RNA–Protein interactions for RNA: ENST00000558509.5

IDH3A-205, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 4

Gene IDH3A, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-205ENST00000558509 PDE3AQ14432 1141 aa18■□□□□ 0.47
IDH3A-205ENST00000558509 TMED8Q6PL24 325 aaPredicted RBP18■□□□□ 0.47
IDH3A-205ENST00000558509 LBX2Q6XYB7 198 aa18■□□□□ 0.47
IDH3A-205ENST00000558509 GTF3C2Q8WUA4 911 aaPredicted RBP18■□□□□ 0.47
IDH3A-205ENST00000558509 C11orf49Q9H6J7 331 aa18■□□□□ 0.47
IDH3A-205ENST00000558509 MPHOSPH10O00566 681 aaKnown RBP17.99■□□□□ 0.47
IDH3A-205ENST00000558509 COL6A1P12109 1028 aa17.99■□□□□ 0.47
IDH3A-205ENST00000558509 USP14P54578 494 aa17.99■□□□□ 0.47
IDH3A-205ENST00000558509 TRPV1Q8NER1 839 aa17.99■□□□□ 0.47
IDH3A-205ENST00000558509 LRCH3Q96II8 777 aa17.99■□□□□ 0.47
IDH3A-205ENST00000558509 HAUS7Q99871 368 aa17.99■□□□□ 0.47
IDH3A-205ENST00000558509 NBPF3Q9H094 633 aa17.99■□□□□ 0.47
IDH3A-205ENST00000558509 CABP5Q9NP86 173 aa17.99■□□□□ 0.47
IDH3A-205ENST00000558509 RCAN3Q9UKA8 241 aa17.99■□□□□ 0.47
IDH3A-205ENST00000558509 PLXNA1Q9UIW2 1896 aa17.99■□□□□ 0.47
IDH3A-205ENST00000558509 RAB11FIP3O75154 756 aa17.98■□□□□ 0.47
IDH3A-205ENST00000558509 HMMRO75330 724 aa17.98■□□□□ 0.47
IDH3A-205ENST00000558509 IGHA2P01877 340 aa17.98■□□□□ 0.47
IDH3A-205ENST00000558509 ATP5JP18859 108 aa17.98■□□□□ 0.47
IDH3A-205ENST00000558509 PTPREP23469 700 aa17.98■□□□□ 0.47
IDH3A-205ENST00000558509 WDR78Q5VTH9 848 aa17.98■□□□□ 0.47
IDH3A-205ENST00000558509 GDF15Q99988 308 aa17.98■□□□□ 0.47
IDH3A-205ENST00000558509 LTBP2Q14767 1821 aa17.98■□□□□ 0.47
IDH3A-205ENST00000558509 MS4A1P11836 297 aa17.97■□□□□ 0.47
IDH3A-205ENST00000558509 GRB14Q14449 540 aa17.97■□□□□ 0.47
IDH3A-205ENST00000558509 MOV10L1Q9BXT6 1211 aaKnown RBP17.97■□□□□ 0.47
IDH3A-205ENST00000558509 SLC15A5A6NIM6 579 aa17.96■□□□□ 0.47
IDH3A-205ENST00000558509 CAPN2P17655 700 aa17.96■□□□□ 0.47
IDH3A-205ENST00000558509 CYP2C19P33261 490 aa17.96■□□□□ 0.47
IDH3A-205ENST00000558509 LRRC26Q2I0M4 334 aa17.96■□□□□ 0.47
IDH3A-205ENST00000558509 TSHZ3Q63HK5 1081 aa17.96■□□□□ 0.47
IDH3A-205ENST00000558509 CCAR1Q8IX12 1150 aaKnown RBP17.96■□□□□ 0.47
IDH3A-205ENST00000558509 SPICE1Q8N0Z3 855 aa17.96■□□□□ 0.47
IDH3A-205ENST00000558509 PUS7LQ9H0K6 701 aaKnown RBP17.96■□□□□ 0.47
IDH3A-205ENST00000558509 MYH4Q9Y623 1939 aa17.96■□□□□ 0.47
IDH3A-205ENST00000558509 USP17L12C9JPN9 530 aa17.95■□□□□ 0.46
IDH3A-205ENST00000558509 USP17L21D6R901 530 aa17.95■□□□□ 0.46
IDH3A-205ENST00000558509 MAGEA10P43363 369 aaPredicted RBP17.95■□□□□ 0.46
IDH3A-205ENST00000558509 C12orf60Q5U649 245 aa17.95■□□□□ 0.46
IDH3A-205ENST00000558509 TMEM179Q6ZVK1 233 aa17.95■□□□□ 0.46
IDH3A-205ENST00000558509 TRMT44Q8IYL2 757 aaKnown RBP17.95■□□□□ 0.46
IDH3A-205ENST00000558509 ATG4CQ96DT6 458 aa17.95■□□□□ 0.46
IDH3A-205ENST00000558509 TANGO6Q9C0B7 1094 aa17.95■□□□□ 0.46
IDH3A-205ENST00000558509 CWC22Q9HCG8 908 aaKnown RBP17.95■□□□□ 0.46
IDH3A-205ENST00000558509 COL6A3P12111 3177 aa17.95■□□□□ 0.46
IDH3A-205ENST00000558509 HOXC6P09630 235 aa17.94■□□□□ 0.46
IDH3A-205ENST00000558509 CDK8P49336 464 aa17.94■□□□□ 0.46
IDH3A-205ENST00000558509 CCNA1P78396 465 aa17.94■□□□□ 0.46
IDH3A-205ENST00000558509 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.94■□□□□ 0.46
IDH3A-205ENST00000558509 SMCHD1A6NHR9 2005 aa17.94■□□□□ 0.46
IDH3A-205ENST00000558509 COBLO75128 1261 aa17.93■□□□□ 0.46
IDH3A-205ENST00000558509 ERCC3P19447 782 aa17.93■□□□□ 0.46
IDH3A-205ENST00000558509 ADORA2AP29274 412 aa17.93■□□□□ 0.46
IDH3A-205ENST00000558509 DSG3P32926 999 aa17.93■□□□□ 0.46
IDH3A-205ENST00000558509 ICA1Q05084 483 aa17.93■□□□□ 0.46
IDH3A-205ENST00000558509 COG2Q14746 738 aa17.93■□□□□ 0.46
IDH3A-205ENST00000558509 UBE3CQ15386 1083 aa17.93■□□□□ 0.46
IDH3A-205ENST00000558509 C16orf86Q6ZW13 317 aa17.93■□□□□ 0.46
IDH3A-205ENST00000558509 LRRCC1Q9C099 1032 aa17.93■□□□□ 0.46
IDH3A-205ENST00000558509 SPATC1LQ9H0A9 340 aa17.93■□□□□ 0.46
IDH3A-205ENST00000558509 FBXO28Q9NVF7 368 aa17.93■□□□□ 0.46
IDH3A-205ENST00000558509 SWAP70Q9UH65 585 aa17.93■□□□□ 0.46
IDH3A-205ENST00000558509 TMX2Q9Y320 296 aa17.93■□□□□ 0.46
IDH3A-205ENST00000558509 CYBAP13498 195 aa17.92■□□□□ 0.46
IDH3A-205ENST00000558509 ANO1Q5XXA6 986 aa17.92■□□□□ 0.46
IDH3A-205ENST00000558509 CTR9Q6PD62 1173 aa17.92■□□□□ 0.46
IDH3A-205ENST00000558509 VCPKMTQ9H867 229 aa17.92■□□□□ 0.46
IDH3A-205ENST00000558509 ATP8A2Q9NTI2 1148 aa17.92■□□□□ 0.46
IDH3A-205ENST00000558509 SLC4A4Q9Y6R1 1079 aa17.92■□□□□ 0.46
IDH3A-205ENST00000558509 A0A1W2PPC1 479 aa17.91■□□□□ 0.46
IDH3A-205ENST00000558509 EEF2P13639 858 aaKnown RBP17.91■□□□□ 0.46
IDH3A-205ENST00000558509 MFSD14CQ5VZR4 134 aa17.91■□□□□ 0.46
IDH3A-205ENST00000558509 SAMD1Q6SPF0 538 aaPredicted RBP17.91■□□□□ 0.46
IDH3A-205ENST00000558509 EPB41L4AQ9HCS5 686 aaPredicted RBP17.91■□□□□ 0.46
IDH3A-205ENST00000558509 DDX20Q9UHI6 824 aaKnown RBP17.91■□□□□ 0.46
IDH3A-205ENST00000558509 FLOT1O75955 427 aa17.9■□□□□ 0.46
IDH3A-205ENST00000558509 GLRX3O76003 335 aaKnown RBP17.9■□□□□ 0.46
IDH3A-205ENST00000558509 BMP8BP34820 402 aa17.9■□□□□ 0.46
IDH3A-205ENST00000558509 ATP2B2Q01814 1243 aa17.9■□□□□ 0.46
IDH3A-205ENST00000558509 TMEM132BQ14DG7 1078 aa17.9■□□□□ 0.46
IDH3A-205ENST00000558509 STK11IPQ8N1F8 1099 aa17.9■□□□□ 0.46
IDH3A-205ENST00000558509 OSBP2Q969R2 916 aa17.9■□□□□ 0.46
IDH3A-205ENST00000558509 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.9■□□□□ 0.46
IDH3A-205ENST00000558509 IVNS1ABPQ9Y6Y0 642 aa17.9■□□□□ 0.46
IDH3A-205ENST00000558509 GSG1L2A8MUP6 293 aa17.89■□□□□ 0.45
IDH3A-205ENST00000558509 CNGA1P29973 690 aa17.89■□□□□ 0.45
IDH3A-205ENST00000558509 PRAMEF19Q5SWL8 479 aa17.89■□□□□ 0.45
IDH3A-205ENST00000558509 SHCBP1Q8NEM2 672 aa17.89■□□□□ 0.45
IDH3A-205ENST00000558509 STRBPQ96SI9 672 aaKnown RBP17.89■□□□□ 0.45
IDH3A-205ENST00000558509 ARHGEF10LQ9HCE6 1279 aa17.89■□□□□ 0.45
IDH3A-205ENST00000558509 MCM3APO60318 1980 aa17.89■□□□□ 0.45
IDH3A-205ENST00000558509 ATN1P54259 1190 aaPredicted RBP17.88■□□□□ 0.45
IDH3A-205ENST00000558509 PLS1Q14651 629 aa17.88■□□□□ 0.45
IDH3A-205ENST00000558509 OLFML2BQ68BL8 750 aa17.88■□□□□ 0.45
IDH3A-205ENST00000558509 NCAPG2Q86XI2 1143 aa17.88■□□□□ 0.45
IDH3A-205ENST00000558509 REPS2Q8NFH8 660 aa17.88■□□□□ 0.45
IDH3A-205ENST00000558509 OTUD7AQ8TE49 926 aaPredicted RBP17.88■□□□□ 0.45
IDH3A-205ENST00000558509 LPAR1Q92633 364 aa17.88■□□□□ 0.45
IDH3A-205ENST00000558509 NUP88Q99567 741 aaPredicted RBP17.88■□□□□ 0.45
IDH3A-205ENST00000558509 SENP6Q9GZR1 1112 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms