RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 POLR3EQ9NVU0 708 aa11.02□□□□□ -0.65
CDH13-205ENST00000562307 TMOD2Q9NZR1 351 aa11.02□□□□□ -0.65
CDH13-205ENST00000562307 TTLL1O95922 423 aa11.01□□□□□ -0.65
CDH13-205ENST00000562307 DEKP35659 375 aaKnown RBP11.01□□□□□ -0.65
CDH13-205ENST00000562307 PFKFB3Q16875 520 aaPredicted RBP11.01□□□□□ -0.65
CDH13-205ENST00000562307 SLC35G1Q2M3R5 365 aa11.01□□□□□ -0.65
CDH13-205ENST00000562307 NOSTRINQ8IVI9 506 aa11.01□□□□□ -0.65
CDH13-205ENST00000562307 STAG2Q8N3U4 1231 aa11.01□□□□□ -0.65
CDH13-205ENST00000562307 LINC00301Q8NCQ3 95 aa11.01□□□□□ -0.65
CDH13-205ENST00000562307 SYAP1Q96A49 352 aaPredicted RBP11.01□□□□□ -0.65
CDH13-205ENST00000562307 SPZ1Q9BXG8 430 aa11.01□□□□□ -0.65
CDH13-205ENST00000562307 SH3GLB2Q9NR46 395 aa11.01□□□□□ -0.65
CDH13-205ENST00000562307 NYAP2Q9P242 653 aa11.01□□□□□ -0.65
CDH13-205ENST00000562307 HERC5Q9UII4 1024 aaKnown RBP11.01□□□□□ -0.65
CDH13-205ENST00000562307 TCHHQ07283 1943 aa11.01□□□□□ -0.65
CDH13-205ENST00000562307 CNTNAP1P78357 1384 aa11.01□□□□□ -0.65
CDH13-205ENST00000562307 SIPA1L1O43166 1804 aa11□□□□□ -0.65
CDH13-205ENST00000562307 ARFGEF1Q9Y6D6 1849 aa11□□□□□ -0.65
CDH13-205ENST00000562307 GREB1LQ9C091 1923 aaPredicted RBP11□□□□□ -0.65
CDH13-205ENST00000562307 BTBD18B2RXH4 712 aa11□□□□□ -0.65
CDH13-205ENST00000562307 TBC1D12O60347 775 aa11□□□□□ -0.65
CDH13-205ENST00000562307 PARP1P09874 1014 aaKnown RBP11□□□□□ -0.65
CDH13-205ENST00000562307 SCG2P13521 617 aa11□□□□□ -0.65
CDH13-205ENST00000562307 MAP3K10Q02779 954 aa11□□□□□ -0.65
CDH13-205ENST00000562307 RASSF7Q02833 373 aa11□□□□□ -0.65
CDH13-205ENST00000562307 NPY5RQ15761 445 aa11□□□□□ -0.65
CDH13-205ENST00000562307 CERKLQ49MI3 558 aaPredicted RBP11□□□□□ -0.65
CDH13-205ENST00000562307 ZSCAN29Q8IWY8 852 aaPredicted RBP11□□□□□ -0.65
CDH13-205ENST00000562307 DIS3L2Q8IYB7 885 aaKnown RBP11□□□□□ -0.65
CDH13-205ENST00000562307 KANSL2Q9H9L4 492 aa11□□□□□ -0.65
CDH13-205ENST00000562307 MYOZ2Q9NPC6 264 aa11□□□□□ -0.65
CDH13-205ENST00000562307 CLIP2Q9UDT6 1046 aa11□□□□□ -0.65
CDH13-205ENST00000562307 PGAP2Q9UHJ9 254 aa11□□□□□ -0.65
CDH13-205ENST00000562307 KCNJ14Q9UNX9 436 aa11□□□□□ -0.65
CDH13-205ENST00000562307 TCP10L2B9ZVM9 353 aa10.99□□□□□ -0.65
CDH13-205ENST00000562307 KLRF2D3W0D1 207 aa10.99□□□□□ -0.65
CDH13-205ENST00000562307 WNT10BO00744 389 aa10.99□□□□□ -0.65
CDH13-205ENST00000562307 CYTH3O43739 400 aa10.99□□□□□ -0.65
CDH13-205ENST00000562307 LETM1O95202 739 aaPredicted RBP10.99□□□□□ -0.65
CDH13-205ENST00000562307 SLURP2P0DP57 97 aa10.99□□□□□ -0.65
CDH13-205ENST00000562307 PDHBP11177 359 aa10.99□□□□□ -0.65
CDH13-205ENST00000562307 EIF6P56537 245 aaKnown RBP10.99□□□□□ -0.65
CDH13-205ENST00000562307 SLC39A14Q15043 492 aa10.99□□□□□ -0.65
CDH13-205ENST00000562307 ASPRV1Q53RT3 343 aa10.99□□□□□ -0.65
CDH13-205ENST00000562307 CCDC183Q5T5S1 534 aa10.99□□□□□ -0.65
CDH13-205ENST00000562307 ANO1Q5XXA6 986 aa10.99□□□□□ -0.65
CDH13-205ENST00000562307 TMEM179Q6ZVK1 233 aa10.99□□□□□ -0.65
CDH13-205ENST00000562307 SIAH1Q8IUQ4 282 aa10.99□□□□□ -0.65
CDH13-205ENST00000562307 KCNG4Q8TDN1 519 aa10.99□□□□□ -0.65
CDH13-205ENST00000562307 TNFRSF25Q93038 417 aa10.99□□□□□ -0.65
CDH13-205ENST00000562307 FTOQ9C0B1 505 aaKnown RBP eCLIP10.99□□□□□ -0.65
CDH13-205ENST00000562307 RIOX1Q9H6W3 641 aa10.99□□□□□ -0.65
CDH13-205ENST00000562307 VPS54Q9P1Q0 977 aa10.99□□□□□ -0.65
CDH13-205ENST00000562307 SYNPO2Q9UMS6 1093 aa10.99□□□□□ -0.65
CDH13-205ENST00000562307 CLIC4Q9Y696 253 aa10.99□□□□□ -0.65
CDH13-205ENST00000562307 MORC2Q9Y6X9 1032 aaPredicted RBP10.99□□□□□ -0.65
CDH13-205ENST00000562307 MYH15Q9Y2K3 1946 aa10.98□□□□□ -0.65
CDH13-205ENST00000562307 A0A1W2PQ27 194 aa10.98□□□□□ -0.65
CDH13-205ENST00000562307 A0A1W2PQ64 194 aa10.98□□□□□ -0.65
CDH13-205ENST00000562307 A0A1W2PQD8 194 aa10.98□□□□□ -0.65
CDH13-205ENST00000562307 hCG_1642624A0A1W2PR95 340 aa10.98□□□□□ -0.65
CDH13-205ENST00000562307 CLRN2A0PK11 232 aa10.98□□□□□ -0.65
CDH13-205ENST00000562307 GOLGA6L4A6NEF3 574 aa10.98□□□□□ -0.65
CDH13-205ENST00000562307 GOLGA6L3A6NEY3 463 aa10.98□□□□□ -0.65
CDH13-205ENST00000562307 USP17L5A8MUK1 530 aa10.98□□□□□ -0.65
CDH13-205ENST00000562307 MYO1BO43795 1136 aa10.98□□□□□ -0.65
CDH13-205ENST00000562307 KRT2P35908 639 aa10.98□□□□□ -0.65
CDH13-205ENST00000562307 CEBPZQ03701 1054 aaKnown RBP10.98□□□□□ -0.65
CDH13-205ENST00000562307 ZNF543Q08ER8 600 aa10.98□□□□□ -0.65
CDH13-205ENST00000562307 GNL2Q13823 731 aaKnown RBP10.98□□□□□ -0.65
CDH13-205ENST00000562307 PTPAQ15257 358 aa10.98□□□□□ -0.65
CDH13-205ENST00000562307 RILPL1Q5EBL4 403 aa10.98□□□□□ -0.65
CDH13-205ENST00000562307 ADALQ6DHV7 355 aa10.98□□□□□ -0.65
CDH13-205ENST00000562307 GALNT17Q6IS24 598 aa10.98□□□□□ -0.65
CDH13-205ENST00000562307 USP17L2Q6R6M4 530 aa10.98□□□□□ -0.65
CDH13-205ENST00000562307 GAS2L3Q86XJ1 694 aa10.98□□□□□ -0.65
CDH13-205ENST00000562307 OXER1Q8TDS5 423 aa10.98□□□□□ -0.65
CDH13-205ENST00000562307 CSRNP1Q96S65 589 aa10.98□□□□□ -0.65
CDH13-205ENST00000562307 TRIM34Q9BYJ4 488 aa10.98□□□□□ -0.65
CDH13-205ENST00000562307 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.98□□□□□ -0.65
CDH13-205ENST00000562307 FAM196BA6NMK8 535 aa10.97□□□□□ -0.65
CDH13-205ENST00000562307 MPHOSPH10O00566 681 aaKnown RBP10.97□□□□□ -0.65
CDH13-205ENST00000562307 SPTLC2O15270 562 aa10.97□□□□□ -0.65
CDH13-205ENST00000562307 PPP6R2O75170 966 aa10.97□□□□□ -0.65
CDH13-205ENST00000562307 GOLGA8HP0CJ92 632 aa10.97□□□□□ -0.65
CDH13-205ENST00000562307 EEF2P13639 858 aaKnown RBP10.97□□□□□ -0.65
CDH13-205ENST00000562307 VEGFAP15692 232 aaPredicted RBP10.97□□□□□ -0.65
CDH13-205ENST00000562307 LIG1P18858 919 aa10.97□□□□□ -0.65
CDH13-205ENST00000562307 CALML3P27482 149 aa10.97□□□□□ -0.65
CDH13-205ENST00000562307 GMPSP49915 693 aaPredicted RBP10.97□□□□□ -0.65
CDH13-205ENST00000562307 TOB1P50616 345 aaPredicted RBP10.97□□□□□ -0.65
CDH13-205ENST00000562307 NR5A1Q13285 461 aa10.97□□□□□ -0.65
CDH13-205ENST00000562307 RRP1BQ14684 758 aaKnown RBP10.97□□□□□ -0.65
CDH13-205ENST00000562307 STK38Q15208 465 aa10.97□□□□□ -0.65
CDH13-205ENST00000562307 ABCB5Q2M3G0 1257 aa10.97□□□□□ -0.65
CDH13-205ENST00000562307 NBPF9Q3BBW0 867 aa10.97□□□□□ -0.65
CDH13-205ENST00000562307 GPATCH4Q5T3I0 446 aaKnown RBP10.97□□□□□ -0.65
CDH13-205ENST00000562307 L1TD1Q5T7N2 865 aaKnown RBP10.97□□□□□ -0.65
CDH13-205ENST00000562307 LRSAM1Q6UWE0 723 aa10.97□□□□□ -0.65
CDH13-205ENST00000562307 FHDC1Q9C0D6 1143 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms