RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 IREB2P48200 963 aaKnown RBP12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 KRT26Q7Z3Y9 468 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 TSG101Q99816 390 aa12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 ZNHIT6Q9NWK9 470 aaKnown RBP12.05□□□□□ -0.48
CARMIL3-202ENST00000559694 CCNT1O60563 726 aaKnown RBP12.04□□□□□ -0.48
CARMIL3-202ENST00000559694 EIF3JO75822 258 aaKnown RBP12.04□□□□□ -0.48
CARMIL3-202ENST00000559694 NECTIN1Q15223 517 aa12.04□□□□□ -0.48
CARMIL3-202ENST00000559694 AXDND1Q5T1B0 1012 aaPredicted RBP12.04□□□□□ -0.48
CARMIL3-202ENST00000559694 FBXO33Q7Z6M2 555 aa12.04□□□□□ -0.48
CARMIL3-202ENST00000559694 NSUN4Q96CB9 384 aaKnown RBP12.04□□□□□ -0.48
CARMIL3-202ENST00000559694 FMN2Q9NZ56 1722 aa12.04□□□□□ -0.48
CARMIL3-202ENST00000559694 ERLIN1O75477 346 aa12.04□□□□□ -0.48
CARMIL3-202ENST00000559694 CHGBP05060 677 aa12.04□□□□□ -0.48
CARMIL3-202ENST00000559694 ILDR1Q86SU0 546 aaPredicted RBP12.04□□□□□ -0.48
CARMIL3-202ENST00000559694 FBXO11Q86XK2 927 aa12.04□□□□□ -0.48
CARMIL3-202ENST00000559694 PCDHA1Q9Y5I3 950 aa12.04□□□□□ -0.48
CARMIL3-202ENST00000559694 RIOK3O14730 519 aaKnown RBP12.04□□□□□ -0.48
CARMIL3-202ENST00000559694 ASNSP08243 561 aa12.04□□□□□ -0.48
CARMIL3-202ENST00000559694 USP17L2Q6R6M4 530 aa12.04□□□□□ -0.48
CARMIL3-202ENST00000559694 GPKOWQ92917 476 aaPredicted RBP eCLIP12.04□□□□□ -0.48
CARMIL3-202ENST00000559694 GPHNQ9NQX3 736 aaPredicted RBP12.04□□□□□ -0.48
CARMIL3-202ENST00000559694 OGFRQ9NZT2 677 aa12.04□□□□□ -0.48
CARMIL3-202ENST00000559694 POLLQ9UGP5 575 aa12.04□□□□□ -0.48
CARMIL3-202ENST00000559694 TGFB2P61812 414 aa12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 ASIC1P78348 528 aa12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 LRRC27Q9C0I9 530 aa12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 XRN1Q8IZH2 1706 aaKnown RBP12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 PFKFB2O60825 505 aa12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 KIF4BQ2VIQ3 1234 aa12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 ANO6Q4KMQ2 910 aa12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 GPATCH4Q5T3I0 446 aaKnown RBP12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 KRT25Q7Z3Z0 450 aa12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 ANKRD35Q8N283 1001 aa12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 CCDC102AQ96A19 550 aa12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 PSTPIP2Q9H939 334 aa12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 IQCA1LA6NCM1 817 aa12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 PSMD14O00487 310 aa12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 SKILP12757 684 aa12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 SNW1Q13573 536 aaKnown RBP12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 TCERG1LQ5VWI1 586 aa12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 TXNRD3Q86VQ6 643 aa12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 NCAPG2Q86XI2 1143 aa12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 KRI1Q8N9T8 703 aaKnown RBP12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 WRNIP1Q96S55 665 aa12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 SCAF8Q9UPN6 1271 aaKnown RBP12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 DAGLAQ9Y4D2 1042 aa12.03□□□□□ -0.48
CARMIL3-202ENST00000559694 ODF2Q5BJF6 829 aa12.02□□□□□ -0.48
CARMIL3-202ENST00000559694 TDRD7Q8NHU6 1098 aaKnown RBP12.02□□□□□ -0.48
CARMIL3-202ENST00000559694 GSG1L2A8MUP6 293 aa12.02□□□□□ -0.48
CARMIL3-202ENST00000559694 DDX39AO00148 427 aaKnown RBP12.02□□□□□ -0.48
CARMIL3-202ENST00000559694 CBFA2T2O43439 604 aa12.02□□□□□ -0.48
CARMIL3-202ENST00000559694 DDAH1O94760 285 aa12.02□□□□□ -0.48
CARMIL3-202ENST00000559694 BMP3P12645 472 aa12.02□□□□□ -0.48
CARMIL3-202ENST00000559694 TTC38Q5R3I4 469 aa12.02□□□□□ -0.48
CARMIL3-202ENST00000559694 STXBP4Q6ZWJ1 553 aa12.02□□□□□ -0.48
CARMIL3-202ENST00000559694 CAGE1Q8TC20 777 aa12.02□□□□□ -0.48
CARMIL3-202ENST00000559694 EXOC1Q9NV70 894 aa12.02□□□□□ -0.48
CARMIL3-202ENST00000559694 SCG2P13521 617 aa12.02□□□□□ -0.49
CARMIL3-202ENST00000559694 ANO1Q5XXA6 986 aa12.02□□□□□ -0.49
CARMIL3-202ENST00000559694 TCHPQ9BT92 498 aa12.02□□□□□ -0.49
CARMIL3-202ENST00000559694 ZNF341Q9BYN7 854 aa12.02□□□□□ -0.49
CARMIL3-202ENST00000559694 DEF6Q9H4E7 631 aa12.02□□□□□ -0.49
CARMIL3-202ENST00000559694 CCPG1Q9ULG6 757 aa12.02□□□□□ -0.49
CARMIL3-202ENST00000559694 SUGT1Q9Y2Z0 365 aa12.02□□□□□ -0.49
CARMIL3-202ENST00000559694 GMPSP49915 693 aaPredicted RBP12.02□□□□□ -0.49
CARMIL3-202ENST00000559694 PKP1Q13835 747 aa12.02□□□□□ -0.49
CARMIL3-202ENST00000559694 RASA3Q14644 834 aa12.02□□□□□ -0.49
CARMIL3-202ENST00000559694 CDC37L1Q7L3B6 337 aa12.02□□□□□ -0.49
CARMIL3-202ENST00000559694 BICD1Q96G01 975 aa12.02□□□□□ -0.49
CARMIL3-202ENST00000559694 ZHX2Q9Y6X8 837 aa12.02□□□□□ -0.49
CARMIL3-202ENST00000559694 ZMYM6O95789 1325 aa12.01□□□□□ -0.49
CARMIL3-202ENST00000559694 A0A1B0GVL5 298 aa12.01□□□□□ -0.49
CARMIL3-202ENST00000559694 RSBN1LQ6PCB5 846 aaPredicted RBP12.01□□□□□ -0.49
CARMIL3-202ENST00000559694 TMED8Q6PL24 325 aaPredicted RBP12.01□□□□□ -0.49
CARMIL3-202ENST00000559694 C2orf69Q8N8R5 385 aa12.01□□□□□ -0.49
CARMIL3-202ENST00000559694 NAP1L4Q99733 375 aaKnown RBP12.01□□□□□ -0.49
CARMIL3-202ENST00000559694 MRPL11Q9Y3B7 192 aaKnown RBP12.01□□□□□ -0.49
CARMIL3-202ENST00000559694 SCRN1Q12765 414 aa12.01□□□□□ -0.49
CARMIL3-202ENST00000559694 SEPT2Q15019 361 aa12.01□□□□□ -0.49
CARMIL3-202ENST00000559694 SAMD7Q7Z3H4 446 aa12.01□□□□□ -0.49
CARMIL3-202ENST00000559694 PXDNLA1KZ92 1463 aa12.01□□□□□ -0.49
CARMIL3-202ENST00000559694 BTBD18B2RXH4 712 aa12.01□□□□□ -0.49
CARMIL3-202ENST00000559694 NOP56O00567 594 aaKnown RBP12.01□□□□□ -0.49
CARMIL3-202ENST00000559694 USP14P54578 494 aa12.01□□□□□ -0.49
CARMIL3-202ENST00000559694 GSDMDP57764 484 aa12.01□□□□□ -0.49
CARMIL3-202ENST00000559694 TMEM179Q6ZVK1 233 aa12.01□□□□□ -0.49
CARMIL3-202ENST00000559694 IQUBQ8NA54 791 aa12.01□□□□□ -0.49
CARMIL3-202ENST00000559694 AMNQ9BXJ7 453 aa12.01□□□□□ -0.49
CARMIL3-202ENST00000559694 ABCC12Q96J65 1359 aa12.01□□□□□ -0.49
CARMIL3-202ENST00000559694 SPECC1Q5M775 1068 aa12□□□□□ -0.49
CARMIL3-202ENST00000559694 PRAMEF18Q5VWM3 479 aa12□□□□□ -0.49
CARMIL3-202ENST00000559694 BCL2L12Q9HB09 334 aa12□□□□□ -0.49
CARMIL3-202ENST00000559694 FGFR1OPO95684 399 aaKnown RBP12□□□□□ -0.49
CARMIL3-202ENST00000559694 LMNB1P20700 586 aa12□□□□□ -0.49
CARMIL3-202ENST00000559694 SPP2Q13103 211 aa12□□□□□ -0.49
CARMIL3-202ENST00000559694 CCDC40Q4G0X9 1142 aa12□□□□□ -0.49
CARMIL3-202ENST00000559694 ASPRV1Q53RT3 343 aa12□□□□□ -0.49
CARMIL3-202ENST00000559694 CTR9Q6PD62 1173 aa12□□□□□ -0.49
CARMIL3-202ENST00000559694 TICAM2Q86XR7 235 aa12□□□□□ -0.49
CARMIL3-202ENST00000559694 TBC1D10CQ8IV04 446 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms