RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 SPDYE16A6NNV3 312 aaPredicted RBP11.32□□□□□ -0.6
NSMCE1-203ENST00000562039 PATL2C9JE40 543 aaKnown RBP11.32□□□□□ -0.6
NSMCE1-203ENST00000562039 UBXN2AP68543 259 aa11.32□□□□□ -0.6
NSMCE1-203ENST00000562039 PLS1Q14651 629 aa11.32□□□□□ -0.6
NSMCE1-203ENST00000562039 FAM47AQ5JRC9 791 aa11.32□□□□□ -0.6
NSMCE1-203ENST00000562039 CHD1LQ86WJ1 897 aa11.32□□□□□ -0.6
NSMCE1-203ENST00000562039 SMC5Q8IY18 1101 aa11.32□□□□□ -0.6
NSMCE1-203ENST00000562039 SLAIN1Q8ND83 568 aa11.32□□□□□ -0.6
NSMCE1-203ENST00000562039 EVI5LQ96CN4 794 aa11.32□□□□□ -0.6
NSMCE1-203ENST00000562039 SHISA4Q96DD7 197 aa11.32□□□□□ -0.6
NSMCE1-203ENST00000562039 CCDC17Q96LX7 622 aa11.32□□□□□ -0.6
NSMCE1-203ENST00000562039 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.32□□□□□ -0.6
NSMCE1-203ENST00000562039 NAPBQ9H115 298 aa11.32□□□□□ -0.6
NSMCE1-203ENST00000562039 ARHGEF10LQ9HCE6 1279 aa11.32□□□□□ -0.6
NSMCE1-203ENST00000562039 FBXO28Q9NVF7 368 aa11.32□□□□□ -0.6
NSMCE1-203ENST00000562039 STAP2Q9UGK3 403 aa11.32□□□□□ -0.6
NSMCE1-203ENST00000562039 GJD2Q9UKL4 321 aa11.32□□□□□ -0.6
NSMCE1-203ENST00000562039 A0A0D9SFI3 127 aa11.31□□□□□ -0.6
NSMCE1-203ENST00000562039 FOXP2O15409 715 aa11.31□□□□□ -0.6
NSMCE1-203ENST00000562039 FLOT1O75955 427 aa11.31□□□□□ -0.6
NSMCE1-203ENST00000562039 SLC4A3P48751 1232 aa11.31□□□□□ -0.6
NSMCE1-203ENST00000562039 NMIQ13287 307 aaPredicted RBP11.31□□□□□ -0.6
NSMCE1-203ENST00000562039 CCL14Q16627 93 aa11.31□□□□□ -0.6
NSMCE1-203ENST00000562039 LRRFIP1Q32MZ4 808 aaKnown RBP11.31□□□□□ -0.6
NSMCE1-203ENST00000562039 SBK1Q52WX2 424 aa11.31□□□□□ -0.6
NSMCE1-203ENST00000562039 GPR142Q7Z601 462 aa11.31□□□□□ -0.6
NSMCE1-203ENST00000562039 PLEKHM2Q8IWE5 1019 aa11.31□□□□□ -0.6
NSMCE1-203ENST00000562039 ZNF444Q8N0Y2 327 aaPredicted RBP11.31□□□□□ -0.6
NSMCE1-203ENST00000562039 ATG4CQ96DT6 458 aa11.31□□□□□ -0.6
NSMCE1-203ENST00000562039 DEFB118Q96PH6 123 aa11.31□□□□□ -0.6
NSMCE1-203ENST00000562039 VCPKMTQ9H867 229 aa11.31□□□□□ -0.6
NSMCE1-203ENST00000562039 MTMR7Q9Y216 660 aa11.31□□□□□ -0.6
NSMCE1-203ENST00000562039 TMX2Q9Y320 296 aa11.31□□□□□ -0.6
NSMCE1-203ENST00000562039 BRCA2P51587 3418 aa11.31□□□□□ -0.6
NSMCE1-203ENST00000562039 GNAT2P19087 354 aa11.3□□□□□ -0.6
NSMCE1-203ENST00000562039 NUCB1Q02818 461 aa11.3□□□□□ -0.6
NSMCE1-203ENST00000562039 PPARAQ07869 468 aa11.3□□□□□ -0.6
NSMCE1-203ENST00000562039 IRF5Q13568 498 aa11.3□□□□□ -0.6
NSMCE1-203ENST00000562039 FAM83BQ5T0W9 1011 aa11.3□□□□□ -0.6
NSMCE1-203ENST00000562039 PLEKHH3Q7Z736 793 aa11.3□□□□□ -0.6
NSMCE1-203ENST00000562039 ZNF589Q86UQ0 364 aaPredicted RBP11.3□□□□□ -0.6
NSMCE1-203ENST00000562039 LRRC47Q8N1G4 583 aaKnown RBP11.3□□□□□ -0.6
NSMCE1-203ENST00000562039 TRIB2Q92519 343 aa11.3□□□□□ -0.6
NSMCE1-203ENST00000562039 NUDT12Q9BQG2 462 aa11.3□□□□□ -0.6
NSMCE1-203ENST00000562039 NACAP1Q9BZK3 213 aa11.3□□□□□ -0.6
NSMCE1-203ENST00000562039 CLIP2Q9UDT6 1046 aa11.3□□□□□ -0.6
NSMCE1-203ENST00000562039 ISY1Q9ULR0 285 aaKnown RBP11.3□□□□□ -0.6
NSMCE1-203ENST00000562039 RABGAP1Q9Y3P9 1069 aa11.3□□□□□ -0.6
NSMCE1-203ENST00000562039 TACC3Q9Y6A5 838 aa11.3□□□□□ -0.6
NSMCE1-203ENST00000562039 TNRC18O15417 2968 aaPredicted RBP11.3□□□□□ -0.6
NSMCE1-203ENST00000562039 PLXNB2O15031 1838 aa11.3□□□□□ -0.6
NSMCE1-203ENST00000562039 TFRCP02786 760 aaKnown RBP11.29□□□□□ -0.6
NSMCE1-203ENST00000562039 PDE4AP27815 886 aa11.29□□□□□ -0.6
NSMCE1-203ENST00000562039 DSG3P32926 999 aa11.29□□□□□ -0.6
NSMCE1-203ENST00000562039 HAND2P61296 217 aa11.29□□□□□ -0.6
NSMCE1-203ENST00000562039 COG2Q14746 738 aa11.29□□□□□ -0.6
NSMCE1-203ENST00000562039 GIMAP6Q6P9H5 292 aa11.29□□□□□ -0.6
NSMCE1-203ENST00000562039 U2AF1L4Q8WU68 220 aaKnown RBP11.29□□□□□ -0.6
NSMCE1-203ENST00000562039 KANSL2Q9H9L4 492 aa11.29□□□□□ -0.6
NSMCE1-203ENST00000562039 TOMM22Q9NS69 142 aa11.29□□□□□ -0.6
NSMCE1-203ENST00000562039 GJB1P08034 283 aa11.28□□□□□ -0.6
NSMCE1-203ENST00000562039 TSPY3P0CV98 308 aa11.28□□□□□ -0.6
NSMCE1-203ENST00000562039 TSPY8P0CW00 308 aa11.28□□□□□ -0.6
NSMCE1-203ENST00000562039 MAPK4P31152 587 aa11.28□□□□□ -0.6
NSMCE1-203ENST00000562039 TFAP4Q01664 338 aa11.28□□□□□ -0.6
NSMCE1-203ENST00000562039 RRP12Q5JTH9 1297 aaKnown RBP11.28□□□□□ -0.6
NSMCE1-203ENST00000562039 NCAPG2Q86XI2 1143 aa11.28□□□□□ -0.6
NSMCE1-203ENST00000562039 PXYLP1Q8TE99 480 aa11.28□□□□□ -0.6
NSMCE1-203ENST00000562039 CEP95Q96GE4 821 aa11.28□□□□□ -0.6
NSMCE1-203ENST00000562039 MOV10L1Q9BXT6 1211 aaKnown RBP11.28□□□□□ -0.6
NSMCE1-203ENST00000562039 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.28□□□□□ -0.6
NSMCE1-203ENST00000562039 SH2D4AQ9H788 454 aa11.28□□□□□ -0.6
NSMCE1-203ENST00000562039 GOPCQ9HD26 462 aa11.28□□□□□ -0.6
NSMCE1-203ENST00000562039 FLRT1Q9NZU1 646 aa11.28□□□□□ -0.6
NSMCE1-203ENST00000562039 RBBP6Q7Z6E9 1792 aaKnown RBP11.28□□□□□ -0.6
NSMCE1-203ENST00000562039 ROBO3Q96MS0 1386 aa11.28□□□□□ -0.6
NSMCE1-203ENST00000562039 F5H6K3 240 aa11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 WDR46O15213 610 aaKnown RBP11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 RANBP6O60518 1105 aaKnown RBP11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 NMT2O60551 498 aa11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 NDUFB10O96000 172 aa11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 HMGCRP04035 888 aa11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 PRKAR2AP13861 404 aaKnown RBP11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 ZKSCAN1P17029 563 aaPredicted RBP11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 ERCC3P19447 782 aa11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 PTPREP23469 700 aa11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 CCND3P30281 292 aaPredicted RBP11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 GJA8P48165 433 aa11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 CCNA1P78396 465 aa11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 KLRC3Q07444 240 aa11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 AAMPQ13685 434 aa11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 MCMDC2Q4G0Z9 681 aa11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 MORN1Q5T089 497 aa11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 CWC27Q6UX04 472 aaKnown RBP11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 LBX2Q6XYB7 198 aa11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 RASGRP2Q7LDG7 609 aa11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 NPLOC4Q8TAT6 608 aa11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 GTF3C2Q8WUA4 911 aaPredicted RBP11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 SOCS4Q8WXH5 440 aa11.27□□□□□ -0.61
NSMCE1-203ENST00000562039 SPATC1LQ9H0A9 340 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms