RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 BRCA2P51587 3418 aa15.03■□□□□ -0
LRRC28-214ENST00000559433 ADCY3O60266 1144 aa15.03■□□□□ -0
LRRC28-214ENST00000559433 ERVK-9P63128 1117 aa15.03■□□□□ -0
LRRC28-214ENST00000559433 ERVK-24P63145 666 aa15.03■□□□□ -0
LRRC28-214ENST00000559433 ATP2B2Q01814 1243 aa15.03■□□□□ -0
LRRC28-214ENST00000559433 TANGO6Q9C0B7 1094 aa15.03■□□□□ -0
LRRC28-214ENST00000559433 NAPBQ9H115 298 aa15.03■□□□□ -0
LRRC28-214ENST00000559433 RBPJLQ9UBG7 517 aa15.03■□□□□ -0
LRRC28-214ENST00000559433 RLFQ13129 1914 aa15.03■□□□□ -0
LRRC28-214ENST00000559433 A0A0G2JMZ2 1700 aa15.03■□□□□ -0
LRRC28-214ENST00000559433 RASA1P20936 1047 aa15.02■□□□□ -0
LRRC28-214ENST00000559433 SIAH1Q8IUQ4 282 aa15.02■□□□□ -0
LRRC28-214ENST00000559433 PLEKHM2Q8IWE5 1019 aa15.02■□□□□ -0
LRRC28-214ENST00000559433 NKX2-3Q8TAU0 364 aa15.02■□□□□ -0
LRRC28-214ENST00000559433 RILPL2Q969X0 211 aa15.02■□□□□ -0
LRRC28-214ENST00000559433 RNF208Q9H0X6 261 aa15.02■□□□□ -0
LRRC28-214ENST00000559433 KANSL2Q9H9L4 492 aa15.02■□□□□ -0
LRRC28-214ENST00000559433 ZNF287Q9HBT7 754 aa15.02■□□□□ -0
LRRC28-214ENST00000559433 TMX2Q9Y320 296 aa15.02■□□□□ -0
LRRC28-214ENST00000559433 EEF2P13639 858 aaKnown RBP15.01□□□□□ -0.01
LRRC28-214ENST00000559433 ELNP15502 786 aa15.01□□□□□ -0.01
LRRC28-214ENST00000559433 CCNA1P78396 465 aa15.01□□□□□ -0.01
LRRC28-214ENST00000559433 IRF5Q13568 498 aa15.01□□□□□ -0.01
LRRC28-214ENST00000559433 KIAA1755Q5JYT7 1200 aa15.01□□□□□ -0.01
LRRC28-214ENST00000559433 POTEEQ6S8J3 1075 aa15.01□□□□□ -0.01
LRRC28-214ENST00000559433 SPICE1Q8N0Z3 855 aa15.01□□□□□ -0.01
LRRC28-214ENST00000559433 LPAR1Q92633 364 aa15.01□□□□□ -0.01
LRRC28-214ENST00000559433 FAM227BQ96M60 508 aa15.01□□□□□ -0.01
LRRC28-214ENST00000559433 VCPKMTQ9H867 229 aa15.01□□□□□ -0.01
LRRC28-214ENST00000559433 HELLSQ9NRZ9 838 aa15.01□□□□□ -0.01
LRRC28-214ENST00000559433 RABGAP1Q9Y3P9 1069 aa15.01□□□□□ -0.01
LRRC28-214ENST00000559433 A0A0D9SFI3 127 aa15□□□□□ -0.01
LRRC28-214ENST00000559433 SPDYE16A6NNV3 312 aaPredicted RBP15□□□□□ -0.01
LRRC28-214ENST00000559433 RAD21O60216 631 aa15□□□□□ -0.01
LRRC28-214ENST00000559433 PRDM1O75626 825 aa15□□□□□ -0.01
LRRC28-214ENST00000559433 SLC3A2P08195 630 aaKnown RBP15□□□□□ -0.01
LRRC28-214ENST00000559433 CCL5P13501 91 aa15□□□□□ -0.01
LRRC28-214ENST00000559433 MAPK4P31152 587 aa15□□□□□ -0.01
LRRC28-214ENST00000559433 PPARAQ07869 468 aa15□□□□□ -0.01
LRRC28-214ENST00000559433 MTFR1Q15390 333 aa15□□□□□ -0.01
LRRC28-214ENST00000559433 Q3C1V9 767 aa15□□□□□ -0.01
LRRC28-214ENST00000559433 TICAM2Q86XR7 235 aa15□□□□□ -0.01
LRRC28-214ENST00000559433 ZNF444Q8N0Y2 327 aaPredicted RBP15□□□□□ -0.01
LRRC28-214ENST00000559433 PXYLP1Q8TE99 480 aa15□□□□□ -0.01
LRRC28-214ENST00000559433 GNL3Q9BVP2 549 aaKnown RBP eCLIP15□□□□□ -0.01
LRRC28-214ENST00000559433 OSBPL3Q9H4L5 887 aa15□□□□□ -0.01
LRRC28-214ENST00000559433 HOXC10Q9NYD6 342 aa15□□□□□ -0.01
LRRC28-214ENST00000559433 COL11A1P12107 1806 aaPredicted RBP15□□□□□ -0.01
LRRC28-214ENST00000559433 PDE4DIPQ5VU43 2346 aa14.99□□□□□ -0.01
LRRC28-214ENST00000559433 FOXP2O15409 715 aa14.99□□□□□ -0.01
LRRC28-214ENST00000559433 CNMDO75829 334 aa14.99□□□□□ -0.01
LRRC28-214ENST00000559433 INHAP05111 366 aa14.99□□□□□ -0.01
LRRC28-214ENST00000559433 PDE4BQ07343 736 aa14.99□□□□□ -0.01
LRRC28-214ENST00000559433 NMIQ13287 307 aaPredicted RBP14.99□□□□□ -0.01
LRRC28-214ENST00000559433 MCMDC2Q4G0Z9 681 aa14.99□□□□□ -0.01
LRRC28-214ENST00000559433 VPS53Q5VIR6 699 aa14.99□□□□□ -0.01
LRRC28-214ENST00000559433 WDR78Q5VTH9 848 aa14.99□□□□□ -0.01
LRRC28-214ENST00000559433 LBX2Q6XYB7 198 aa14.99□□□□□ -0.01
LRRC28-214ENST00000559433 PORCNQ9H237 461 aa14.99□□□□□ -0.01
LRRC28-214ENST00000559433 GOPCQ9HD26 462 aa14.99□□□□□ -0.01
LRRC28-214ENST00000559433 WDR46O15213 610 aaKnown RBP14.98□□□□□ -0.01
LRRC28-214ENST00000559433 FLOT1O75955 427 aa14.98□□□□□ -0.01
LRRC28-214ENST00000559433 COG2Q14746 738 aa14.98□□□□□ -0.01
LRRC28-214ENST00000559433 GPR142Q7Z601 462 aa14.98□□□□□ -0.01
LRRC28-214ENST00000559433 PLEKHH3Q7Z736 793 aa14.98□□□□□ -0.01
LRRC28-214ENST00000559433 SOCS4Q8WXH5 440 aa14.98□□□□□ -0.01
LRRC28-214ENST00000559433 NUDT12Q9BQG2 462 aa14.98□□□□□ -0.01
LRRC28-214ENST00000559433 BTBD7Q9P203 1132 aa14.98□□□□□ -0.01
LRRC28-214ENST00000559433 GJD2Q9UKL4 321 aa14.98□□□□□ -0.01
LRRC28-214ENST00000559433 LAMA4Q16363 1823 aa14.97□□□□□ -0.01
LRRC28-214ENST00000559433 TFRCP02786 760 aaKnown RBP14.97□□□□□ -0.01
LRRC28-214ENST00000559433 GJB1P08034 283 aa14.97□□□□□ -0.01
LRRC28-214ENST00000559433 TSPY3P0CV98 308 aa14.97□□□□□ -0.01
LRRC28-214ENST00000559433 TSPY8P0CW00 308 aa14.97□□□□□ -0.01
LRRC28-214ENST00000559433 SDSP20132 328 aa14.97□□□□□ -0.01
LRRC28-214ENST00000559433 UNC93B1Q9H1C4 597 aa14.97□□□□□ -0.01
LRRC28-214ENST00000559433 PLIN4Q96Q06 1357 aa14.97□□□□□ -0.01
LRRC28-214ENST00000559433 CCDC171Q6TFL3 1326 aa14.96□□□□□ -0.01
LRRC28-214ENST00000559433 IGKV6D-41A0A0C4DH26 115 aa14.96□□□□□ -0.01
LRRC28-214ENST00000559433 HMGCRP04035 888 aa14.96□□□□□ -0.01
LRRC28-214ENST00000559433 CAPN2P17655 700 aa14.96□□□□□ -0.01
LRRC28-214ENST00000559433 CYP2B6P20813 491 aa14.96□□□□□ -0.01
LRRC28-214ENST00000559433 CTDSPL2Q05D32 466 aa14.96□□□□□ -0.01
LRRC28-214ENST00000559433 FAM47AQ5JRC9 791 aa14.96□□□□□ -0.01
LRRC28-214ENST00000559433 PRPF38BQ5VTL8 546 aaKnown RBP14.96□□□□□ -0.01
LRRC28-214ENST00000559433 ZNF589Q86UQ0 364 aaPredicted RBP14.96□□□□□ -0.01
LRRC28-214ENST00000559433 TRMT44Q8IYL2 757 aaKnown RBP14.96□□□□□ -0.01
LRRC28-214ENST00000559433 CEP95Q96GE4 821 aa14.96□□□□□ -0.01
LRRC28-214ENST00000559433 DIAPH3Q9NSV4 1193 aa14.96□□□□□ -0.01
LRRC28-214ENST00000559433 NYAP2Q9P242 653 aa14.96□□□□□ -0.01
LRRC28-214ENST00000559433 CLIP2Q9UDT6 1046 aa14.96□□□□□ -0.01
LRRC28-214ENST00000559433 IVNS1ABPQ9Y6Y0 642 aa14.96□□□□□ -0.01
LRRC28-214ENST00000559433 ZNF236Q9UL36 1845 aa14.95□□□□□ -0.02
LRRC28-214ENST00000559433 PDE4AP27815 886 aa14.95□□□□□ -0.02
LRRC28-214ENST00000559433 DSG3P32926 999 aa14.95□□□□□ -0.02
LRRC28-214ENST00000559433 RGS2P41220 211 aa14.95□□□□□ -0.02
LRRC28-214ENST00000559433 GJA8P48165 433 aa14.95□□□□□ -0.02
LRRC28-214ENST00000559433 MFAP1P55081 439 aaKnown RBP14.95□□□□□ -0.02
LRRC28-214ENST00000559433 TFAP4Q01664 338 aa14.95□□□□□ -0.02
LRRC28-214ENST00000559433 ALX1Q15699 326 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms