RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, human

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL1-208	ENST00000556067	CDC14C	A4D256	554 aa		6.59	□□□□□ -1.35
ATL1-208	ENST00000556067		K7ELQ4	463 aa	Predicted RBP	6.59	□□□□□ -1.35
ATL1-208	ENST00000556067	ZBTB7A	O95365	584 aa		6.59	□□□□□ -1.35
ATL1-208	ENST00000556067	LDHB	P07195	334 aa	Known RBP	6.59	□□□□□ -1.35
ATL1-208	ENST00000556067	HMGB1	P09429	215 aa	Known RBP	6.59	□□□□□ -1.35
ATL1-208	ENST00000556067	FGD1	P98174	961 aa		6.59	□□□□□ -1.35
ATL1-208	ENST00000556067	PTH1R	Q03431	593 aa		6.59	□□□□□ -1.35
ATL1-208	ENST00000556067	R3HDM1	Q15032	1099 aa	Known RBP	6.59	□□□□□ -1.35
ATL1-208	ENST00000556067	ANKRD1	Q15327	319 aa		6.59	□□□□□ -1.35
ATL1-208	ENST00000556067	CREB3L3	Q68CJ9	461 aa		6.59	□□□□□ -1.35
ATL1-208	ENST00000556067	CCDC129	Q6ZRS4	1044 aa		6.59	□□□□□ -1.35
ATL1-208	ENST00000556067	CERS3	Q8IU89	383 aa		6.59	□□□□□ -1.35
ATL1-208	ENST00000556067	NPAS3	Q8IXF0	933 aa		6.59	□□□□□ -1.35
ATL1-208	ENST00000556067	TTLL6	Q8N841	843 aa		6.59	□□□□□ -1.35
ATL1-208	ENST00000556067	TBC1D22A	Q8WUA7	517 aa		6.59	□□□□□ -1.35
ATL1-208	ENST00000556067	JAKMIP1	Q96N16	626 aa	Known RBP	6.59	□□□□□ -1.35
ATL1-208	ENST00000556067	SEC62	Q99442	399 aa	Known RBP	6.59	□□□□□ -1.35
ATL1-208	ENST00000556067	GAS2L1	Q99501	681 aa	Predicted RBP	6.59	□□□□□ -1.35
ATL1-208	ENST00000556067	COA1	Q9GZY4	146 aa		6.59	□□□□□ -1.35
ATL1-208	ENST00000556067	TFIP11	Q9UBB9	837 aa	Known RBP	6.59	□□□□□ -1.35
ATL1-208	ENST00000556067	PPP1R1B	Q9UD71	204 aa	Predicted RBP	6.59	□□□□□ -1.35
ATL1-208	ENST00000556067	SNX14	Q9Y5W7	946 aa		6.59	□□□□□ -1.35
ATL1-208	ENST00000556067	AK9	Q5TCS8	1911 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	SLC35F4	A4IF30	521 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	PATL2	C9JE40	543 aa	Known RBP	6.58	□□□□□ -1.36
ATL1-208	ENST00000556067		M0R2C6	588 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	ZNF213	O14771	459 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	SLC27A2	O14975	620 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	GPAA1	O43292	621 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	BAG3	O95817	575 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	HSPD1	P10809	573 aa	Known RBP	6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	CAST	P20810	708 aa	Known RBP	6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	CHRNA5	P30532	468 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	TDO2	P48775	406 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	SCNN1D	P51172	638 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	TGFB2	P61812	414 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	TRDN	Q13061	729 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	NECTIN1	Q15223	517 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	LCE2C	Q5TA81	110 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	BLOC1S2	Q6QNY1	142 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	RIPOR1	Q6ZS17	1223 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	ZNF589	Q86UQ0	364 aa	Predicted RBP	6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	AMOTL1	Q8IY63	956 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	RTKN2	Q8IZC4	609 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	TDRD7	Q8NHU6	1098 aa	Known RBP	6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	OSBP2	Q969R2	916 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	CHMP4C	Q96CF2	233 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	TM6SF1	Q9BZW5	370 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	GRIP2	Q9C0E4	1043 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	ZMYND15	Q9H091	742 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	NAPB	Q9H115	298 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	CD209	Q9NNX6	404 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	PDRG1	Q9NUG6	133 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	PIM2	Q9P1W9	311 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	POLL	Q9UGP5	575 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	WWC3	Q9ULE0	1092 aa		6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	TNRC6C	Q9HCJ0	1690 aa	Known RBP	6.58	□□□□□ -1.36
ATL1-208	ENST00000556067	RPAP1	Q9BWH6	1393 aa	Predicted RBP	6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	SALL1	Q9NSC2	1324 aa		6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	QSER1	Q2KHR3	1735 aa		6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	PALM3	A6NDB9	673 aa	Predicted RBP	6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	WTIP	A6NIX2	430 aa	Predicted RBP	6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	LZTS3	O60299	673 aa	Predicted RBP	6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	MBD4	O95243	580 aa		6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	INHA	P05111	366 aa		6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	SLC3A2	P08195	630 aa	Known RBP	6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	IL1R1	P14778	569 aa		6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	KLRK1	P26718	216 aa		6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	GMPR	P36959	345 aa		6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	CCDC93	Q567U6	631 aa		6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	GNAS	Q5JWF2	1037 aa		6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	VPS53	Q5VIR6	699 aa		6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	RUFY3	Q7L099	469 aa		6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	TAS1R3	Q7RTX0	852 aa		6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	PODN	Q7Z5L7	613 aa		6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	RALYL	Q86SE5	291 aa	Known RBP	6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	KCNB2	Q92953	911 aa		6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	ZSCAN31	Q96LW9	406 aa	Predicted RBP	6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	NEK1	Q96PY6	1258 aa		6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	KIF2C	Q99661	725 aa		6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	CRNKL1	Q9BZJ0	848 aa	Known RBP	6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	PUS7L	Q9H0K6	701 aa	Known RBP	6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	IL25	Q9H293	177 aa		6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	MKRN1	Q9UHC7	482 aa	Known RBP	6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	PALD1	Q9ULE6	856 aa		6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	PCDHGA11	Q9Y5H2	935 aa		6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	SLC4A4	Q9Y6R1	1079 aa		6.57	□□□□□ -1.36
ATL1-208	ENST00000556067	ARAP2	Q8WZ64	1704 aa		6.56	□□□□□ -1.36
ATL1-208	ENST00000556067		A0A0G2JLW4	131 aa		6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	TCRBV5S4A2T	A0A5A2	114 aa		6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	TMEM229A	B2RXF0	380 aa		6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	C21orf2	O43822	256 aa		6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	DPEP1	P16444	411 aa		6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	MECOM	Q03112	1051 aa		6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	ALX1	Q15699	326 aa		6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	DALRD3	Q5D0E6	543 aa	Known RBP	6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	MFSD14B	Q5SR56	506 aa		6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	LCE2A	Q5TA79	106 aa	Predicted RBP	6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	TXNRD3	Q86VQ6	643 aa		6.56	□□□□□ -1.36
ATL1-208	ENST00000556067	TRIM50	Q86XT4	487 aa		6.56	□□□□□ -1.36

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