RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 Q3C1V9 767 aa28.42■■■□□ 2.14
CDR2-202ENST00000561630 PXYLP1Q8TE99 480 aa28.42■■■□□ 2.14
CDR2-202ENST00000561630 FAM227BQ96M60 508 aa28.42■■■□□ 2.14
CDR2-202ENST00000561630 GJD2Q9UKL4 321 aa28.42■■■□□ 2.14
CDR2-202ENST00000561630 MGAMO43451 1857 aa28.41■■■□□ 2.14
CDR2-202ENST00000561630 SPDYE16A6NNV3 312 aaPredicted RBP28.41■■■□□ 2.14
CDR2-202ENST00000561630 CNMDO75829 334 aa28.41■■■□□ 2.14
CDR2-202ENST00000561630 RILPL2Q969X0 211 aa28.41■■■□□ 2.14
CDR2-202ENST00000561630 A0A0D9SFI3 127 aa28.4■■■□□ 2.14
CDR2-202ENST00000561630 MAPK4P31152 587 aa28.4■■■□□ 2.14
CDR2-202ENST00000561630 ATP2B2Q01814 1243 aa28.4■■■□□ 2.14
CDR2-202ENST00000561630 PPARAQ07869 468 aa28.4■■■□□ 2.14
CDR2-202ENST00000561630 COG2Q14746 738 aa28.4■■■□□ 2.14
CDR2-202ENST00000561630 MCMDC2Q4G0Z9 681 aa28.4■■■□□ 2.14
CDR2-202ENST00000561630 TANGO6Q9C0B7 1094 aa28.4■■■□□ 2.14
CDR2-202ENST00000561630 HOXC10Q9NYD6 342 aa28.4■■■□□ 2.14
CDR2-202ENST00000561630 BIN2Q9UBW5 565 aaPredicted RBP28.4■■■□□ 2.14
CDR2-202ENST00000561630 KIAA0100Q14667 2235 aaKnown RBP28.4■■■□□ 2.14
CDR2-202ENST00000561630 PRDM1O75626 825 aa28.39■■■□□ 2.14
CDR2-202ENST00000561630 MTFR1Q15390 333 aa28.39■■■□□ 2.14
CDR2-202ENST00000561630 VPS53Q5VIR6 699 aa28.39■■■□□ 2.14
CDR2-202ENST00000561630 ZNF444Q8N0Y2 327 aaPredicted RBP28.39■■■□□ 2.14
CDR2-202ENST00000561630 SPICE1Q8N0Z3 855 aa28.39■■■□□ 2.14
CDR2-202ENST00000561630 PORCNQ9H237 461 aa28.39■■■□□ 2.14
CDR2-202ENST00000561630 MKI67P46013 3256 aaKnown RBP28.38■■■□□ 2.13
CDR2-202ENST00000561630 SLC3A2P08195 630 aaKnown RBP28.38■■■□□ 2.13
CDR2-202ENST00000561630 ELNP15502 786 aa28.38■■■□□ 2.13
CDR2-202ENST00000561630 EN2P19622 333 aaPredicted RBP28.38■■■□□ 2.13
CDR2-202ENST00000561630 UBXN2AP68543 259 aa28.38■■■□□ 2.13
CDR2-202ENST00000561630 PDE4BQ07343 736 aa28.38■■■□□ 2.13
CDR2-202ENST00000561630 IGKV6D-41A0A0C4DH26 115 aa28.37■■■□□ 2.13
CDR2-202ENST00000561630 WDR46O15213 610 aaKnown RBP28.37■■■□□ 2.13
CDR2-202ENST00000561630 CCNA1P78396 465 aa28.37■■■□□ 2.13
CDR2-202ENST00000561630 NMIQ13287 307 aaPredicted RBP28.37■■■□□ 2.13
CDR2-202ENST00000561630 ALX1Q15699 326 aa28.37■■■□□ 2.13
CDR2-202ENST00000561630 CCAR1Q8IX12 1150 aaKnown RBP28.37■■■□□ 2.13
CDR2-202ENST00000561630 BTBD7Q9P203 1132 aa28.37■■■□□ 2.13
CDR2-202ENST00000561630 NYAP2Q9P242 653 aa28.37■■■□□ 2.13
CDR2-202ENST00000561630 MYH8P13535 1937 aa28.37■■■□□ 2.13
CDR2-202ENST00000561630 GOPCQ9HD26 462 aa28.36■■■□□ 2.13
CDR2-202ENST00000561630 CCL5P13501 91 aa28.35■■■□□ 2.13
CDR2-202ENST00000561630 SDSP20132 328 aa28.35■■■□□ 2.13
CDR2-202ENST00000561630 GPR142Q7Z601 462 aa28.35■■■□□ 2.13
CDR2-202ENST00000561630 SOCS4Q8WXH5 440 aa28.35■■■□□ 2.13
CDR2-202ENST00000561630 RBBP6Q7Z6E9 1792 aaKnown RBP28.34■■■□□ 2.13
CDR2-202ENST00000561630 FLOT1O75955 427 aa28.34■■■□□ 2.13
CDR2-202ENST00000561630 INHAP05111 366 aa28.34■■■□□ 2.13
CDR2-202ENST00000561630 PDE4AP27815 886 aa28.34■■■□□ 2.13
CDR2-202ENST00000561630 DSG3P32926 999 aa28.34■■■□□ 2.13
CDR2-202ENST00000561630 PLEKHH3Q7Z736 793 aa28.34■■■□□ 2.13
CDR2-202ENST00000561630 ZNF589Q86UQ0 364 aaPredicted RBP28.34■■■□□ 2.13
CDR2-202ENST00000561630 NUDT12Q9BQG2 462 aa28.34■■■□□ 2.13
CDR2-202ENST00000561630 ANAPC4Q9UJX5 808 aa28.34■■■□□ 2.13
CDR2-202ENST00000561630 MB21D1Q8N884 522 aa28.33■■■□□ 2.13
CDR2-202ENST00000561630 RNF208Q9H0X6 261 aa28.33■■■□□ 2.13
CDR2-202ENST00000561630 MTMR4Q9NYA4 1195 aa28.33■■■□□ 2.13
CDR2-202ENST00000561630 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.33■■■□□ 2.13
CDR2-202ENST00000561630 PLIN4Q96Q06 1357 aa28.33■■■□□ 2.13
CDR2-202ENST00000561630 GREB1LQ9C091 1923 aaPredicted RBP28.33■■■□□ 2.13
CDR2-202ENST00000561630 FGAP02671 866 aa28.32■■■□□ 2.12
CDR2-202ENST00000561630 TSPY3P0CV98 308 aa28.32■■■□□ 2.12
CDR2-202ENST00000561630 TSPY8P0CW00 308 aa28.32■■■□□ 2.12
CDR2-202ENST00000561630 HSPD1P10809 573 aaKnown RBP28.32■■■□□ 2.12
CDR2-202ENST00000561630 MORN1Q5T089 497 aa28.32■■■□□ 2.12
CDR2-202ENST00000561630 NEDD1Q8NHV4 660 aa28.32■■■□□ 2.12
CDR2-202ENST00000561630 USP6NLQ92738 828 aa28.32■■■□□ 2.12
CDR2-202ENST00000561630 CEP95Q96GE4 821 aa28.32■■■□□ 2.12
CDR2-202ENST00000561630 CCDC171Q6TFL3 1326 aa28.32■■■□□ 2.12
CDR2-202ENST00000561630 GJB1P08034 283 aa28.31■■■□□ 2.12
CDR2-202ENST00000561630 XRCC5P13010 732 aaKnown RBP28.31■■■□□ 2.12
CDR2-202ENST00000561630 CTDSPL2Q05D32 466 aa28.31■■■□□ 2.12
CDR2-202ENST00000561630 MKL1Q969V6 931 aa28.31■■■□□ 2.12
CDR2-202ENST00000561630 UNC93B1Q9H1C4 597 aa28.31■■■□□ 2.12
CDR2-202ENST00000561630 CLIP2Q9UDT6 1046 aa28.31■■■□□ 2.12
CDR2-202ENST00000561630 SYNPO2Q9UMS6 1093 aa28.31■■■□□ 2.12
CDR2-202ENST00000561630 ZMYM6O95789 1325 aa28.3■■■□□ 2.12
CDR2-202ENST00000561630 F5H6K3 240 aa28.3■■■□□ 2.12
CDR2-202ENST00000561630 RAD21O60216 631 aa28.3■■■□□ 2.12
CDR2-202ENST00000561630 HMGCRP04035 888 aa28.3■■■□□ 2.12
CDR2-202ENST00000561630 CYP2B6P20813 491 aa28.3■■■□□ 2.12
CDR2-202ENST00000561630 MFAP1P55081 439 aaKnown RBP28.3■■■□□ 2.12
CDR2-202ENST00000561630 TFAP4Q01664 338 aa28.3■■■□□ 2.12
CDR2-202ENST00000561630 KLRC3Q07444 240 aa28.3■■■□□ 2.12
CDR2-202ENST00000561630 FAM47AQ5JRC9 791 aa28.3■■■□□ 2.12
CDR2-202ENST00000561630 NKX2-3Q8TAU0 364 aa28.3■■■□□ 2.12
CDR2-202ENST00000561630 ATG4CQ96DT6 458 aa28.3■■■□□ 2.12
CDR2-202ENST00000561630 CWC22Q9HCG8 908 aaKnown RBP28.3■■■□□ 2.12
CDR2-202ENST00000561630 DOCK3Q8IZD9 2030 aa28.3■■■□□ 2.12
CDR2-202ENST00000561630 HIP1O00291 1037 aa28.29■■■□□ 2.12
CDR2-202ENST00000561630 TTLL1O95922 423 aa28.29■■■□□ 2.12
CDR2-202ENST00000561630 FAM83BQ5T0W9 1011 aa28.29■■■□□ 2.12
CDR2-202ENST00000561630 MOV10L1Q9BXT6 1211 aaKnown RBP28.29■■■□□ 2.12
CDR2-202ENST00000561630 SPATC1LQ9H0A9 340 aa28.29■■■□□ 2.12
CDR2-202ENST00000561630 DIAPH3Q9NSV4 1193 aa28.29■■■□□ 2.12
CDR2-202ENST00000561630 ADAMTS5Q9UNA0 930 aa28.29■■■□□ 2.12
CDR2-202ENST00000561630 FGRP09769 529 aa28.28■■■□□ 2.12
CDR2-202ENST00000561630 RGS2P41220 211 aa28.28■■■□□ 2.12
CDR2-202ENST00000561630 GJA8P48165 433 aa28.28■■■□□ 2.12
CDR2-202ENST00000561630 CWC27Q6UX04 472 aaKnown RBP28.28■■■□□ 2.12
CDR2-202ENST00000561630 TRIB2Q92519 343 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms