RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	IGDCC4	Q8TDY8	1250 aa		13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	CAPZA3	Q96KX2	299 aa		13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	GPR101	Q96P66	508 aa	Predicted RBP	13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	NBPF3	Q9H094	633 aa		13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	PARP3	Q9Y6F1	533 aa		13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	ADAMTS7	Q9UKP4	1686 aa		13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	PLEKHG2	Q9H7P9	1386 aa		13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	TMEM232	C9JQI7	657 aa		13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	UBE2Q2L	H0YL09	131 aa		13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	FMNL1	O95466	1100 aa	Predicted RBP	13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	CYP19A1	P11511	503 aa	Predicted RBP	13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.84	□□□□□ -0.19	9e-7	■■■■□ 24.7
TMPO-212	ENST00000556029	FAM47A	Q5JRC9	791 aa		13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	HEATR3	Q7Z4Q2	680 aa		13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	METTL16	Q86W50	562 aa	Known RBP	13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	VSTM4	Q8IW00	320 aa		13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	CABP5	Q9NP86	173 aa		13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	PRKAB2	O43741	272 aa		13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	PTPA	Q15257	358 aa		13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
TMPO-212	ENST00000556029	FOXN1	O15353	648 aa		13.83	□□□□□ -0.19
TMPO-212	ENST00000556029	ZEB2	O60315	1214 aa		13.83	□□□□□ -0.19
TMPO-212	ENST00000556029	DEXI	O95424	95 aa		13.83	□□□□□ -0.19
TMPO-212	ENST00000556029	CCDC175	P0C221	793 aa		13.83	□□□□□ -0.19
TMPO-212	ENST00000556029	LIFR	P42702	1097 aa		13.83	□□□□□ -0.19
TMPO-212	ENST00000556029	KANK3	Q6NY19	840 aa		13.83	□□□□□ -0.19
TMPO-212	ENST00000556029	MAPKAPK5	Q8IW41	473 aa		13.83	□□□□□ -0.19
TMPO-212	ENST00000556029	TMTC2	Q8N394	836 aa		13.83	□□□□□ -0.19
TMPO-212	ENST00000556029	USP17L12	C9JPN9	530 aa		13.83	□□□□□ -0.2
TMPO-212	ENST00000556029	USP17L21	D6R901	530 aa		13.83	□□□□□ -0.2
TMPO-212	ENST00000556029	ARHGAP6	O43182	974 aa		13.83	□□□□□ -0.2
TMPO-212	ENST00000556029	GNAT2	P19087	354 aa		13.83	□□□□□ -0.2
TMPO-212	ENST00000556029	SLF2	Q8IX21	1173 aa		13.83	□□□□□ -0.2
TMPO-212	ENST00000556029	HPSE	Q9Y251	543 aa		13.83	□□□□□ -0.2
TMPO-212	ENST00000556029	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.83	□□□□□ -0.2
TMPO-212	ENST00000556029	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.83	□□□□□ -0.2
TMPO-212	ENST00000556029	KIF5B	P33176	963 aa		13.83	□□□□□ -0.2
TMPO-212	ENST00000556029	TEX11	Q8IYF3	940 aa		13.83	□□□□□ -0.2
TMPO-212	ENST00000556029	DHX58	Q96C10	678 aa		13.83	□□□□□ -0.2
TMPO-212	ENST00000556029	CARD6	Q9BX69	1037 aa		13.83	□□□□□ -0.2
TMPO-212	ENST00000556029	MMP1	P03956	469 aa		13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	IFNAR1	P17181	557 aa		13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	CCDC40	Q4G0X9	1142 aa		13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	RBM26	Q5T8P6	1007 aa	Known RBP	13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	SGMS1	Q86VZ5	419 aa		13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	MLKL	Q8NB16	471 aa		13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	GOLGA6L9	A6NEM1	432 aa		13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	EZR	P15311	586 aa	Known RBP	13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	ADK	P55263	362 aa	Known RBP	13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	ZRSR2	Q15696	482 aa	Known RBP	13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	TRIM47	Q96LD4	638 aa		13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	MAP3K14	Q99558	947 aa		13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	VGLL3	A8MV65	326 aa		13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	GUCY1A2	P33402	732 aa		13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	KCNJ6	P48051	423 aa		13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	RASGRF1	Q13972	1273 aa		13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	SEPT12	Q8IYM1	358 aa		13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	GRAMD1C	Q8IYS0	662 aa		13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	TTC16	Q8NEE8	873 aa		13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	PLIN2	Q99541	437 aa		13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	MAN1B1	Q9UKM7	699 aa		13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	GSTO1	P78417	241 aa		13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	NR5A1	Q13285	461 aa		13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	ZNF526	Q8TF50	670 aa	Predicted RBP	13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	KCND1	Q9NSA2	647 aa		13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	GGA1	Q9UJY5	639 aa		13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	PPP2R2C	Q9Y2T4	447 aa		13.82	□□□□□ -0.2
TMPO-212	ENST00000556029		V9GY48	417 aa	Predicted RBP	13.82	□□□□□ -0.2
TMPO-212	ENST00000556029	FAM170A	A1A519	330 aa		13.81	□□□□□ -0.2
TMPO-212	ENST00000556029	ARID4A	P29374	1257 aa	Predicted RBP	13.81	□□□□□ -0.2
TMPO-212	ENST00000556029	FBXO41	Q8TF61	875 aa		13.81	□□□□□ -0.2
TMPO-212	ENST00000556029	TRIM75P	A6NK02	468 aa		13.81	□□□□□ -0.2
TMPO-212	ENST00000556029	SPECC1L	Q69YQ0	1117 aa		13.81	□□□□□ -0.2
TMPO-212	ENST00000556029	TXLNB	Q8N3L3	684 aa		13.81	□□□□□ -0.2
TMPO-212	ENST00000556029	LCORL	Q8N3X6	602 aa		13.81	□□□□□ -0.2
TMPO-212	ENST00000556029	PCDHB6	Q9Y5E3	794 aa		13.81	□□□□□ -0.2
TMPO-212	ENST00000556029	PHLPP2	Q6ZVD8	1323 aa		13.81	□□□□□ -0.2
TMPO-212	ENST00000556029	ALX1	Q15699	326 aa		13.81	□□□□□ -0.2
TMPO-212	ENST00000556029	NTRK3	Q16288	839 aa		13.81	□□□□□ -0.2
TMPO-212	ENST00000556029	RRAGB	Q5VZM2	374 aa		13.81	□□□□□ -0.2
TMPO-212	ENST00000556029	CEP57	Q86XR8	500 aa		13.81	□□□□□ -0.2
TMPO-212	ENST00000556029	NKX2-3	Q8TAU0	364 aa		13.81	□□□□□ -0.2
TMPO-212	ENST00000556029	TGFBRAP1	Q8WUH2	860 aa		13.81	□□□□□ -0.2
TMPO-212	ENST00000556029	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.81	□□□□□ -0.2
TMPO-212	ENST00000556029	GBP2	P32456	591 aa	Predicted RBP	13.8	□□□□□ -0.2
TMPO-212	ENST00000556029	GTF2I	P78347	998 aa		13.8	□□□□□ -0.2
TMPO-212	ENST00000556029	ZNF654	Q8IZM8	581 aa		13.8	□□□□□ -0.2
TMPO-212	ENST00000556029	FANCB	Q8NB91	859 aa		13.8	□□□□□ -0.2
TMPO-212	ENST00000556029	GUCA1B	Q9UMX6	200 aa		13.8	□□□□□ -0.2
TMPO-212	ENST00000556029	STK36	Q9NRP7	1315 aa		13.8	□□□□□ -0.2
TMPO-212	ENST00000556029	SMIM23	A6NLE4	172 aa		13.8	□□□□□ -0.2
TMPO-212	ENST00000556029	ERCC3	P19447	782 aa		13.8	□□□□□ -0.2
TMPO-212	ENST00000556029	DYNLL1	P63167	89 aa	Known RBP	13.8	□□□□□ -0.2
TMPO-212	ENST00000556029	MICALL1	Q8N3F8	863 aa		13.8	□□□□□ -0.2
TMPO-212	ENST00000556029	UIMC1	Q96RL1	719 aa		13.8	□□□□□ -0.2
TMPO-212	ENST00000556029	FOXP1	Q9H334	677 aa	Predicted RBP	13.8	□□□□□ -0.2
TMPO-212	ENST00000556029	L2HGDH	Q9H9P8	463 aa		13.8	□□□□□ -0.2
TMPO-212	ENST00000556029	VPS18	Q9P253	973 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms