RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 SDR42E1Q8WUS8 393 aa17.6■□□□□ 0.41
SPG7-205ENST00000561945 ATP8A2Q9NTI2 1148 aa17.6■□□□□ 0.41
SPG7-205ENST00000561945 HOXC10Q9NYD6 342 aa17.6■□□□□ 0.41
SPG7-205ENST00000561945 GREB1LQ9C091 1923 aaPredicted RBP17.59■□□□□ 0.41
SPG7-205ENST00000561945 LPAR1Q92633 364 aa17.59■□□□□ 0.41
SPG7-205ENST00000561945 DNAJC2Q99543 621 aaKnown RBP17.59■□□□□ 0.41
SPG7-205ENST00000561945 HAUS7Q99871 368 aa17.59■□□□□ 0.41
SPG7-205ENST00000561945 CHMP4BQ9H444 224 aaKnown RBP17.59■□□□□ 0.41
SPG7-205ENST00000561945 PAG1Q9NWQ8 432 aa17.59■□□□□ 0.41
SPG7-205ENST00000561945 COG6Q9Y2V7 657 aa17.59■□□□□ 0.41
SPG7-205ENST00000561945 STRNO43815 780 aa17.58■□□□□ 0.4
SPG7-205ENST00000561945 MSCO60682 206 aa17.58■□□□□ 0.4
SPG7-205ENST00000561945 UBE3CQ15386 1083 aa17.58■□□□□ 0.4
SPG7-205ENST00000561945 LRIT3Q3SXY7 679 aa17.58■□□□□ 0.4
SPG7-205ENST00000561945 MFSD14CQ5VZR4 134 aa17.58■□□□□ 0.4
SPG7-205ENST00000561945 MB21D1Q8N884 522 aa17.58■□□□□ 0.4
SPG7-205ENST00000561945 NPLOC4Q8TAT6 608 aa17.58■□□□□ 0.4
SPG7-205ENST00000561945 TMX2Q9Y320 296 aa17.58■□□□□ 0.4
SPG7-205ENST00000561945 CYP2D6P10635 497 aa17.57■□□□□ 0.4
SPG7-205ENST00000561945 KIAA1755Q5JYT7 1200 aa17.57■□□□□ 0.4
SPG7-205ENST00000561945 C12orf60Q5U649 245 aa17.57■□□□□ 0.4
SPG7-205ENST00000561945 OLFML2BQ68BL8 750 aa17.57■□□□□ 0.4
SPG7-205ENST00000561945 CCDC17Q96LX7 622 aa17.57■□□□□ 0.4
SPG7-205ENST00000561945 MOV10L1Q9BXT6 1211 aaKnown RBP17.57■□□□□ 0.4
SPG7-205ENST00000561945 ARMT1Q9H993 441 aa17.57■□□□□ 0.4
SPG7-205ENST00000561945 DDX20Q9UHI6 824 aaKnown RBP17.57■□□□□ 0.4
SPG7-205ENST00000561945 ZMYND8Q9ULU4 1186 aaPredicted RBP17.57■□□□□ 0.4
SPG7-205ENST00000561945 IVNS1ABPQ9Y6Y0 642 aa17.57■□□□□ 0.4
SPG7-205ENST00000561945 CYBAP13498 195 aa17.56■□□□□ 0.4
SPG7-205ENST00000561945 DSG3P32926 999 aa17.56■□□□□ 0.4
SPG7-205ENST00000561945 MAGEA10P43363 369 aaPredicted RBP17.56■□□□□ 0.4
SPG7-205ENST00000561945 LRRC26Q2I0M4 334 aa17.56■□□□□ 0.4
SPG7-205ENST00000561945 ABRAQ8N0Z2 381 aa17.56■□□□□ 0.4
SPG7-205ENST00000561945 SLC44A5Q8NCS7 719 aa17.56■□□□□ 0.4
SPG7-205ENST00000561945 LRCH3Q96II8 777 aa17.56■□□□□ 0.4
SPG7-205ENST00000561945 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.56■□□□□ 0.44e-8■□□□□ 11
SPG7-205ENST00000561945 SPATC1LQ9H0A9 340 aa17.56■□□□□ 0.4
SPG7-205ENST00000561945 CWC22Q9HCG8 908 aaKnown RBP17.56■□□□□ 0.4
SPG7-205ENST00000561945 ADAMTS5Q9UNA0 930 aa17.56■□□□□ 0.4
SPG7-205ENST00000561945 COL11A1P12107 1806 aaPredicted RBP17.56■□□□□ 0.4
SPG7-205ENST00000561945 PRKAB2O43741 272 aa17.55■□□□□ 0.4
SPG7-205ENST00000561945 MBD4O95243 580 aa17.55■□□□□ 0.4
SPG7-205ENST00000561945 AKR1B1P15121 316 aa17.55■□□□□ 0.4
SPG7-205ENST00000561945 SYN1P17600 705 aa17.55■□□□□ 0.4
SPG7-205ENST00000561945 ATP2B2Q01814 1243 aa17.55■□□□□ 0.4
SPG7-205ENST00000561945 C16orf86Q6ZW13 317 aa17.55■□□□□ 0.4
SPG7-205ENST00000561945 TDHQ8IZJ6 230 aa17.55■□□□□ 0.4
SPG7-205ENST00000561945 TRPV1Q8NER1 839 aa17.55■□□□□ 0.4
SPG7-205ENST00000561945 DYNLL2Q96FJ2 89 aa17.55■□□□□ 0.4
SPG7-205ENST00000561945 BOLA2Q9H3K6 86 aa17.55■□□□□ 0.4
SPG7-205ENST00000561945 VCPKMTQ9H867 229 aa17.55■□□□□ 0.4
SPG7-205ENST00000561945 ZNFX1Q9P2E3 1918 aaKnown RBP17.55■□□□□ 0.4
SPG7-205ENST00000561945 LTBP2Q14767 1821 aa17.54■□□□□ 0.4
SPG7-205ENST00000561945 UNC80Q8N2C7 3258 aa17.54■□□□□ 0.4
SPG7-205ENST00000561945 APBB1O00213 710 aa17.54■□□□□ 0.4
SPG7-205ENST00000561945 DNM1LO00429 736 aa17.54■□□□□ 0.4
SPG7-205ENST00000561945 MPHOSPH10O00566 681 aaKnown RBP17.54■□□□□ 0.4
SPG7-205ENST00000561945 ADORA2AP29274 412 aa17.54■□□□□ 0.4
SPG7-205ENST00000561945 CDK8P49336 464 aa17.54■□□□□ 0.4
SPG7-205ENST00000561945 SLFNL1Q499Z3 407 aa17.54■□□□□ 0.4
SPG7-205ENST00000561945 TANGO6Q9C0B7 1094 aa17.54■□□□□ 0.4
SPG7-205ENST00000561945 MROH8Q9H579 483 aa17.54■□□□□ 0.4
SPG7-205ENST00000561945 SH2D4AQ9H788 454 aa17.54■□□□□ 0.4
SPG7-205ENST00000561945 ARHGEF10LQ9HCE6 1279 aa17.54■□□□□ 0.4
SPG7-205ENST00000561945 CUL9Q8IWT3 2517 aa17.53■□□□□ 0.4
SPG7-205ENST00000561945 WDR46O15213 610 aaKnown RBP17.53■□□□□ 0.4
SPG7-205ENST00000561945 ERCC3P19447 782 aa17.53■□□□□ 0.4
SPG7-205ENST00000561945 CYP2C19P33261 490 aa17.53■□□□□ 0.4
SPG7-205ENST00000561945 ICA1Q05084 483 aa17.53■□□□□ 0.4
SPG7-205ENST00000561945 WDR78Q5VTH9 848 aa17.53■□□□□ 0.4
SPG7-205ENST00000561945 EYSQ5T1H1 3165 aa17.52■□□□□ 0.4
SPG7-205ENST00000561945 USP17L12C9JPN9 530 aa17.52■□□□□ 0.4
SPG7-205ENST00000561945 USP17L21D6R901 530 aa17.52■□□□□ 0.4
SPG7-205ENST00000561945 SMIM22K7EJ46 135 aa17.52■□□□□ 0.4
SPG7-205ENST00000561945 COBLO75128 1261 aa17.52■□□□□ 0.4
SPG7-205ENST00000561945 CHGBP05060 677 aa17.52■□□□□ 0.4
SPG7-205ENST00000561945 ZSCAN25Q6NSZ9 544 aa17.52■□□□□ 0.4
SPG7-205ENST00000561945 DPP9Q86TI2 863 aa17.52■□□□□ 0.4
SPG7-205ENST00000561945 LRRCC1Q9C099 1032 aa17.52■□□□□ 0.4
SPG7-205ENST00000561945 RCAN3Q9UKA8 241 aa17.52■□□□□ 0.4
SPG7-205ENST00000561945 FLOT1O75955 427 aa17.51■□□□□ 0.39
SPG7-205ENST00000561945 CTR9Q6PD62 1173 aa17.51■□□□□ 0.39
SPG7-205ENST00000561945 CLEC10AQ8IUN9 316 aa17.51■□□□□ 0.39
SPG7-205ENST00000561945 ATG4CQ96DT6 458 aa17.51■□□□□ 0.39
SPG7-205ENST00000561945 PUS7LQ9H0K6 701 aaKnown RBP17.51■□□□□ 0.39
SPG7-205ENST00000561945 KANSL2Q9H9L4 492 aa17.51■□□□□ 0.39
SPG7-205ENST00000561945 ARPP21Q9UBL0 812 aaPredicted RBP17.51■□□□□ 0.39
SPG7-205ENST00000561945 PLXNA1Q9UIW2 1896 aa17.51■□□□□ 0.39
SPG7-205ENST00000561945 ROBO3Q96MS0 1386 aa17.51■□□□□ 0.39
SPG7-205ENST00000561945 CYP2D7A0A087X1C5 515 aa17.5■□□□□ 0.39
SPG7-205ENST00000561945 SEPT4O43236 478 aa17.5■□□□□ 0.39
SPG7-205ENST00000561945 SLC25A27O95847 323 aa17.5■□□□□ 0.39
SPG7-205ENST00000561945 TMEM132BQ14DG7 1078 aa17.5■□□□□ 0.39
SPG7-205ENST00000561945 SNX17Q15036 470 aa17.5■□□□□ 0.39
SPG7-205ENST00000561945 SBK1Q52WX2 424 aa17.5■□□□□ 0.39
SPG7-205ENST00000561945 GIMAP6Q6P9H5 292 aa17.5■□□□□ 0.39
SPG7-205ENST00000561945 AMOTL1Q8IY63 956 aa17.5■□□□□ 0.39
SPG7-205ENST00000561945 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.5■□□□□ 0.39
SPG7-205ENST00000561945 UBE2OQ9C0C9 1292 aaKnown RBP17.5■□□□□ 0.39
SPG7-205ENST00000561945 SENP6Q9GZR1 1112 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms