RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 DEXIO95424 95 aa16.03■□□□□ 0.16
EFCAB11-212ENST00000556639 TOP1P11387 765 aaKnown RBP16.03■□□□□ 0.16
EFCAB11-212ENST00000556639 NT5C2P49902 561 aa16.03■□□□□ 0.16
EFCAB11-212ENST00000556639 MIGA2Q7L4E1 593 aa16.03■□□□□ 0.16
EFCAB11-212ENST00000556639 METTL16Q86W50 562 aaKnown RBP16.03■□□□□ 0.16
EFCAB11-212ENST00000556639 RNF26Q9BY78 433 aaPredicted RBP16.03■□□□□ 0.16
EFCAB11-212ENST00000556639 ZSCAN16Q9H4T2 348 aaPredicted RBP16.03■□□□□ 0.16
EFCAB11-212ENST00000556639 RPS12P25398 132 aaKnown RBP16.02■□□□□ 0.16
EFCAB11-212ENST00000556639 KIF23Q02241 960 aaPredicted RBP16.02■□□□□ 0.16
EFCAB11-212ENST00000556639 PPP2R5BQ15173 497 aa16.02■□□□□ 0.16
EFCAB11-212ENST00000556639 TRIM34Q9BYJ4 488 aa16.02■□□□□ 0.16
EFCAB11-212ENST00000556639 VPS54Q9P1Q0 977 aa16.02■□□□□ 0.16
EFCAB11-212ENST00000556639 PRPF3O43395 683 aaKnown RBP16.02■□□□□ 0.15
EFCAB11-212ENST00000556639 CYTH3O43739 400 aa16.02■□□□□ 0.15
EFCAB11-212ENST00000556639 SEPT2Q15019 361 aa16.02■□□□□ 0.15
EFCAB11-212ENST00000556639 RBM27Q9P2N5 1060 aaKnown RBP16.02■□□□□ 0.15
EFCAB11-212ENST00000556639 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.02■□□□□ 0.15
EFCAB11-212ENST00000556639 PGAP2Q9UHJ9 254 aa16.02■□□□□ 0.15
EFCAB11-212ENST00000556639 GREB1LQ9C091 1923 aaPredicted RBP16.01■□□□□ 0.15
EFCAB11-212ENST00000556639 PALM3A6NDB9 673 aaPredicted RBP16.01■□□□□ 0.15
EFCAB11-212ENST00000556639 MYO1BO43795 1136 aa16.01■□□□□ 0.15
EFCAB11-212ENST00000556639 KRT85P78386 507 aa16.01■□□□□ 0.15
EFCAB11-212ENST00000556639 SIAH1Q8IUQ4 282 aa16.01■□□□□ 0.15
EFCAB11-212ENST00000556639 DPF2Q92785 391 aa16.01■□□□□ 0.15
EFCAB11-212ENST00000556639 FRMPD2Q68DX3 1309 aaPredicted RBP16.01■□□□□ 0.15
EFCAB11-212ENST00000556639 RASA3Q14644 834 aa16.01■□□□□ 0.15
EFCAB11-212ENST00000556639 TRPM4Q8TD43 1214 aa16.01■□□□□ 0.15
EFCAB11-212ENST00000556639 USP28Q96RU2 1077 aa16.01■□□□□ 0.15
EFCAB11-212ENST00000556639 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.01■□□□□ 0.15
EFCAB11-212ENST00000556639 ADAMTS3O15072 1205 aa16■□□□□ 0.15
EFCAB11-212ENST00000556639 TTLL1O95922 423 aa16■□□□□ 0.15
EFCAB11-212ENST00000556639 KIF5BP33176 963 aa16■□□□□ 0.15
EFCAB11-212ENST00000556639 AKAP17AQ02040 695 aaKnown RBP16■□□□□ 0.15
EFCAB11-212ENST00000556639 TMEM87AQ8NBN3 555 aa16■□□□□ 0.15
EFCAB11-212ENST00000556639 OXER1Q8TDS5 423 aa16■□□□□ 0.15
EFCAB11-212ENST00000556639 CCDC17Q96LX7 622 aa16■□□□□ 0.15
EFCAB11-212ENST00000556639 UBA5Q9GZZ9 404 aa16■□□□□ 0.15
EFCAB11-212ENST00000556639 DICER1Q9UPY3 1922 aaKnown RBP16■□□□□ 0.15
EFCAB11-212ENST00000556639 MYH15Q9Y2K3 1946 aa16■□□□□ 0.15
EFCAB11-212ENST00000556639 BTBD18B2RXH4 712 aa16■□□□□ 0.15
EFCAB11-212ENST00000556639 DDNO94850 711 aaPredicted RBP16■□□□□ 0.15
EFCAB11-212ENST00000556639 GH2P01242 217 aa16■□□□□ 0.15
EFCAB11-212ENST00000556639 PDHBP11177 359 aa16■□□□□ 0.15
EFCAB11-212ENST00000556639 EEF2P13639 858 aaKnown RBP16■□□□□ 0.15
EFCAB11-212ENST00000556639 EPS15P42566 896 aa16■□□□□ 0.15
EFCAB11-212ENST00000556639 ABCB5Q2M3G0 1257 aa16■□□□□ 0.15
EFCAB11-212ENST00000556639 LEO1Q8WVC0 666 aaPredicted RBP16■□□□□ 0.15
EFCAB11-212ENST00000556639 RNF181Q9P0P0 153 aa16■□□□□ 0.15
EFCAB11-212ENST00000556639 HACL1Q9UJ83 578 aa16■□□□□ 0.15
EFCAB11-212ENST00000556639 COL2A1P02458 1487 aaPredicted RBP15.99■□□□□ 0.15
EFCAB11-212ENST00000556639 MYH4Q9Y623 1939 aa15.99■□□□□ 0.15
EFCAB11-212ENST00000556639 KLRF2D3W0D1 207 aa15.99■□□□□ 0.15
EFCAB11-212ENST00000556639 MMP1P03956 469 aa15.99■□□□□ 0.15
EFCAB11-212ENST00000556639 TRIM29Q14134 588 aa15.99■□□□□ 0.15
EFCAB11-212ENST00000556639 KLHL40Q2TBA0 621 aa15.99■□□□□ 0.15
EFCAB11-212ENST00000556639 KIF4BQ2VIQ3 1234 aa15.99■□□□□ 0.15
EFCAB11-212ENST00000556639 FKBP1CQ5VVH2 108 aa15.99■□□□□ 0.15
EFCAB11-212ENST00000556639 WASF1Q92558 559 aa15.99■□□□□ 0.15
EFCAB11-212ENST00000556639 MAP3K14Q99558 947 aa15.99■□□□□ 0.15
EFCAB11-212ENST00000556639 PARP1P09874 1014 aaKnown RBP15.99■□□□□ 0.15
EFCAB11-212ENST00000556639 NR5A1Q13285 461 aa15.99■□□□□ 0.15
EFCAB11-212ENST00000556639 SKOR2Q2VWA4 1001 aaPredicted RBP15.99■□□□□ 0.15
EFCAB11-212ENST00000556639 CAVIN1Q6NZI2 390 aaKnown RBP15.99■□□□□ 0.15
EFCAB11-212ENST00000556639 FAM83AQ86UY5 434 aa15.99■□□□□ 0.15
EFCAB11-212ENST00000556639 GPKOWQ92917 476 aaPredicted RBP eCLIP15.99■□□□□ 0.15
EFCAB11-212ENST00000556639 VAT1LQ9HCJ6 419 aa15.99■□□□□ 0.15
EFCAB11-212ENST00000556639 RAD21O60216 631 aa15.98■□□□□ 0.15
EFCAB11-212ENST00000556639 PTMSP20962 102 aa15.98■□□□□ 0.15
EFCAB11-212ENST00000556639 PRAMEF18Q5VWM3 479 aa15.98■□□□□ 0.15
EFCAB11-212ENST00000556639 DIS3L2Q8IYB7 885 aaKnown RBP15.98■□□□□ 0.15
EFCAB11-212ENST00000556639 SPATA32Q96LK8 384 aa15.98■□□□□ 0.15
EFCAB11-212ENST00000556639 TEPSINQ96N21 525 aa15.98■□□□□ 0.15
EFCAB11-212ENST00000556639 GPCPD1Q9NPB8 672 aa15.98■□□□□ 0.15
EFCAB11-212ENST00000556639 GPRC5DQ9NZD1 345 aa15.98■□□□□ 0.15
EFCAB11-212ENST00000556639 HIRAP54198 1017 aaPredicted RBP15.97■□□□□ 0.15
EFCAB11-212ENST00000556639 MYSM1Q5VVJ2 828 aa15.97■□□□□ 0.15
EFCAB11-212ENST00000556639 TTBK2Q6IQ55 1244 aa15.97■□□□□ 0.15
EFCAB11-212ENST00000556639 CLIC4Q9Y696 253 aa15.97■□□□□ 0.15
EFCAB11-212ENST00000556639 SCG2P13521 617 aa15.97■□□□□ 0.15
EFCAB11-212ENST00000556639 NOM1Q5C9Z4 860 aaKnown RBP15.97■□□□□ 0.15
EFCAB11-212ENST00000556639 TYW1BQ6NUM6 668 aa15.97■□□□□ 0.15
EFCAB11-212ENST00000556639 KCTD1Q719H9 257 aa15.97■□□□□ 0.15
EFCAB11-212ENST00000556639 CCDC84Q86UT8 332 aaPredicted RBP15.97■□□□□ 0.15
EFCAB11-212ENST00000556639 GPC2Q8N158 579 aa15.97■□□□□ 0.15
EFCAB11-212ENST00000556639 PGBD1Q96JS3 809 aa15.97■□□□□ 0.15
EFCAB11-212ENST00000556639 HERC5Q9UII4 1024 aaKnown RBP15.97■□□□□ 0.15
EFCAB11-212ENST00000556639 FAM205CA6NFA0 338 aa15.96■□□□□ 0.15
EFCAB11-212ENST00000556639 H7C1D1 291 aa15.96■□□□□ 0.15
EFCAB11-212ENST00000556639 U2AF2P26368 475 aaKnown RBP eCLIP15.96■□□□□ 0.15
EFCAB11-212ENST00000556639 ICA1Q05084 483 aa15.96■□□□□ 0.15
EFCAB11-212ENST00000556639 NPY5RQ15761 445 aa15.96■□□□□ 0.15
EFCAB11-212ENST00000556639 PFKFB3Q16875 520 aaPredicted RBP15.96■□□□□ 0.15
EFCAB11-212ENST00000556639 EARS2Q5JPH6 523 aaKnown RBP15.96■□□□□ 0.15
EFCAB11-212ENST00000556639 C9orf131Q5VYM1 1079 aa15.96■□□□□ 0.15
EFCAB11-212ENST00000556639 TMEM179Q6ZVK1 233 aa15.96■□□□□ 0.15
EFCAB11-212ENST00000556639 KANSL2Q9H9L4 492 aa15.96■□□□□ 0.15
EFCAB11-212ENST00000556639 TMEM63CQ9P1W3 806 aa15.96■□□□□ 0.15
EFCAB11-212ENST00000556639 A0A1W2PRG0 241 aa15.96■□□□□ 0.15
EFCAB11-212ENST00000556639 SNHG28P0DPA3 235 aa15.96■□□□□ 0.15
EFCAB11-212ENST00000556639 GNL2Q13823 731 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms