RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 CYP2D6P10635 497 aa7.03□□□□□ -1.28
ATXN3-230ENST00000554673 IL1R1P14778 569 aa7.03□□□□□ -1.28
ATXN3-230ENST00000554673 NPR1P16066 1061 aa7.03□□□□□ -1.28
ATXN3-230ENST00000554673 KRT76Q01546 638 aa7.03□□□□□ -1.28
ATXN3-230ENST00000554673 PKP1Q13835 747 aa7.03□□□□□ -1.28
ATXN3-230ENST00000554673 TOB2Q14106 344 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-230ENST00000554673 NR6A1Q15406 480 aa7.03□□□□□ -1.28
ATXN3-230ENST00000554673 STYK1Q6J9G0 422 aa7.03□□□□□ -1.28
ATXN3-230ENST00000554673 GPAT2Q6NUI2 795 aa7.03□□□□□ -1.28
ATXN3-230ENST00000554673 NPAS4Q8IUM7 802 aa7.03□□□□□ -1.28
ATXN3-230ENST00000554673 LINC00528Q8N1L1 170 aa7.03□□□□□ -1.28
ATXN3-230ENST00000554673 ZGPATQ8N5A5 531 aaKnown RBP7.03□□□□□ -1.28
ATXN3-230ENST00000554673 GPR161Q8N6U8 529 aaKnown RBP7.03□□□□□ -1.28
ATXN3-230ENST00000554673 MAGEB6Q8N7X4 407 aa7.03□□□□□ -1.28
ATXN3-230ENST00000554673 APPBP2Q92624 585 aa7.03□□□□□ -1.28
ATXN3-230ENST00000554673 CLP1Q92989 425 aaKnown RBP7.03□□□□□ -1.28
ATXN3-230ENST00000554673 NSUN4Q96CB9 384 aaKnown RBP7.03□□□□□ -1.28
ATXN3-230ENST00000554673 RTFDC1Q9BY42 306 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-230ENST00000554673 ARMT1Q9H993 441 aa7.03□□□□□ -1.28
ATXN3-230ENST00000554673 CD209Q9NNX6 404 aa7.03□□□□□ -1.28
ATXN3-230ENST00000554673 ANO2Q9NQ90 1003 aa7.03□□□□□ -1.28
ATXN3-230ENST00000554673 SMCHD1A6NHR9 2005 aa7.03□□□□□ -1.28
ATXN3-230ENST00000554673 NEDD4P46934 1319 aa7.02□□□□□ -1.28
ATXN3-230ENST00000554673 PDS5AQ29RF7 1337 aaKnown RBP7.02□□□□□ -1.28
ATXN3-230ENST00000554673 USP17L3A6NCW0 530 aa7.02□□□□□ -1.29
ATXN3-230ENST00000554673 USP17L4A6NCW7 530 aa7.02□□□□□ -1.29
ATXN3-230ENST00000554673 NFKBIEO00221 500 aa7.02□□□□□ -1.29
ATXN3-230ENST00000554673 GPAA1O43292 621 aa7.02□□□□□ -1.29
ATXN3-230ENST00000554673 MBD4O95243 580 aa7.02□□□□□ -1.29
ATXN3-230ENST00000554673 FGAP02671 866 aa7.02□□□□□ -1.29
ATXN3-230ENST00000554673 ST5P78524 1137 aa7.02□□□□□ -1.29
ATXN3-230ENST00000554673 EXOSC10Q01780 885 aaKnown RBP7.02□□□□□ -1.29
ATXN3-230ENST00000554673 MECOMQ03112 1051 aa7.02□□□□□ -1.29
ATXN3-230ENST00000554673 UBE3CQ15386 1083 aa7.02□□□□□ -1.29
ATXN3-230ENST00000554673 TSGA10IPQ3SY00 556 aa7.02□□□□□ -1.29
ATXN3-230ENST00000554673 MCMDC2Q4G0Z9 681 aa7.02□□□□□ -1.29
ATXN3-230ENST00000554673 USP17L2Q6R6M4 530 aa7.02□□□□□ -1.29
ATXN3-230ENST00000554673 USP17L1Q7RTZ2 530 aa7.02□□□□□ -1.29
ATXN3-230ENST00000554673 MIGA1Q8NAN2 632 aa7.02□□□□□ -1.29
ATXN3-230ENST00000554673 FLAD1Q8NFF5 587 aa7.02□□□□□ -1.29
ATXN3-230ENST00000554673 RPGRQ92834 1020 aaKnown RBP7.02□□□□□ -1.29
ATXN3-230ENST00000554673 MASTLQ96GX5 879 aa7.02□□□□□ -1.29
ATXN3-230ENST00000554673 DIAPH3Q9NSV4 1193 aa7.02□□□□□ -1.29
ATXN3-230ENST00000554673 DNMT3LQ9UJW3 386 aa7.02□□□□□ -1.29
ATXN3-230ENST00000554673 PARP3Q9Y6F1 533 aa7.02□□□□□ -1.29
ATXN3-230ENST00000554673 FAM205AQ6ZU69 1335 aa7.01□□□□□ -1.29
ATXN3-230ENST00000554673 SALL1Q9NSC2 1324 aa7.01□□□□□ -1.29
ATXN3-230ENST00000554673 ATAD5Q96QE3 1844 aa7.01□□□□□ -1.29
ATXN3-230ENST00000554673 IDH1O75874 414 aaKnown RBP7.01□□□□□ -1.29
ATXN3-230ENST00000554673 BBOX1O75936 387 aa7.01□□□□□ -1.29
ATXN3-230ENST00000554673 UQCRFS1P1P0C7P4 283 aa7.01□□□□□ -1.29
ATXN3-230ENST00000554673 GTF2E1P29083 439 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-230ENST00000554673 HIBADHP31937 336 aaKnown RBP7.01□□□□□ -1.29
ATXN3-230ENST00000554673 AK2P54819 239 aa7.01□□□□□ -1.29
ATXN3-230ENST00000554673 RHBDL3P58872 404 aa7.01□□□□□ -1.29
ATXN3-230ENST00000554673 NR1H3Q13133 447 aa7.01□□□□□ -1.29
ATXN3-230ENST00000554673 SHROOM1Q2M3G4 852 aaPredicted RBP7.01□□□□□ -1.29
ATXN3-230ENST00000554673 SLC9C2Q5TAH2 1124 aa7.01□□□□□ -1.29
ATXN3-230ENST00000554673 CYB5R4Q7L1T6 521 aa7.01□□□□□ -1.29
ATXN3-230ENST00000554673 SVOPQ8N4V2 548 aa7.01□□□□□ -1.29
ATXN3-230ENST00000554673 GIPC2Q8TF65 315 aa7.01□□□□□ -1.29
ATXN3-230ENST00000554673 SDR42E1Q8WUS8 393 aa7.01□□□□□ -1.29
ATXN3-230ENST00000554673 SHISA4Q96DD7 197 aa7.01□□□□□ -1.29
ATXN3-230ENST00000554673 RBM17Q96I25 401 aaKnown RBP7.01□□□□□ -1.29
ATXN3-230ENST00000554673 HELLSQ9NRZ9 838 aa7.01□□□□□ -1.29
ATXN3-230ENST00000554673 NSFL1CQ9UNZ2 370 aaKnown RBP7.01□□□□□ -1.29
ATXN3-230ENST00000554673 LEMD3Q9Y2U8 911 aa7.01□□□□□ -1.29
ATXN3-230ENST00000554673 MYH4Q9Y623 1939 aa7.01□□□□□ -1.29
ATXN3-230ENST00000554673 PHIPQ8WWQ0 1821 aa7.01□□□□□ -1.29
ATXN3-230ENST00000554673 PARP14Q460N5 1801 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 USP17L15C9J2P7 530 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 USP17L10C9JJH3 530 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 USP17L13C9JLJ4 530 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 USP17L12C9JPN9 530 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 USP17L11C9JVI0 530 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 USP17L21D6R901 530 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 USP17L18D6R9N7 530 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 USP17L22D6RA61 530 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 USP17L17D6RBQ6 530 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 USP17L19D6RCP7 530 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 USP17L20D6RJB6 530 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 UBE2Q2LH0YL09 131 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 C21orf2O43822 256 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 IRS1P35568 1242 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 SERPINB4P48594 390 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 MARSP56192 900 aaKnown RBP7□□□□□ -1.29
ATXN3-230ENST00000554673 HAND2P61296 217 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 USP17L24Q0WX57 530 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 CHAF1AQ13111 956 aaPredicted RBP7□□□□□ -1.29
ATXN3-230ENST00000554673 NR5A1Q13285 461 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 CUL4AQ13619 759 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 SLC35G1Q2M3R5 365 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 CCDC158Q5M9N0 1113 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 DACT2Q5SW24 774 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 ZFPM1Q8IX07 1006 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 MB21D2Q8IYB1 491 aaPredicted RBP7□□□□□ -1.29
ATXN3-230ENST00000554673 PNMA1Q8ND90 353 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 TSC1Q92574 1164 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 CDK15Q96Q40 435 aa7□□□□□ -1.29
ATXN3-230ENST00000554673 GMLQ99445 158 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms