAPBQ9H115 298 aa23.84■■□□□ 1.41
SHCBP1-203ENST00000564272 CWC22Q9HCG8 908 aaKnown RBP23.84■■□□□ 1.41
SHCBP1-203ENST00000564272 PARP14Q460N5 1801 aa23.84■■□□□ 1.41
SHCBP1-203ENST00000564272 IRX6P78412 446 aaPredicted RBP23.83■■□□□ 1.41
SHCBP1-203ENST00000564272 NUCB1Q02818 461 aa23.83■■□□□ 1.41
SHCBP1-203ENST00000564272 MORN1Q5T089 497 aa23.83■■□□□ 1.41
SHCBP1-203ENST00000564272 WDR78Q5VTH9 848 aa23.83■■□□□ 1.41
SHCBP1-203ENST00000564272 NKX2-3Q8TAU0 364 aa23.83■■□□□ 1.41
SHCBP1-203ENST00000564272 U2AF1L4Q8WU68 220 aaKnown RBP23.83■■□□□ 1.41
SHCBP1-203ENST00000564272 WDR46O15213 610 aaKnown RBP23.82■■□□□ 1.4
SHCBP1-203ENST00000564272 FLOT1O75955 427 aa23.82■■□□□ 1.4
SHCBP1-203ENST00000564272 SAMD1Q6SPF0 538 aaPredicted RBP23.82■■□□□ 1.4
SHCBP1-203ENST00000564272 USP6NLQ92738 828 aa23.82■■□□□ 1.4
SHCBP1-203ENST00000564272 FAM227BQ96M60 508 aa23.82■■□□□ 1.4
SHCBP1-203ENST00000564272 A0A0D9SFI3 127 aa23.81■■□□□ 1.4
SHCBP1-203ENST00000564272 RAD21O60216 631 aa23.81■■□□□ 1.4
SHCBP1-203ENST00000564272 DSG3P32926 999 aa23.81■■□□□ 1.4
SHCBP1-203ENST00000564272 PPARAQ07869 468 aa23.81■■□□□ 1.4
SHCBP1-203ENST00000564272 VPS53Q5VIR6 699 aa23.81■■□□□ 1.4
SHCBP1-203ENST00000564272 PLEKHM2Q8IWE5 1019 aa23.81■■□□□ 1.4
SHCBP1-203ENST00000564272 ATG4CQ96DT6 458 aa23.81■■□□□ 1.4
SHCBP1-203ENST00000564272 DEFB118Q96PH6 123 aa23.81■■□□□ 1.4
SHCBP1-203ENST00000564272 GOPCQ9HD26 462 aa23.81■■□□□ 1.4
SHCBP1-203ENST00000564272 PAK6Q9NQU5 681 aaPredicted RBP23.81■■□□□ 1.4
SHCBP1-203ENST00000564272 HOXC10Q9NYD6 342 aa23.81■■□□□ 1.4
SHCBP1-203ENST00000564272 IGKV6D-41A0A0C4DH26 115 aa23.8■■□□□ 1.4
SHCBP1-203ENST00000564272 TRIM6-TRIM34B2RNG4 842 aa23.8■■□□□ 1.4
SHCBP1-203ENST00000564272 RGS2P41220 211 aa23.8■■□□□ 1.4
SHCBP1-203ENST00000564272 APBA2Q99767 749 aa23.8■■□□□ 1.4
SHCBP1-203ENST00000564272 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.8■■□□□ 1.4
SHCBP1-203ENST00000564272 ZNF287Q9HBT7 754 aa23.8■■□□□ 1.4
SHCBP1-203ENST00000564272 HELLSQ9NRZ9 838 aa23.8■■□□□ 1.4
SHCBP1-203ENST00000564272 SGPL1O95470 568 aa23.79■■□□□ 1.4
SHCBP1-203ENST00000564272 XRCC5P13010 732 aaKnown RBP23.79■■□□□ 1.4
SHCBP1-203ENST00000564272 ZKSCAN1P17029 563 aaPredicted RBP23.79■■□□□ 1.4
SHCBP1-203ENST00000564272 CCL14Q16627 93 aa23.79■■□□□ 1.4
SHCBP1-203ENST00000564272 FAM83BQ5T0W9 1011 aa23.79■■□□□ 1.4
SHCBP1-203ENST00000564272 ZNF444Q8N0Y2 327 aaPredicted RBP23.79■■□□□ 1.4
SHCBP1-203ENST00000564272 RILPL2Q969X0 211 aa23.79■■□□□ 1.4
SHCBP1-203ENST00000564272 MOV10L1Q9BXT6 1211 aaKnown RBP23.79■■□□□ 1.4
SHCBP1-203ENST00000564272 FBXO28Q9NVF7 368 aa23.79■■□□□ 1.4
SHCBP1-203ENST00000564272 NYAP2Q9P242 653 aa23.79■■□□□ 1.4
SHCBP1-203ENST00000564272 MYH4Q9Y623 1939 aa23.78■■□□□ 1.4
SHCBP1-203ENST00000564272 MAP2K5Q13163 448 aa23.78■■□□□ 1.4
SHCBP1-203ENST00000564272 NMIQ13287 307 aaPredicted RBP23.78■■□□□ 1.4
SHCBP1-203ENST00000564272 SPATC1LQ9H0A9 340 aa23.78■■□□□ 1.4
SHCBP1-203ENST00000564272 PLIN4Q96Q06 1357 aa23.78■■□□□ 1.4
SHCBP1-203ENST00000564272 COL11A1P12107 1806 aaPredicted RBP23.77■■□□□ 1.4
SHCBP1-203ENST00000564272 SLC15A5A6NIM6 579 aa23.77■■□□□ 1.4
SHCBP1-203ENST00000564272 SLC3A2P08195 630 aaKnown RBP23.77■■□□□ 1.4
SHCBP1-203ENST00000564272 PRKAR2AP13861 404 aaKnown RBP23.77■■□□□ 1.4
SHCBP1-203ENST00000564272 PTPREP23469 700 aa23.77■■□□□ 1.4
SHCBP1-203ENST00000564272 CTDSPL2Q05D32 466 aa23.77■■□□□ 1.4
SHCBP1-203ENST00000564272 PDE4BQ07343 736 aa23.77■■□□□ 1.4
SHCBP1-203ENST00000564272 FAM47AQ5JRC9 791 aa23.77■■□□□ 1.4
SHCBP1-203ENST00000564272 UBE2Q1Q7Z7E8 422 aa23.77■■□□□ 1.4
SHCBP1-203ENST00000564272 MB21D1Q8N884 522 aa23.77■■□□□ 1.4
SHCBP1-203ENST00000564272 CEP95Q96GE4 821 aa23.77■■□□□ 1.4
SHCBP1-203ENST00000564272 NUP88Q99567 741 aaPredicted RBP23.77■■□□□ 1.4
SHCBP1-203ENST00000564272 OSBPL3Q9H4L5 887 aa23.77■■□□□ 1.4
SHCBP1-203ENST00000564272 CLIP2Q9UDT6 1046 aa23.77■■□□□ 1.4
SHCBP1-203ENST00000564272 IVNS1ABPQ9Y6Y0 642 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms