RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 CTSBP07858 339 aa3.72□□□□□ -1.81
SLIRP-208ENST00000556956 RLBP1P12271 317 aa3.72□□□□□ -1.81
SLIRP-208ENST00000556956 ERCC3P19447 782 aa3.72□□□□□ -1.81
SLIRP-208ENST00000556956 EIF4BP23588 611 aaKnown RBP3.72□□□□□ -1.81
SLIRP-208ENST00000556956 GNA15P30679 374 aa3.72□□□□□ -1.81
SLIRP-208ENST00000556956 RALBP1Q15311 655 aa3.72□□□□□ -1.81
SLIRP-208ENST00000556956 GLIPR1L2Q4G1C9 344 aa3.72□□□□□ -1.81
SLIRP-208ENST00000556956 EAPPQ56P03 285 aaPredicted RBP3.72□□□□□ -1.81
SLIRP-208ENST00000556956 ZC3H12AQ5D1E8 599 aaKnown RBP3.72□□□□□ -1.81
SLIRP-208ENST00000556956 ARHGAP27Q6ZUM4 889 aa3.72□□□□□ -1.81
SLIRP-208ENST00000556956 SND1Q7KZF4 910 aaKnown RBP eCLIP3.72□□□□□ -1.811e-12■■□□□ 11.5
SLIRP-208ENST00000556956 SV2BQ7L1I2 683 aa3.72□□□□□ -1.81
SLIRP-208ENST00000556956 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.72□□□□□ -1.81
SLIRP-208ENST00000556956 FAM43AQ8N2R8 423 aa3.72□□□□□ -1.81
SLIRP-208ENST00000556956 RNF214Q8ND24 703 aa3.72□□□□□ -1.81
SLIRP-208ENST00000556956 C3orf58Q8NDZ4 430 aa3.72□□□□□ -1.81
SLIRP-208ENST00000556956 PNISRQ8TF01 805 aaKnown RBP3.72□□□□□ -1.81
SLIRP-208ENST00000556956 BDH2Q9BUT1 245 aa3.72□□□□□ -1.81
SLIRP-208ENST00000556956 OSBPL7Q9BZF2 842 aa3.72□□□□□ -1.81
SLIRP-208ENST00000556956 C12orf49Q9H741 205 aa3.72□□□□□ -1.81
SLIRP-208ENST00000556956 DISC1Q9NRI5 854 aa3.72□□□□□ -1.81
SLIRP-208ENST00000556956 RRP7BPQ9NSQ0 103 aa3.72□□□□□ -1.81
SLIRP-208ENST00000556956 RCAN3Q9UKA8 241 aa3.72□□□□□ -1.81
SLIRP-208ENST00000556956 ROCK2O75116 1388 aaKnown RBP3.72□□□□□ -1.81
SLIRP-208ENST00000556956 KTN1Q86UP2 1357 aaKnown RBP3.72□□□□□ -1.81
SLIRP-208ENST00000556956 THOC2Q8NI27 1593 aaKnown RBP3.72□□□□□ -1.81
SLIRP-208ENST00000556956 PTPRKQ15262 1439 aa3.71□□□□□ -1.82
SLIRP-208ENST00000556956 MYOM3Q5VTT5 1437 aa3.71□□□□□ -1.82
SLIRP-208ENST00000556956 EFCAB5A4FU69 1503 aa3.71□□□□□ -1.82
SLIRP-208ENST00000556956 ABCA5Q8WWZ7 1642 aa3.71□□□□□ -1.82
SLIRP-208ENST00000556956 FANCGO15287 622 aa3.71□□□□□ -1.82
SLIRP-208ENST00000556956 ZNF862O60290 1169 aa3.71□□□□□ -1.82
SLIRP-208ENST00000556956 EIF5BO60841 1220 aaKnown RBP3.71□□□□□ -1.82
SLIRP-208ENST00000556956 DLG4P78352 724 aa3.71□□□□□ -1.82
SLIRP-208ENST00000556956 ZNF252P-AS1Q0IIN9 211 aa3.71□□□□□ -1.82
SLIRP-208ENST00000556956 TTLL4Q14679 1199 aa3.71□□□□□ -1.82
SLIRP-208ENST00000556956 LLGL2Q6P1M3 1020 aa3.71□□□□□ -1.82
SLIRP-208ENST00000556956 TPTE2Q6XPS3 522 aa3.71□□□□□ -1.82
SLIRP-208ENST00000556956 PDZD3Q86UT5 571 aa3.71□□□□□ -1.82
SLIRP-208ENST00000556956 SYT8Q8NBV8 401 aa3.71□□□□□ -1.82
SLIRP-208ENST00000556956 EXOC6Q8TAG9 804 aa3.71□□□□□ -1.82
SLIRP-208ENST00000556956 WDR89Q96FK6 387 aaPredicted RBP3.71□□□□□ -1.82
SLIRP-208ENST00000556956 CNOT6Q9ULM6 557 aaKnown RBP3.71□□□□□ -1.82
SLIRP-208ENST00000556956 AK5Q9Y6K8 562 aa3.71□□□□□ -1.82
SLIRP-208ENST00000556956 FHOD3Q2V2M9 1422 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 AKNAQ7Z591 1439 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 KDM5BQ9UGL1 1544 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 PTPN23Q9H3S7 1636 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 ANKRD33BA6NCL7 494 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 ENC1O14682 589 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 P4HBP07237 508 aaKnown RBP3.7□□□□□ -1.82
SLIRP-208ENST00000556956 HCLS1P14317 486 aaPredicted RBP3.7□□□□□ -1.82
SLIRP-208ENST00000556956 BMP6P22004 513 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 GDNFP39905 211 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 RGS19P49795 217 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 XPCQ01831 940 aaPredicted RBP3.7□□□□□ -1.82
SLIRP-208ENST00000556956 NBPF8Q3BBV2 869 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 L1TD1Q5T7N2 865 aaKnown RBP3.7□□□□□ -1.82
SLIRP-208ENST00000556956 KRTAP5-11Q6L8G4 156 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 HDXQ7Z353 690 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 ZNF507Q8TCN5 953 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 GPBAR1Q8TDU6 330 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 NAF1Q96HR8 494 aaKnown RBP3.7□□□□□ -1.82
SLIRP-208ENST00000556956 TEPSINQ96N21 525 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 GTF2IRD1Q9UHL9 959 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 WWC3Q9ULE0 1092 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 PCDHA4Q9UN74 947 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 TTF2Q9UNY4 1162 aaKnown RBP3.7□□□□□ -1.82
SLIRP-208ENST00000556956 KCTD3Q9Y597 815 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 BRD4O60885 1362 aaPredicted RBP3.7□□□□□ -1.82
SLIRP-208ENST00000556956 KIF15Q9NS87 1388 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 CADPSQ9ULU8 1353 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 FANCD2Q9BXW9 1451 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 NESP48681 1621 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 TOPBP1Q92547 1522 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 SPATA31E1Q6ZUB1 1445 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 MIA2Q96PC5 1412 aa3.7□□□□□ -1.82
SLIRP-208ENST00000556956 MYBBP1AQ9BQG0 1328 aaKnown RBP3.7□□□□□ -1.82
SLIRP-208ENST00000556956 CFAP43Q8NDM7 1665 aa3.69□□□□□ -1.82
SLIRP-208ENST00000556956 DHX29Q7Z478 1369 aaKnown RBP3.69□□□□□ -1.82
SLIRP-208ENST00000556956 ANKRD30BQ9BXX2 1392 aa3.69□□□□□ -1.82
SLIRP-208ENST00000556956 USP17L7P0C7H9 530 aa3.69□□□□□ -1.82
SLIRP-208ENST00000556956 RPS26P62854 115 aaKnown RBP3.69□□□□□ -1.82
SLIRP-208ENST00000556956 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.69□□□□□ -1.82
SLIRP-208ENST00000556956 ASB11Q8WXH4 323 aa3.69□□□□□ -1.82
SLIRP-208ENST00000556956 FRAT1Q92837 279 aaPredicted RBP3.69□□□□□ -1.82
SLIRP-208ENST00000556956 ELMO3Q96BJ8 720 aa3.69□□□□□ -1.82
SLIRP-208ENST00000556956 POLR3GLQ9BT43 218 aa3.69□□□□□ -1.82
SLIRP-208ENST00000556956 MCOLN1Q9GZU1 580 aa3.69□□□□□ -1.82
SLIRP-208ENST00000556956 CACNA2D2Q9NY47 1150 aa3.69□□□□□ -1.82
SLIRP-208ENST00000556956 PCDHGC5Q9Y5F6 944 aa3.69□□□□□ -1.82
SLIRP-208ENST00000556956 SNX11Q9Y5W9 270 aa3.69□□□□□ -1.82
SLIRP-208ENST00000556956 SNCAIPQ9Y6H5 919 aa3.69□□□□□ -1.82
SLIRP-208ENST00000556956 TARBP1Q13395 1621 aaKnown RBP3.69□□□□□ -1.82
SLIRP-208ENST00000556956 WDR62O43379 1518 aa3.69□□□□□ -1.82
SLIRP-208ENST00000556956 PCF11O94913 1555 aaKnown RBP3.68□□□□□ -1.82
SLIRP-208ENST00000556956 TCOF1Q13428 1488 aaKnown RBP3.68□□□□□ -1.82
SLIRP-208ENST00000556956 INSRP06213 1382 aa3.68□□□□□ -1.82
SLIRP-208ENST00000556956 LRPPRCP42704 1394 aaKnown RBP3.68□□□□□ -1.82
SLIRP-208ENST00000556956 ROCK1Q13464 1354 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms