RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, human

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACTN1-215	ENST00000555616	RBPJL	Q9UBG7	517 aa		11.46	□□□□□ -0.57
ACTN1-215	ENST00000555616	GABRQ	Q9UN88	632 aa		11.46	□□□□□ -0.57
ACTN1-215	ENST00000555616	TMX2	Q9Y320	296 aa		11.46	□□□□□ -0.57
ACTN1-215	ENST00000555616	PLIN4	Q96Q06	1357 aa		11.45	□□□□□ -0.58
ACTN1-215	ENST00000555616	BRCA2	P51587	3418 aa		11.45	□□□□□ -0.58
ACTN1-215	ENST00000555616	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.45	□□□□□ -0.58
ACTN1-215	ENST00000555616	PATL2	C9JE40	543 aa	Known RBP	11.45	□□□□□ -0.58
ACTN1-215	ENST00000555616	ERVK-9	P63128	1117 aa		11.45	□□□□□ -0.58
ACTN1-215	ENST00000555616	ERVK-24	P63145	666 aa		11.45	□□□□□ -0.58
ACTN1-215	ENST00000555616	C8orf34	Q49A92	452 aa		11.45	□□□□□ -0.58
ACTN1-215	ENST00000555616	PRPF38B	Q5VTL8	546 aa	Known RBP	11.45	□□□□□ -0.58
ACTN1-215	ENST00000555616	IFNL3	Q8IZI9	196 aa		11.45	□□□□□ -0.58
ACTN1-215	ENST00000555616	PXYLP1	Q8TE99	480 aa		11.45	□□□□□ -0.58
ACTN1-215	ENST00000555616	RUFY2	Q8WXA3	655 aa		11.45	□□□□□ -0.58
ACTN1-215	ENST00000555616	KANSL2	Q9H9L4	492 aa		11.45	□□□□□ -0.58
ACTN1-215	ENST00000555616	RABGAP1	Q9Y3P9	1069 aa		11.45	□□□□□ -0.58
ACTN1-215	ENST00000555616	MYH8	P13535	1937 aa		11.45	□□□□□ -0.58
ACTN1-215	ENST00000555616	MINDY4B	A8MYZ0	360 aa		11.44	□□□□□ -0.58
ACTN1-215	ENST00000555616	PEX10	O60683	326 aa		11.44	□□□□□ -0.58
ACTN1-215	ENST00000555616	CNMD	O75829	334 aa		11.44	□□□□□ -0.58
ACTN1-215	ENST00000555616	APP	P05067	770 aa		11.44	□□□□□ -0.58
ACTN1-215	ENST00000555616	CHML	P26374	656 aa		11.44	□□□□□ -0.58
ACTN1-215	ENST00000555616	MAPK4	P31152	587 aa		11.44	□□□□□ -0.58
ACTN1-215	ENST00000555616	KIAA1755	Q5JYT7	1200 aa		11.44	□□□□□ -0.58
ACTN1-215	ENST00000555616	TMEM106C	Q9BVX2	250 aa		11.44	□□□□□ -0.58
ACTN1-215	ENST00000555616	NAPB	Q9H115	298 aa		11.44	□□□□□ -0.58
ACTN1-215	ENST00000555616	VCPKMT	Q9H867	229 aa		11.44	□□□□□ -0.58
ACTN1-215	ENST00000555616	ZNF287	Q9HBT7	754 aa		11.44	□□□□□ -0.58
ACTN1-215	ENST00000555616	HELLS	Q9NRZ9	838 aa		11.44	□□□□□ -0.58
ACTN1-215	ENST00000555616	ZMYM6	O95789	1325 aa		11.43	□□□□□ -0.58
ACTN1-215	ENST00000555616	IGKV6D-41	A0A0C4DH26	115 aa		11.43	□□□□□ -0.58
ACTN1-215	ENST00000555616		A0A0D9SFI3	127 aa		11.43	□□□□□ -0.58
ACTN1-215	ENST00000555616	WDR46	O15213	610 aa	Known RBP	11.43	□□□□□ -0.58
ACTN1-215	ENST00000555616	ADCY3	O60266	1144 aa		11.43	□□□□□ -0.58
ACTN1-215	ENST00000555616	EEF2	P13639	858 aa	Known RBP	11.43	□□□□□ -0.58
ACTN1-215	ENST00000555616	ELN	P15502	786 aa		11.43	□□□□□ -0.58
ACTN1-215	ENST00000555616	PPARA	Q07869	468 aa		11.43	□□□□□ -0.58
ACTN1-215	ENST00000555616	CCDC129	Q6ZRS4	1044 aa		11.43	□□□□□ -0.58
ACTN1-215	ENST00000555616	SOCS4	Q8WXH5	440 aa		11.43	□□□□□ -0.58
ACTN1-215	ENST00000555616	FAM227B	Q96M60	508 aa		11.43	□□□□□ -0.58
ACTN1-215	ENST00000555616	PAGR1	Q9BTK6	254 aa		11.43	□□□□□ -0.58
ACTN1-215	ENST00000555616	BACH2	Q9BYV9	841 aa		11.43	□□□□□ -0.58
ACTN1-215	ENST00000555616	PORCN	Q9H237	461 aa		11.43	□□□□□ -0.58
ACTN1-215	ENST00000555616	UPF2	Q9HAU5	1272 aa	Known RBP	11.43	□□□□□ -0.58
ACTN1-215	ENST00000555616	GJD2	Q9UKL4	321 aa		11.43	□□□□□ -0.58
ACTN1-215	ENST00000555616	RAD50	Q92878	1312 aa		11.42	□□□□□ -0.58
ACTN1-215	ENST00000555616	REC8	O95072	547 aa		11.42	□□□□□ -0.58
ACTN1-215	ENST00000555616	INHA	P05111	366 aa		11.42	□□□□□ -0.58
ACTN1-215	ENST00000555616	CCL5	P13501	91 aa		11.42	□□□□□ -0.58
ACTN1-215	ENST00000555616	UBXN2A	P68543	259 aa		11.42	□□□□□ -0.58
ACTN1-215	ENST00000555616	CCNA1	P78396	465 aa		11.42	□□□□□ -0.58
ACTN1-215	ENST00000555616	COG2	Q14746	738 aa		11.42	□□□□□ -0.58
ACTN1-215	ENST00000555616	MTFR1	Q15390	333 aa		11.42	□□□□□ -0.58
ACTN1-215	ENST00000555616		Q3C1V9	767 aa		11.42	□□□□□ -0.58
ACTN1-215	ENST00000555616	VPS53	Q5VIR6	699 aa		11.42	□□□□□ -0.58
ACTN1-215	ENST00000555616	CWC27	Q6UX04	472 aa	Known RBP	11.42	□□□□□ -0.58
ACTN1-215	ENST00000555616	GPR142	Q7Z601	462 aa		11.42	□□□□□ -0.58
ACTN1-215	ENST00000555616	SPICE1	Q8N0Z3	855 aa		11.42	□□□□□ -0.58
ACTN1-215	ENST00000555616	SHISA4	Q96DD7	197 aa		11.42	□□□□□ -0.58
ACTN1-215	ENST00000555616	ESYT1	Q9BSJ8	1104 aa		11.42	□□□□□ -0.58
ACTN1-215	ENST00000555616	TANGO6	Q9C0B7	1094 aa		11.42	□□□□□ -0.58
ACTN1-215	ENST00000555616	MKNK2	Q9HBH9	465 aa		11.42	□□□□□ -0.58
ACTN1-215	ENST00000555616	BTBD7	Q9P203	1132 aa		11.42	□□□□□ -0.58
ACTN1-215	ENST00000555616	NYAP2	Q9P242	653 aa		11.42	□□□□□ -0.58
ACTN1-215	ENST00000555616	SYNPO2	Q9UMS6	1093 aa		11.42	□□□□□ -0.58
ACTN1-215	ENST00000555616	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
ACTN1-215	ENST00000555616	PLXNB2	O15031	1838 aa		11.42	□□□□□ -0.58
ACTN1-215	ENST00000555616	CCDC171	Q6TFL3	1326 aa		11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	RLF	Q13129	1914 aa		11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	PRDM1	O75626	825 aa		11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	MYC	P01106	439 aa	Predicted RBP	11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	HMGCR	P04035	888 aa		11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	GJB1	P08034	283 aa		11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	SLC3A2	P08195	630 aa	Known RBP	11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	XRCC5	P13010	732 aa	Known RBP	11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	EN2	P19622	333 aa	Predicted RBP	11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	MFAP1	P55081	439 aa	Known RBP	11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	PDE4B	Q07343	736 aa		11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	NMI	Q13287	307 aa	Predicted RBP	11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	ALX1	Q15699	326 aa		11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	MCMDC2	Q4G0Z9	681 aa		11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	MORN1	Q5T089	497 aa		11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	PLEKHH3	Q7Z736	793 aa		11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	MB21D1	Q8N884	522 aa		11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	USP6NL	Q92738	828 aa		11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	GOPC	Q9HD26	462 aa		11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	HOXC10	Q9NYD6	342 aa		11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	BIN2	Q9UBW5	565 aa	Predicted RBP	11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	ANAPC4	Q9UJX5	808 aa		11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	KIAA0100	Q14667	2235 aa	Known RBP	11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	ZNF236	Q9UL36	1845 aa		11.41	□□□□□ -0.58
ACTN1-215	ENST00000555616	PDE4DIP	Q5VU43	2346 aa		11.4	□□□□□ -0.58
ACTN1-215	ENST00000555616	SGSM2	O43147	1006 aa		11.4	□□□□□ -0.58
ACTN1-215	ENST00000555616	FLOT1	O75955	427 aa		11.4	□□□□□ -0.58
ACTN1-215	ENST00000555616	DSG3	P32926	999 aa		11.4	□□□□□ -0.58
ACTN1-215	ENST00000555616	GJA8	P48165	433 aa		11.4	□□□□□ -0.58
ACTN1-215	ENST00000555616	ATP2B2	Q01814	1243 aa		11.4	□□□□□ -0.58
ACTN1-215	ENST00000555616	KIAA1211	Q6ZU35	1233 aa		11.4	□□□□□ -0.58
ACTN1-215	ENST00000555616	STK11IP	Q8N1F8	1099 aa		11.4	□□□□□ -0.58

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