RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 DPP9Q86TI2 863 aa12.15□□□□□ -0.46
TPM1-225ENST00000560679 CDCA7LQ96GN5 454 aa12.15□□□□□ -0.46
TPM1-225ENST00000560679 API5Q9BZZ5 524 aaKnown RBP12.15□□□□□ -0.46
TPM1-225ENST00000560679 SPATC1LQ9H0A9 340 aa12.15□□□□□ -0.46
TPM1-225ENST00000560679 EHD4Q9H223 541 aa12.15□□□□□ -0.46
TPM1-225ENST00000560679 PHF24Q9UPV7 400 aa12.15□□□□□ -0.46
TPM1-225ENST00000560679 HDAC5Q9UQL6 1122 aa12.15□□□□□ -0.46
TPM1-225ENST00000560679 ROBO3Q96MS0 1386 aa12.15□□□□□ -0.46
TPM1-225ENST00000560679 NCOR1O75376 2440 aa12.15□□□□□ -0.47
TPM1-225ENST00000560679 KIAA0355O15063 1070 aa12.14□□□□□ -0.47
TPM1-225ENST00000560679 ANP32CO43423 234 aa12.14□□□□□ -0.47
TPM1-225ENST00000560679 ERCC3P19447 782 aa12.14□□□□□ -0.47
TPM1-225ENST00000560679 ATF7IPQ6VMQ6 1270 aa12.14□□□□□ -0.47
TPM1-225ENST00000560679 MAML3Q96JK9 1138 aa12.14□□□□□ -0.47
TPM1-225ENST00000560679 DBNDD2Q9BQY9 259 aa12.14□□□□□ -0.47
TPM1-225ENST00000560679 SMCHD1A6NHR9 2005 aa12.13□□□□□ -0.47
TPM1-225ENST00000560679 A0A1W2PRG0 241 aa12.13□□□□□ -0.47
TPM1-225ENST00000560679 CCER2I3L3R5 266 aa12.13□□□□□ -0.47
TPM1-225ENST00000560679 GNAI3P08754 354 aa12.13□□□□□ -0.47
TPM1-225ENST00000560679 PLA2G5P39877 138 aa12.13□□□□□ -0.47
TPM1-225ENST00000560679 ZAP70P43403 619 aa12.13□□□□□ -0.47
TPM1-225ENST00000560679 EVX2Q03828 476 aa12.13□□□□□ -0.47
TPM1-225ENST00000560679 ABCB5Q2M3G0 1257 aa12.13□□□□□ -0.47
TPM1-225ENST00000560679 CERKLQ49MI3 558 aaPredicted RBP12.13□□□□□ -0.47
TPM1-225ENST00000560679 KIAA1755Q5JYT7 1200 aa12.13□□□□□ -0.47
TPM1-225ENST00000560679 TTC39AQ5SRH9 613 aa12.13□□□□□ -0.47
TPM1-225ENST00000560679 TRMT2AQ8IZ69 625 aaKnown RBP12.13□□□□□ -0.47
TPM1-225ENST00000560679 MIGA1Q8NAN2 632 aa12.13□□□□□ -0.47
TPM1-225ENST00000560679 SHCBP1Q8NEM2 672 aa12.13□□□□□ -0.47
TPM1-225ENST00000560679 LENG1Q96BZ8 264 aaPredicted RBP12.13□□□□□ -0.47
TPM1-225ENST00000560679 ZNF576Q9H609 170 aa12.13□□□□□ -0.47
TPM1-225ENST00000560679 SERPINB13Q9UIV8 391 aa12.13□□□□□ -0.47
TPM1-225ENST00000560679 TACC3Q9Y6A5 838 aa12.13□□□□□ -0.47
TPM1-225ENST00000560679 COL11A1P12107 1806 aaPredicted RBP12.13□□□□□ -0.47
TPM1-225ENST00000560679 PLXNA1Q9UIW2 1896 aa12.12□□□□□ -0.47
TPM1-225ENST00000560679 A0A1W2PQ45 241 aaPredicted RBP12.12□□□□□ -0.47
TPM1-225ENST00000560679 A0A1W2PQY0 241 aa12.12□□□□□ -0.47
TPM1-225ENST00000560679 STRNO43815 780 aa12.12□□□□□ -0.47
TPM1-225ENST00000560679 PQBP1O60828 265 aaKnown RBP12.12□□□□□ -0.47
TPM1-225ENST00000560679 CYP7A1P22680 504 aa12.12□□□□□ -0.47
TPM1-225ENST00000560679 PLCD1P51178 756 aa12.12□□□□□ -0.47
TPM1-225ENST00000560679 FPGSQ05932 587 aa12.12□□□□□ -0.47
TPM1-225ENST00000560679 SEPT2Q15019 361 aa12.12□□□□□ -0.47
TPM1-225ENST00000560679 TNNI3KQ59H18 835 aa12.12□□□□□ -0.47
TPM1-225ENST00000560679 TIFAQ96CG3 184 aa12.12□□□□□ -0.47
TPM1-225ENST00000560679 XPNPEP3Q9NQH7 507 aa12.12□□□□□ -0.47
TPM1-225ENST00000560679 FPGT-TNNI3KV9GXZ4 949 aa12.12□□□□□ -0.47
TPM1-225ENST00000560679 ZNFX1Q9P2E3 1918 aaKnown RBP12.11□□□□□ -0.47
TPM1-225ENST00000560679 PGK1P00558 417 aa12.11□□□□□ -0.47
TPM1-225ENST00000560679 RAG1P15918 1043 aa12.11□□□□□ -0.47
TPM1-225ENST00000560679 TAL1P17542 331 aaPredicted RBP12.11□□□□□ -0.47
TPM1-225ENST00000560679 PBX2P40425 430 aa12.11□□□□□ -0.47
TPM1-225ENST00000560679 GABPAQ06546 454 aa12.11□□□□□ -0.47
TPM1-225ENST00000560679 FAAP100Q0VG06 881 aa12.11□□□□□ -0.47
TPM1-225ENST00000560679 COG2Q14746 738 aa12.11□□□□□ -0.47
TPM1-225ENST00000560679 ABRAQ8N0Z2 381 aa12.11□□□□□ -0.47
TPM1-225ENST00000560679 ADAMTS19Q8TE59 1207 aa12.11□□□□□ -0.47
TPM1-225ENST00000560679 TANGO6Q9C0B7 1094 aa12.11□□□□□ -0.47
TPM1-225ENST00000560679 GPR108Q9NPR9 543 aa12.11□□□□□ -0.47
TPM1-225ENST00000560679 TLR7Q9NYK1 1049 aaKnown RBP12.11□□□□□ -0.47
TPM1-225ENST00000560679 TNNQ9UQP3 1299 aa12.11□□□□□ -0.47
TPM1-225ENST00000560679 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.1□□□□□ -0.47
TPM1-225ENST00000560679 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.1□□□□□ -0.47
TPM1-225ENST00000560679 ADAMTS4O75173 837 aa12.1□□□□□ -0.47
TPM1-225ENST00000560679 RARBP10826 455 aa12.1□□□□□ -0.47
TPM1-225ENST00000560679 USP5P45974 858 aa12.1□□□□□ -0.47
TPM1-225ENST00000560679 G3BP1Q13283 466 aaKnown RBP eCLIP12.1□□□□□ -0.47
TPM1-225ENST00000560679 ADGRE1Q14246 886 aa12.1□□□□□ -0.47
TPM1-225ENST00000560679 RASIP1Q5U651 963 aa12.1□□□□□ -0.47
TPM1-225ENST00000560679 ANKRD33Q7Z3H0 272 aa12.1□□□□□ -0.47
TPM1-225ENST00000560679 ATXN2LQ8WWM7 1075 aaKnown RBP12.1□□□□□ -0.47
TPM1-225ENST00000560679 PPM1EQ8WY54 764 aa12.1□□□□□ -0.47
TPM1-225ENST00000560679 ATG4CQ96DT6 458 aa12.1□□□□□ -0.47
TPM1-225ENST00000560679 ZNF512BQ96KM6 892 aaPredicted RBP12.1□□□□□ -0.47
TPM1-225ENST00000560679 ASB2Q96Q27 587 aa12.1□□□□□ -0.47
TPM1-225ENST00000560679 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.1□□□□□ -0.471e-6■□□□□ 10.6
TPM1-225ENST00000560679 PBX4Q9BYU1 374 aa12.1□□□□□ -0.47
TPM1-225ENST00000560679 TMEM39AQ9NV64 488 aa12.1□□□□□ -0.47
TPM1-225ENST00000560679 THEGQ9P2T0 379 aa12.1□□□□□ -0.47
TPM1-225ENST00000560679 DBNLQ9UJU6 430 aaKnown RBP12.1□□□□□ -0.47
TPM1-225ENST00000560679 TBX21Q9UL17 535 aa12.1□□□□□ -0.47
TPM1-225ENST00000560679 GBF1Q92538 1859 aa12.1□□□□□ -0.47
TPM1-225ENST00000560679 TRANK1O15050 2925 aa12.09□□□□□ -0.47
TPM1-225ENST00000560679 GRXCR1A8MXD5 290 aa12.09□□□□□ -0.47
TPM1-225ENST00000560679 IGSF3O75054 1194 aa12.09□□□□□ -0.47
TPM1-225ENST00000560679 IDH1O75874 414 aaKnown RBP12.09□□□□□ -0.47
TPM1-225ENST00000560679 GNAI2P04899 355 aa12.09□□□□□ -0.47
TPM1-225ENST00000560679 DSG3P32926 999 aa12.09□□□□□ -0.47
TPM1-225ENST00000560679 CCDC158Q5M9N0 1113 aa12.09□□□□□ -0.47
TPM1-225ENST00000560679 AKNAD1Q5T1N1 836 aa12.09□□□□□ -0.47
TPM1-225ENST00000560679 C16orf59Q7L2K0 433 aa12.09□□□□□ -0.47
TPM1-225ENST00000560679 RNF180Q86T96 592 aa12.09□□□□□ -0.47
TPM1-225ENST00000560679 NCAPG2Q86XI2 1143 aa12.09□□□□□ -0.47
TPM1-225ENST00000560679 CLEC10AQ8IUN9 316 aa12.09□□□□□ -0.47
TPM1-225ENST00000560679 MB21D1Q8N884 522 aa12.09□□□□□ -0.47
TPM1-225ENST00000560679 UHRF1Q96T88 793 aaPredicted RBP12.09□□□□□ -0.47
TPM1-225ENST00000560679 PRDM12Q9H4Q4 367 aa12.09□□□□□ -0.47
TPM1-225ENST00000560679 MROH8Q9H579 483 aa12.09□□□□□ -0.47
TPM1-225ENST00000560679 CABP5Q9NP86 173 aa12.09□□□□□ -0.47
TPM1-225ENST00000560679 NRBP1Q9UHY1 535 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms