RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 MKNK2Q9HBH9 465 aa24.66■■□□□ 1.54
TPM1-232ENST00000561425 ZNF287Q9HBT7 754 aa24.66■■□□□ 1.54
TPM1-232ENST00000561425 HOXC10Q9NYD6 342 aa24.66■■□□□ 1.54
TPM1-232ENST00000561425 CENPFP49454 3210 aa24.66■■□□□ 1.54
TPM1-232ENST00000561425 EN2P19622 333 aaPredicted RBP24.65■■□□□ 1.54
TPM1-232ENST00000561425 MAPK4P31152 587 aa24.65■■□□□ 1.54
TPM1-232ENST00000561425 MCMDC2Q4G0Z9 681 aa24.65■■□□□ 1.54
TPM1-232ENST00000561425 USP6NLQ92738 828 aa24.65■■□□□ 1.54
TPM1-232ENST00000561425 FAM227BQ96M60 508 aa24.65■■□□□ 1.54
TPM1-232ENST00000561425 NAPBQ9H115 298 aa24.65■■□□□ 1.54
TPM1-232ENST00000561425 PORCNQ9H237 461 aa24.65■■□□□ 1.54
TPM1-232ENST00000561425 NYAP2Q9P242 653 aa24.65■■□□□ 1.54
TPM1-232ENST00000561425 GREB1LQ9C091 1923 aaPredicted RBP24.65■■□□□ 1.54
TPM1-232ENST00000561425 A0A0D9SFI3 127 aa24.64■■□□□ 1.54
TPM1-232ENST00000561425 PPARAQ07869 468 aa24.64■■□□□ 1.54
TPM1-232ENST00000561425 VPS53Q5VIR6 699 aa24.64■■□□□ 1.54
TPM1-232ENST00000561425 BTBD7Q9P203 1132 aa24.64■■□□□ 1.54
TPM1-232ENST00000561425 ANAPC4Q9UJX5 808 aa24.64■■□□□ 1.54
TPM1-232ENST00000561425 WDR46O15213 610 aaKnown RBP24.63■■□□□ 1.53
TPM1-232ENST00000561425 IRX6P78412 446 aaPredicted RBP24.63■■□□□ 1.53
TPM1-232ENST00000561425 ZNF444Q8N0Y2 327 aaPredicted RBP24.63■■□□□ 1.53
TPM1-232ENST00000561425 MKL1Q969V6 931 aa24.63■■□□□ 1.53
TPM1-232ENST00000561425 ADAMTS5Q9UNA0 930 aa24.63■■□□□ 1.53
TPM1-232ENST00000561425 DOCK3Q8IZD9 2030 aa24.62■■□□□ 1.53
TPM1-232ENST00000561425 TRIM6-TRIM34B2RNG4 842 aa24.62■■□□□ 1.53
TPM1-232ENST00000561425 FGRP09769 529 aa24.62■■□□□ 1.53
TPM1-232ENST00000561425 XRCC5P13010 732 aaKnown RBP24.62■■□□□ 1.53
TPM1-232ENST00000561425 ELNP15502 786 aa24.62■■□□□ 1.53
TPM1-232ENST00000561425 SDSP20132 328 aa24.62■■□□□ 1.53
TPM1-232ENST00000561425 DSG3P32926 999 aa24.62■■□□□ 1.53
TPM1-232ENST00000561425 UBXN2AP68543 259 aa24.62■■□□□ 1.53
TPM1-232ENST00000561425 MORN1Q5T089 497 aa24.62■■□□□ 1.53
TPM1-232ENST00000561425 STK11IPQ8N1F8 1099 aa24.62■■□□□ 1.53
TPM1-232ENST00000561425 PAGR1Q9BTK6 254 aa24.62■■□□□ 1.53
TPM1-232ENST00000561425 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.62■■□□□ 1.53
TPM1-232ENST00000561425 MYH8P13535 1937 aa24.62■■□□□ 1.53
TPM1-232ENST00000561425 KIAA0100Q14667 2235 aaKnown RBP24.61■■□□□ 1.53
TPM1-232ENST00000561425 PDE4AP27815 886 aa24.61■■□□□ 1.53
TPM1-232ENST00000561425 PDE4BQ07343 736 aa24.61■■□□□ 1.53
TPM1-232ENST00000561425 NMIQ13287 307 aaPredicted RBP24.61■■□□□ 1.53
TPM1-232ENST00000561425 GPR142Q7Z601 462 aa24.61■■□□□ 1.53
TPM1-232ENST00000561425 NEDD1Q8NHV4 660 aa24.61■■□□□ 1.53
TPM1-232ENST00000561425 SYNPO2Q9UMS6 1093 aa24.61■■□□□ 1.53
TPM1-232ENST00000561425 PLIN4Q96Q06 1357 aa24.61■■□□□ 1.53
TPM1-232ENST00000561425 PRDM1O75626 825 aa24.6■■□□□ 1.53
TPM1-232ENST00000561425 GJB1P08034 283 aa24.6■■□□□ 1.53
TPM1-232ENST00000561425 SLC3A2P08195 630 aaKnown RBP24.6■■□□□ 1.53
TPM1-232ENST00000561425 CCL5P13501 91 aa24.6■■□□□ 1.53
TPM1-232ENST00000561425 CCNA1P78396 465 aa24.6■■□□□ 1.53
TPM1-232ENST00000561425 PLEKHH3Q7Z736 793 aa24.6■■□□□ 1.53
TPM1-232ENST00000561425 ZNF589Q86UQ0 364 aaPredicted RBP24.6■■□□□ 1.53
TPM1-232ENST00000561425 SPICE1Q8N0Z3 855 aa24.6■■□□□ 1.53
TPM1-232ENST00000561425 SOCS4Q8WXH5 440 aa24.6■■□□□ 1.53
TPM1-232ENST00000561425 RILPL2Q969X0 211 aa24.6■■□□□ 1.53
TPM1-232ENST00000561425 NUDT12Q9BQG2 462 aa24.6■■□□□ 1.53
TPM1-232ENST00000561425 MTMR4Q9NYA4 1195 aa24.6■■□□□ 1.53
TPM1-232ENST00000561425 TACC3Q9Y6A5 838 aa24.6■■□□□ 1.53
TPM1-232ENST00000561425 RLFQ13129 1914 aa24.6■■□□□ 1.53
TPM1-232ENST00000561425 PLXNB2O15031 1838 aa24.59■■□□□ 1.53
TPM1-232ENST00000561425 FGAP02671 866 aa24.59■■□□□ 1.53
TPM1-232ENST00000561425 INHAP05111 366 aa24.59■■□□□ 1.53
TPM1-232ENST00000561425 HSPD1P10809 573 aaKnown RBP24.59■■□□□ 1.53
TPM1-232ENST00000561425 MB21D1Q8N884 522 aa24.59■■□□□ 1.53
TPM1-232ENST00000561425 TANGO6Q9C0B7 1094 aa24.59■■□□□ 1.53
TPM1-232ENST00000561425 GOPCQ9HD26 462 aa24.59■■□□□ 1.53
TPM1-232ENST00000561425 ZMYM6O95789 1325 aa24.59■■□□□ 1.53
TPM1-232ENST00000561425 MYCP01106 439 aaPredicted RBP24.58■■□□□ 1.53
TPM1-232ENST00000561425 GJA8P48165 433 aa24.58■■□□□ 1.53
TPM1-232ENST00000561425 UNC93B1Q9H1C4 597 aa24.58■■□□□ 1.53
TPM1-232ENST00000561425 BRCA2P51587 3418 aa24.58■■□□□ 1.52
TPM1-232ENST00000561425 CAPN2P17655 700 aa24.57■■□□□ 1.52
TPM1-232ENST00000561425 ATP2B2Q01814 1243 aa24.57■■□□□ 1.52
TPM1-232ENST00000561425 SHCBP1Q8NEM2 672 aa24.57■■□□□ 1.52
TPM1-232ENST00000561425 NKX2-3Q8TAU0 364 aa24.57■■□□□ 1.52
TPM1-232ENST00000561425 SHISA4Q96DD7 197 aa24.57■■□□□ 1.52
TPM1-232ENST00000561425 CEP95Q96GE4 821 aa24.57■■□□□ 1.52
TPM1-232ENST00000561425 RNF208Q9H0X6 261 aa24.57■■□□□ 1.52
TPM1-232ENST00000561425 PAK6Q9NQU5 681 aaPredicted RBP24.57■■□□□ 1.52
TPM1-232ENST00000561425 BIN2Q9UBW5 565 aaPredicted RBP24.57■■□□□ 1.52
TPM1-232ENST00000561425 CLIP2Q9UDT6 1046 aa24.57■■□□□ 1.52
TPM1-232ENST00000561425 CCDC171Q6TFL3 1326 aa24.57■■□□□ 1.52
TPM1-232ENST00000561425 F5H6K3 240 aa24.56■■□□□ 1.52
TPM1-232ENST00000561425 FLOT1O75955 427 aa24.56■■□□□ 1.52
TPM1-232ENST00000561425 HMGCRP04035 888 aa24.56■■□□□ 1.52
TPM1-232ENST00000561425 PTPREP23469 700 aa24.56■■□□□ 1.52
TPM1-232ENST00000561425 NOVP48745 357 aa24.56■■□□□ 1.52
TPM1-232ENST00000561425 TFAP4Q01664 338 aa24.56■■□□□ 1.52
TPM1-232ENST00000561425 KLRC3Q07444 240 aa24.56■■□□□ 1.52
TPM1-232ENST00000561425 TRIB2Q92519 343 aa24.56■■□□□ 1.52
TPM1-232ENST00000561425 MOV10L1Q9BXT6 1211 aaKnown RBP24.56■■□□□ 1.52
TPM1-232ENST00000561425 SPATC1LQ9H0A9 340 aa24.56■■□□□ 1.52
TPM1-232ENST00000561425 SLC15A5A6NIM6 579 aa24.55■■□□□ 1.52
TPM1-232ENST00000561425 ORC4O43929 436 aa24.55■■□□□ 1.52
TPM1-232ENST00000561425 TTLL1O95922 423 aa24.55■■□□□ 1.52
TPM1-232ENST00000561425 HOXC6P09630 235 aa24.55■■□□□ 1.52
TPM1-232ENST00000561425 CYP2B6P20813 491 aa24.55■■□□□ 1.52
TPM1-232ENST00000561425 CTDSPL2Q05D32 466 aa24.55■■□□□ 1.52
TPM1-232ENST00000561425 MAP3K21Q5TCX8 1036 aa24.55■■□□□ 1.52
TPM1-232ENST00000561425 TRMT44Q8IYL2 757 aaKnown RBP24.55■■□□□ 1.52
TPM1-232ENST00000561425 ATG4CQ96DT6 458 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms