RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 MINDY4BA8MYZ0 360 aa11.52□□□□□ -0.57
SRP54-210ENST00000556380 TBC1D8O95759 1140 aa11.52□□□□□ -0.57
SRP54-210ENST00000556380 AKR1B1P15121 316 aa11.52□□□□□ -0.57
SRP54-210ENST00000556380 TDO2P48775 406 aa11.52□□□□□ -0.57
SRP54-210ENST00000556380 PPP1R15BQ5SWA1 713 aa11.52□□□□□ -0.57
SRP54-210ENST00000556380 OTUD7BQ6GQQ9 843 aa11.52□□□□□ -0.57
SRP54-210ENST00000556380 ANKRD23Q86SG2 305 aa11.52□□□□□ -0.57
SRP54-210ENST00000556380 CCDC17Q96LX7 622 aa11.52□□□□□ -0.57
SRP54-210ENST00000556380 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.52□□□□□ -0.57
SRP54-210ENST00000556380 DIAPH3Q9NSV4 1193 aa11.52□□□□□ -0.57
SRP54-210ENST00000556380 ANAPC4Q9UJX5 808 aa11.52□□□□□ -0.57
SRP54-210ENST00000556380 TACC3Q9Y6A5 838 aa11.52□□□□□ -0.57
SRP54-210ENST00000556380 BAZ2AQ9UIF9 1905 aaKnown RBP11.52□□□□□ -0.57
SRP54-210ENST00000556380 PHIPQ8WWQ0 1821 aa11.51□□□□□ -0.57
SRP54-210ENST00000556380 DOCK1Q14185 1865 aa11.51□□□□□ -0.57
SRP54-210ENST00000556380 FGRP09769 529 aa11.51□□□□□ -0.57
SRP54-210ENST00000556380 RASA1P20936 1047 aa11.51□□□□□ -0.57
SRP54-210ENST00000556380 BACE1P56817 501 aa11.51□□□□□ -0.57
SRP54-210ENST00000556380 PPARAQ07869 468 aa11.51□□□□□ -0.57
SRP54-210ENST00000556380 SEPT2Q15019 361 aa11.51□□□□□ -0.57
SRP54-210ENST00000556380 BMP2KLQ5H9B9 411 aa11.51□□□□□ -0.57
SRP54-210ENST00000556380 FASTKD5Q7L8L6 764 aaKnown RBP11.51□□□□□ -0.57
SRP54-210ENST00000556380 AMOTL1Q8IY63 956 aa11.51□□□□□ -0.57
SRP54-210ENST00000556380 ACER1Q8TDN7 264 aa11.51□□□□□ -0.57
SRP54-210ENST00000556380 NAPBQ9H115 298 aa11.51□□□□□ -0.57
SRP54-210ENST00000556380 ZMYM6O95789 1325 aa11.51□□□□□ -0.57
SRP54-210ENST00000556380 GPR25O00155 361 aa11.5□□□□□ -0.57
SRP54-210ENST00000556380 HMGCS2P54868 508 aa11.5□□□□□ -0.57
SRP54-210ENST00000556380 CRHR2Q13324 411 aa11.5□□□□□ -0.57
SRP54-210ENST00000556380 DGKZQ13574 1117 aa11.5□□□□□ -0.57
SRP54-210ENST00000556380 TMEM179Q6ZVK1 233 aa11.5□□□□□ -0.57
SRP54-210ENST00000556380 PROCA1Q8NCQ7 364 aaPredicted RBP11.5□□□□□ -0.57
SRP54-210ENST00000556380 OXER1Q8TDS5 423 aa11.5□□□□□ -0.57
SRP54-210ENST00000556380 AS3MTQ9HBK9 375 aa11.5□□□□□ -0.57
SRP54-210ENST00000556380 CABP5Q9NP86 173 aa11.5□□□□□ -0.57
SRP54-210ENST00000556380 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.5□□□□□ -0.57
SRP54-210ENST00000556380 SLC45A1Q9Y2W3 748 aa11.5□□□□□ -0.57
SRP54-210ENST00000556380 IGKV6D-41A0A0C4DH26 115 aa11.49□□□□□ -0.57
SRP54-210ENST00000556380 A0A1W2PRG0 241 aa11.49□□□□□ -0.57
SRP54-210ENST00000556380 C19orf81C9J6K1 198 aa11.49□□□□□ -0.57
SRP54-210ENST00000556380 USP17L10C9JJH3 530 aa11.49□□□□□ -0.57
SRP54-210ENST00000556380 PDHXO00330 501 aa11.49□□□□□ -0.57
SRP54-210ENST00000556380 MFAP1P55081 439 aaKnown RBP11.49□□□□□ -0.57
SRP54-210ENST00000556380 MTMR2Q13614 643 aa11.49□□□□□ -0.57
SRP54-210ENST00000556380 RAB3GAP1Q15042 981 aa11.49□□□□□ -0.57
SRP54-210ENST00000556380 TREML2Q5T2D2 321 aa11.49□□□□□ -0.57
SRP54-210ENST00000556380 COL13A1Q5TAT6 717 aaPredicted RBP11.49□□□□□ -0.57
SRP54-210ENST00000556380 C12orf42Q96LP6 360 aa11.49□□□□□ -0.57
SRP54-210ENST00000556380 DSCC1Q9BVC3 393 aa11.49□□□□□ -0.57
SRP54-210ENST00000556380 NBPF3Q9H094 633 aa11.49□□□□□ -0.57
SRP54-210ENST00000556380 KIAA1683Q9H0B3 1180 aa11.49□□□□□ -0.57
SRP54-210ENST00000556380 INCENPQ9NQS7 918 aa11.49□□□□□ -0.57
SRP54-210ENST00000556380 EMILIN3Q9NT22 766 aa11.49□□□□□ -0.57
SRP54-210ENST00000556380 AGTPBP1Q9UPW5 1226 aa11.49□□□□□ -0.57
SRP54-210ENST00000556380 ADGRA2Q96PE1 1338 aa11.49□□□□□ -0.57
SRP54-210ENST00000556380 ARHGAP33O14559 1287 aa11.48□□□□□ -0.57
SRP54-210ENST00000556380 SGSM2O43147 1006 aa11.48□□□□□ -0.57
SRP54-210ENST00000556380 TLR2O60603 784 aa11.48□□□□□ -0.57
SRP54-210ENST00000556380 PRDM1O75626 825 aa11.48□□□□□ -0.57
SRP54-210ENST00000556380 HOXA7P31268 230 aaPredicted RBP11.48□□□□□ -0.57
SRP54-210ENST00000556380 CTDSPL2Q05D32 466 aa11.48□□□□□ -0.57
SRP54-210ENST00000556380 TAF1CQ15572 869 aaPredicted RBP11.48□□□□□ -0.57
SRP54-210ENST00000556380 USP17L2Q6R6M4 530 aa11.48□□□□□ -0.57
SRP54-210ENST00000556380 C17orf99Q6UX52 265 aa11.48□□□□□ -0.57
SRP54-210ENST00000556380 GADL1Q6ZQY3 521 aa11.48□□□□□ -0.57
SRP54-210ENST00000556380 STK11IPQ8N1F8 1099 aa11.48□□□□□ -0.57
SRP54-210ENST00000556380 ZNF296Q8WUU4 475 aaPredicted RBP11.48□□□□□ -0.57
SRP54-210ENST00000556380 MKNK2Q9HBH9 465 aa11.48□□□□□ -0.57
SRP54-210ENST00000556380 ZFYVE28Q9HCC9 887 aa11.48□□□□□ -0.57
SRP54-210ENST00000556380 RAD50Q92878 1312 aa11.48□□□□□ -0.57
SRP54-210ENST00000556380 MPHOSPH10O00566 681 aaKnown RBP11.47□□□□□ -0.57
SRP54-210ENST00000556380 ORC4O43929 436 aa11.47□□□□□ -0.57
SRP54-210ENST00000556380 CYP2C8P10632 490 aa11.47□□□□□ -0.57
SRP54-210ENST00000556380 CAP1Q01518 475 aa11.47□□□□□ -0.57
SRP54-210ENST00000556380 PDE4BQ07343 736 aa11.47□□□□□ -0.57
SRP54-210ENST00000556380 KIAA1755Q5JYT7 1200 aa11.47□□□□□ -0.57
SRP54-210ENST00000556380 CLEC10AQ8IUN9 316 aa11.47□□□□□ -0.57
SRP54-210ENST00000556380 ZNF444Q8N0Y2 327 aaPredicted RBP11.47□□□□□ -0.57
SRP54-210ENST00000556380 NEDD1Q8NHV4 660 aa11.47□□□□□ -0.57
SRP54-210ENST00000556380 NKX2-3Q8TAU0 364 aa11.47□□□□□ -0.57
SRP54-210ENST00000556380 LARP6Q9BRS8 491 aaKnown RBP11.47□□□□□ -0.57
SRP54-210ENST00000556380 KANSL2Q9H9L4 492 aa11.47□□□□□ -0.57
SRP54-210ENST00000556380 ZNF287Q9HBT7 754 aa11.47□□□□□ -0.57
SRP54-210ENST00000556380 TMX2Q9Y320 296 aa11.47□□□□□ -0.57
SRP54-210ENST00000556380 PTPRFP10586 1907 aa11.47□□□□□ -0.57
SRP54-210ENST00000556380 ATAD5Q96QE3 1844 aa11.46□□□□□ -0.57
SRP54-210ENST00000556380 FKTNO75072 461 aa11.46□□□□□ -0.57
SRP54-210ENST00000556380 SLC3A2P08195 630 aaKnown RBP11.46□□□□□ -0.57
SRP54-210ENST00000556380 BCRP11274 1271 aa11.46□□□□□ -0.57
SRP54-210ENST00000556380 EEF2P13639 858 aaKnown RBP11.46□□□□□ -0.57
SRP54-210ENST00000556380 NOVP48745 357 aa11.46□□□□□ -0.57
SRP54-210ENST00000556380 USP14P54578 494 aa11.46□□□□□ -0.57
SRP54-210ENST00000556380 PTH1RQ03431 593 aa11.46□□□□□ -0.57
SRP54-210ENST00000556380 ICA1Q05084 483 aa11.46□□□□□ -0.57
SRP54-210ENST00000556380 RUFY2Q8WXA3 655 aa11.46□□□□□ -0.57
SRP54-210ENST00000556380 MKL1Q969V6 931 aa11.46□□□□□ -0.57
SRP54-210ENST00000556380 TMOD4Q9NZQ9 345 aa11.46□□□□□ -0.57
SRP54-210ENST00000556380 NYAP2Q9P242 653 aa11.46□□□□□ -0.57
SRP54-210ENST00000556380 CASP8AP2Q9UKL3 1982 aa11.45□□□□□ -0.58
SRP54-210ENST00000556380 PLIN4Q96Q06 1357 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms