RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 HPS5Q9UPZ3 1129 aa18.49■□□□□ 0.55
AP4E1-205ENST00000561393 TMTC3Q6ZXV5 915 aa18.48■□□□□ 0.55
AP4E1-205ENST00000561393 CTNND2Q9UQB3 1225 aa18.48■□□□□ 0.55
AP4E1-205ENST00000561393 SPAG1Q07617 926 aa18.48■□□□□ 0.55
AP4E1-205ENST00000561393 CCDC40Q4G0X9 1142 aa18.48■□□□□ 0.55
AP4E1-205ENST00000561393 GJA3Q9Y6H8 435 aa18.48■□□□□ 0.55
AP4E1-205ENST00000561393 WWC2Q6AWC2 1192 aa18.48■□□□□ 0.55
AP4E1-205ENST00000561393 CACNA2D4Q7Z3S7 1137 aa18.48■□□□□ 0.55
AP4E1-205ENST00000561393 TCP10L2B9ZVM9 353 aa18.47■□□□□ 0.55
AP4E1-205ENST00000561393 PLCD1P51178 756 aa18.47■□□□□ 0.55
AP4E1-205ENST00000561393 CERKLQ49MI3 558 aaPredicted RBP18.47■□□□□ 0.55
AP4E1-205ENST00000561393 CTAGE1Q96RT6 745 aa18.47■□□□□ 0.55
AP4E1-205ENST00000561393 SAMM50Q9Y512 469 aa18.47■□□□□ 0.55
AP4E1-205ENST00000561393 UBE2Q2LH0YL09 131 aa18.47■□□□□ 0.55
AP4E1-205ENST00000561393 LONRF3Q496Y0 759 aa18.47■□□□□ 0.55
AP4E1-205ENST00000561393 CCDC70Q6NSX1 233 aa18.47■□□□□ 0.55
AP4E1-205ENST00000561393 DGKHQ86XP1 1220 aa18.47■□□□□ 0.55
AP4E1-205ENST00000561393 CEP89Q96ST8 783 aa18.47■□□□□ 0.55
AP4E1-205ENST00000561393 SLC10A5Q5PT55 438 aa18.47■□□□□ 0.55
AP4E1-205ENST00000561393 ZNF397Q8NF99 534 aaPredicted RBP18.47■□□□□ 0.55
AP4E1-205ENST00000561393 MASTLQ96GX5 879 aa18.47■□□□□ 0.55
AP4E1-205ENST00000561393 VPS16Q9H269 839 aa18.47■□□□□ 0.55
AP4E1-205ENST00000561393 LRWD1Q9UFC0 647 aa18.47■□□□□ 0.55
AP4E1-205ENST00000561393 ZNF142P52746 1687 aaPredicted RBP18.47■□□□□ 0.55
AP4E1-205ENST00000561393 TRIM21P19474 475 aaKnown RBP18.46■□□□□ 0.55
AP4E1-205ENST00000561393 GNG11P61952 73 aa18.46■□□□□ 0.55
AP4E1-205ENST00000561393 ADGRA1Q86SQ6 560 aa18.46■□□□□ 0.55
AP4E1-205ENST00000561393 SUPT20HQ8NEM7 779 aa18.46■□□□□ 0.55
AP4E1-205ENST00000561393 TDRD7Q8NHU6 1098 aaKnown RBP18.46■□□□□ 0.55
AP4E1-205ENST00000561393 MRC1P22897 1456 aa18.46■□□□□ 0.55
AP4E1-205ENST00000561393 CLRN2A0PK11 232 aa18.46■□□□□ 0.55
AP4E1-205ENST00000561393 TNIP1Q15025 636 aa18.46■□□□□ 0.55
AP4E1-205ENST00000561393 TBC1D16Q8TBP0 767 aa18.46■□□□□ 0.55
AP4E1-205ENST00000561393 FANCLQ9NW38 375 aa18.46■□□□□ 0.55
AP4E1-205ENST00000561393 TCERG1LQ5VWI1 586 aa18.46■□□□□ 0.55
AP4E1-205ENST00000561393 MROH7-TTC4A0A0A0MT08 1334 aa18.46■□□□□ 0.55
AP4E1-205ENST00000561393 FGFR1OPO95684 399 aaKnown RBP18.46■□□□□ 0.54
AP4E1-205ENST00000561393 SLC16A2P36021 539 aa18.46■□□□□ 0.54
AP4E1-205ENST00000561393 PDE4DQ08499 809 aa18.46■□□□□ 0.54
AP4E1-205ENST00000561393 UBXN4Q92575 508 aa18.46■□□□□ 0.54
AP4E1-205ENST00000561393 EPSTI1Q96J88 318 aa18.46■□□□□ 0.54
AP4E1-205ENST00000561393 DNAI1Q9UI46 699 aa18.46■□□□□ 0.54
AP4E1-205ENST00000561393 FAM208AQ9UK61 1670 aaKnown RBP18.45■□□□□ 0.54
AP4E1-205ENST00000561393 ERMNQ8TAM6 284 aa18.45■□□□□ 0.54
AP4E1-205ENST00000561393 PIGSQ96S52 555 aa18.45■□□□□ 0.54
AP4E1-205ENST00000561393 MAP7D2Q96T17 732 aa18.45■□□□□ 0.54
AP4E1-205ENST00000561393 TMEM47Q9BQJ4 181 aa18.45■□□□□ 0.54
AP4E1-205ENST00000561393 FAM196BA6NMK8 535 aa18.45■□□□□ 0.54
AP4E1-205ENST00000561393 RAD17O75943 681 aa18.45■□□□□ 0.54
AP4E1-205ENST00000561393 KIF4BQ2VIQ3 1234 aa18.45■□□□□ 0.54
AP4E1-205ENST00000561393 LMO7Q8WWI1 1683 aa18.45■□□□□ 0.54
AP4E1-205ENST00000561393 MTERF4Q7Z6M4 381 aaKnown RBP18.45■□□□□ 0.54
AP4E1-205ENST00000561393 PRIMPOLQ96LW4 560 aa18.45■□□□□ 0.54
AP4E1-205ENST00000561393 SYNRGQ9UMZ2 1314 aa18.44■□□□□ 0.54
AP4E1-205ENST00000561393 KIF5CO60282 957 aa18.44■□□□□ 0.54
AP4E1-205ENST00000561393 GYS1P13807 737 aa18.44■□□□□ 0.54
AP4E1-205ENST00000561393 TECP42680 631 aa18.44■□□□□ 0.54
AP4E1-205ENST00000561393 KCTD1Q719H9 257 aa18.44■□□□□ 0.54
AP4E1-205ENST00000561393 CABP7Q86V35 215 aa18.44■□□□□ 0.54
AP4E1-205ENST00000561393 ICA1Q05084 483 aa18.44■□□□□ 0.54
AP4E1-205ENST00000561393 KARSQ15046 597 aaKnown RBP18.44■□□□□ 0.54
AP4E1-205ENST00000561393 CALCRLQ16602 461 aa18.44■□□□□ 0.54
AP4E1-205ENST00000561393 PTPN21Q16825 1174 aa18.44■□□□□ 0.54
AP4E1-205ENST00000561393 SV2BQ7L1I2 683 aa18.44■□□□□ 0.54
AP4E1-205ENST00000561393 DYMQ7RTS9 669 aa18.44■□□□□ 0.54
AP4E1-205ENST00000561393 FMR1NBQ8N0W7 255 aaPredicted RBP18.44■□□□□ 0.54
AP4E1-205ENST00000561393 SNX29Q8TEQ0 813 aa18.44■□□□□ 0.54
AP4E1-205ENST00000561393 EHMT1Q9H9B1 1298 aa18.44■□□□□ 0.54
AP4E1-205ENST00000561393 STK36Q9NRP7 1315 aa18.44■□□□□ 0.54
AP4E1-205ENST00000561393 C21orf2O43822 256 aa18.44■□□□□ 0.54
AP4E1-205ENST00000561393 NIM1KQ8IY84 436 aa18.44■□□□□ 0.54
AP4E1-205ENST00000561393 COA7Q96BR5 231 aa18.44■□□□□ 0.54
AP4E1-205ENST00000561393 TCRBV5S4A2TA0A5A2 114 aa18.43■□□□□ 0.54
AP4E1-205ENST00000561393 KIF20AO95235 890 aa18.43■□□□□ 0.54
AP4E1-205ENST00000561393 GDF11O95390 407 aa18.43■□□□□ 0.54
AP4E1-205ENST00000561393 UBXN1Q04323 297 aa18.43■□□□□ 0.54
AP4E1-205ENST00000561393 C12orf60Q5U649 245 aa18.43■□□□□ 0.54
AP4E1-205ENST00000561393 MTA3Q9BTC8 594 aa18.43■□□□□ 0.54
AP4E1-205ENST00000561393 LRRC27Q9C0I9 530 aa18.43■□□□□ 0.54
AP4E1-205ENST00000561393 ARHGEF10LQ9HCE6 1279 aa18.43■□□□□ 0.54
AP4E1-205ENST00000561393 ERCC3P19447 782 aa18.43■□□□□ 0.54
AP4E1-205ENST00000561393 TDRD12Q587J7 1177 aaKnown RBP18.43■□□□□ 0.54
AP4E1-205ENST00000561393 SPICE1Q8N0Z3 855 aa18.43■□□□□ 0.54
AP4E1-205ENST00000561393 PKNOX2Q96KN3 472 aa18.43■□□□□ 0.54
AP4E1-205ENST00000561393 PCDHA4Q9UN74 947 aa18.43■□□□□ 0.54
AP4E1-205ENST00000561393 NEK8Q86SG6 692 aa18.43■□□□□ 0.54
AP4E1-205ENST00000561393 FAM114A1Q8IWE2 563 aa18.43■□□□□ 0.54
AP4E1-205ENST00000561393 FNBP4Q8N3X1 1017 aaPredicted RBP18.43■□□□□ 0.54
AP4E1-205ENST00000561393 COBLO75128 1261 aa18.42■□□□□ 0.54
AP4E1-205ENST00000561393 WDHD1O75717 1129 aaPredicted RBP18.42■□□□□ 0.54
AP4E1-205ENST00000561393 WDR78Q5VTH9 848 aa18.42■□□□□ 0.54
AP4E1-205ENST00000561393 SLFN13Q68D06 897 aa18.42■□□□□ 0.54
AP4E1-205ENST00000561393 EEF2KMTQ96G04 330 aa18.42■□□□□ 0.54
AP4E1-205ENST00000561393 RAD51AP2Q09MP3 1159 aa18.42■□□□□ 0.54
AP4E1-205ENST00000561393 TRAF1Q13077 416 aa18.42■□□□□ 0.54
AP4E1-205ENST00000561393 SMYD4Q8IYR2 804 aaPredicted RBP18.42■□□□□ 0.54
AP4E1-205ENST00000561393 PDCL2Q8N4E4 241 aa18.42■□□□□ 0.54
AP4E1-205ENST00000561393 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.42■□□□□ 0.54
AP4E1-205ENST00000561393 V9GYY5 206 aaPredicted RBP18.42■□□□□ 0.54
AP4E1-205ENST00000561393 RIC1Q4ADV7 1423 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms