RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 TDO2P48775 406 aa18.49■□□□□ 0.55
LINC01220-201ENST00000558575 CDK8P49336 464 aa18.49■□□□□ 0.55
LINC01220-201ENST00000558575 IRF5Q13568 498 aa18.49■□□□□ 0.55
LINC01220-201ENST00000558575 C16orf86Q6ZW13 317 aa18.49■□□□□ 0.55
LINC01220-201ENST00000558575 NACAP1Q9BZK3 213 aa18.49■□□□□ 0.55
LINC01220-201ENST00000558575 NAPBQ9H115 298 aa18.49■□□□□ 0.55
LINC01220-201ENST00000558575 GDF11O95390 407 aa18.48■□□□□ 0.55
LINC01220-201ENST00000558575 PTPRAP18433 802 aa18.48■□□□□ 0.55
LINC01220-201ENST00000558575 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.48■□□□□ 0.55
LINC01220-201ENST00000558575 NAV1Q8NEY1 1877 aa18.48■□□□□ 0.55
LINC01220-201ENST00000558575 MFAP1P55081 439 aaKnown RBP18.47■□□□□ 0.55
LINC01220-201ENST00000558575 PTH1RQ03431 593 aa18.47■□□□□ 0.55
LINC01220-201ENST00000558575 PPARAQ07869 468 aa18.47■□□□□ 0.55
LINC01220-201ENST00000558575 STK11IPQ8N1F8 1099 aa18.47■□□□□ 0.55
LINC01220-201ENST00000558575 TRIM34Q9BYJ4 488 aa18.47■□□□□ 0.55
LINC01220-201ENST00000558575 UBE2OQ9C0C9 1292 aaKnown RBP18.47■□□□□ 0.55
LINC01220-201ENST00000558575 INCENPQ9NQS7 918 aa18.47■□□□□ 0.55
LINC01220-201ENST00000558575 RAD50Q92878 1312 aa18.47■□□□□ 0.55
LINC01220-201ENST00000558575 GUCY1A2P33402 732 aa18.46■□□□□ 0.55
LINC01220-201ENST00000558575 CERKLQ49MI3 558 aaPredicted RBP18.46■□□□□ 0.55
LINC01220-201ENST00000558575 RUFY2Q8WXA3 655 aa18.46■□□□□ 0.55
LINC01220-201ENST00000558575 ESYT1Q9BSJ8 1104 aa18.46■□□□□ 0.55
LINC01220-201ENST00000558575 DSCC1Q9BVC3 393 aa18.46■□□□□ 0.55
LINC01220-201ENST00000558575 SWAP70Q9UH65 585 aa18.46■□□□□ 0.55
LINC01220-201ENST00000558575 TAOK2Q9UL54 1235 aa18.46■□□□□ 0.55
LINC01220-201ENST00000558575 GTF3C3Q9Y5Q9 886 aa18.46■□□□□ 0.55
LINC01220-201ENST00000558575 ZHX2Q9Y6X8 837 aa18.46■□□□□ 0.55
LINC01220-201ENST00000558575 LTBP2Q14767 1821 aa18.46■□□□□ 0.55
LINC01220-201ENST00000558575 ROBO3Q96MS0 1386 aa18.45■□□□□ 0.54
LINC01220-201ENST00000558575 POTEB2H3BUK9 544 aa18.45■□□□□ 0.54
LINC01220-201ENST00000558575 GH2P01242 217 aa18.45■□□□□ 0.54
LINC01220-201ENST00000558575 CTDSPL2Q05D32 466 aa18.45■□□□□ 0.54
LINC01220-201ENST00000558575 AMOTL1Q8IY63 956 aa18.45■□□□□ 0.54
LINC01220-201ENST00000558575 ANKLE1Q8NAG6 615 aa18.45■□□□□ 0.54
LINC01220-201ENST00000558575 NBPF3Q9H094 633 aa18.45■□□□□ 0.54
LINC01220-201ENST00000558575 PICK1Q9NRD5 415 aa18.45■□□□□ 0.54
LINC01220-201ENST00000558575 ANAPC4Q9UJX5 808 aa18.45■□□□□ 0.54
LINC01220-201ENST00000558575 ZBTB21Q9ULJ3 1066 aa18.45■□□□□ 0.54
LINC01220-201ENST00000558575 AFG3L2Q9Y4W6 797 aa18.45■□□□□ 0.54
LINC01220-201ENST00000558575 ZMYM6O95789 1325 aa18.45■□□□□ 0.54
LINC01220-201ENST00000558575 TNPO2O14787 897 aaKnown RBP18.44■□□□□ 0.54
LINC01220-201ENST00000558575 CDC45O75419 566 aa18.44■□□□□ 0.54
LINC01220-201ENST00000558575 AKR1B1P15121 316 aa18.44■□□□□ 0.54
LINC01220-201ENST00000558575 RASA1P20936 1047 aa18.44■□□□□ 0.54
LINC01220-201ENST00000558575 FAM161BQ96MY7 647 aa18.44■□□□□ 0.54
LINC01220-201ENST00000558575 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.44■□□□□ 0.54
LINC01220-201ENST00000558575 LOC285556D6RIA3 1793 aa18.44■□□□□ 0.54
LINC01220-201ENST00000558575 ATAD5Q96QE3 1844 aa18.44■□□□□ 0.54
LINC01220-201ENST00000558575 PRDM1O75626 825 aa18.43■□□□□ 0.54
LINC01220-201ENST00000558575 ASNSP08243 561 aa18.43■□□□□ 0.54
LINC01220-201ENST00000558575 FGRP09769 529 aa18.43■□□□□ 0.54
LINC01220-201ENST00000558575 HAND2P61296 217 aa18.43■□□□□ 0.54
LINC01220-201ENST00000558575 ABCB5Q2M3G0 1257 aa18.43■□□□□ 0.54
LINC01220-201ENST00000558575 FAM109BQ6ICB4 259 aaPredicted RBP18.43■□□□□ 0.54
LINC01220-201ENST00000558575 LSG1Q9H089 658 aaKnown RBP18.43■□□□□ 0.54
LINC01220-201ENST00000558575 GINM1Q9NU53 330 aa18.43■□□□□ 0.54
LINC01220-201ENST00000558575 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.43■□□□□ 0.54
LINC01220-201ENST00000558575 USP17L5A8MUK1 530 aa18.42■□□□□ 0.54
LINC01220-201ENST00000558575 SEPT2Q15019 361 aa18.42■□□□□ 0.54
LINC01220-201ENST00000558575 SIAH1Q8IUQ4 282 aa18.42■□□□□ 0.54
LINC01220-201ENST00000558575 MAP4K1Q92918 833 aa18.42■□□□□ 0.54
LINC01220-201ENST00000558575 WDR18Q9BV38 432 aa18.42■□□□□ 0.54
LINC01220-201ENST00000558575 C11orf49Q9H6J7 331 aa18.42■□□□□ 0.54
LINC01220-201ENST00000558575 PFASO15067 1338 aa18.42■□□□□ 0.54
LINC01220-201ENST00000558575 CXCL11O14625 94 aa18.41■□□□□ 0.54
LINC01220-201ENST00000558575 TRIM32Q13049 653 aa18.41■□□□□ 0.54
LINC01220-201ENST00000558575 SPP2Q13103 211 aa18.41■□□□□ 0.54
LINC01220-201ENST00000558575 TBC1D10CQ8IV04 446 aa18.41■□□□□ 0.54
LINC01220-201ENST00000558575 CCDC17Q96LX7 622 aa18.41■□□□□ 0.54
LINC01220-201ENST00000558575 MKNK2Q9HBH9 465 aa18.41■□□□□ 0.54
LINC01220-201ENST00000558575 DNAH12Q6ZR08 3092 aa18.41■□□□□ 0.54
LINC01220-201ENST00000558575 MUC3AQ02505 3323 aa18.41■□□□□ 0.54
LINC01220-201ENST00000558575 CDH23Q9H251 3354 aa18.41■□□□□ 0.54
LINC01220-201ENST00000558575 A0A0G2JLL6 359 aaPredicted RBP18.4■□□□□ 0.54
LINC01220-201ENST00000558575 PRRT2Q7Z6L0 340 aaPredicted RBP18.4■□□□□ 0.54
LINC01220-201ENST00000558575 ZNF280CQ8ND82 737 aa18.4■□□□□ 0.54
LINC01220-201ENST00000558575 ACER1Q8TDN7 264 aa18.4■□□□□ 0.54
LINC01220-201ENST00000558575 CABP5Q9NP86 173 aa18.4■□□□□ 0.54
LINC01220-201ENST00000558575 TRIM75PA6NK02 468 aa18.39■□□□□ 0.53
LINC01220-201ENST00000558575 MPHOSPH10O00566 681 aaKnown RBP18.39■□□□□ 0.53
LINC01220-201ENST00000558575 RAB3GAP1Q15042 981 aa18.39■□□□□ 0.53
LINC01220-201ENST00000558575 TMEM179Q6ZVK1 233 aa18.39■□□□□ 0.53
LINC01220-201ENST00000558575 CLEC10AQ8IUN9 316 aa18.39■□□□□ 0.53
LINC01220-201ENST00000558575 TAF6LQ9Y6J9 622 aa18.39■□□□□ 0.53
LINC01220-201ENST00000558575 NCOR1O75376 2440 aa18.38■□□□□ 0.53
LINC01220-201ENST00000558575 IGKV6D-41A0A0C4DH26 115 aa18.38■□□□□ 0.53
LINC01220-201ENST00000558575 A0A1W2PRG0 241 aa18.38■□□□□ 0.53
LINC01220-201ENST00000558575 ZNF213O14771 459 aa18.38■□□□□ 0.53
LINC01220-201ENST00000558575 ORC4O43929 436 aa18.38■□□□□ 0.53
LINC01220-201ENST00000558575 HMGCRP04035 888 aa18.38■□□□□ 0.53
LINC01220-201ENST00000558575 SLC3A2P08195 630 aaKnown RBP18.38■□□□□ 0.53
LINC01220-201ENST00000558575 COL9A1P20849 921 aa18.38■□□□□ 0.53
LINC01220-201ENST00000558575 MDM2Q00987 491 aaPredicted RBP18.38■□□□□ 0.53
LINC01220-201ENST00000558575 PDE4BQ07343 736 aa18.38■□□□□ 0.53
LINC01220-201ENST00000558575 FAM47AQ5JRC9 791 aa18.38■□□□□ 0.53
LINC01220-201ENST00000558575 GADL1Q6ZQY3 521 aa18.38■□□□□ 0.53
LINC01220-201ENST00000558575 ZNF444Q8N0Y2 327 aaPredicted RBP18.38■□□□□ 0.53
LINC01220-201ENST00000558575 RAPGEFL1Q9UHV5 662 aa18.38■□□□□ 0.53
LINC01220-201ENST00000558575 CTNNA3Q9UI47 895 aa18.38■□□□□ 0.53
LINC01220-201ENST00000558575 U3KPZ7 1027 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms