RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 BCL11AQ9H165 835 aa7.28□□□□□ -1.24
SMARCE1P3-201ENST00000553649 FZD1Q9UP38 647 aa7.28□□□□□ -1.24
SMARCE1P3-201ENST00000553649 PCDHGC4Q9Y5F7 938 aa7.28□□□□□ -1.24
SMARCE1P3-201ENST00000553649 COL2A1P02458 1487 aaPredicted RBP7.28□□□□□ -1.24
SMARCE1P3-201ENST00000553649 ECE2O60344 883 aa7.27□□□□□ -1.25
SMARCE1P3-201ENST00000553649 EIF5BO60841 1220 aaKnown RBP7.27□□□□□ -1.25
SMARCE1P3-201ENST00000553649 GRAPQ13588 217 aa7.27□□□□□ -1.25
SMARCE1P3-201ENST00000553649 PROSER3Q2NL68 480 aa7.27□□□□□ -1.25
SMARCE1P3-201ENST00000553649 TMEM259Q4ZIN3 620 aa7.27□□□□□ -1.25
SMARCE1P3-201ENST00000553649 PARP10Q53GL7 1025 aa7.27□□□□□ -1.25
SMARCE1P3-201ENST00000553649 DDX46Q7L014 1031 aaKnown RBP7.27□□□□□ -1.25
SMARCE1P3-201ENST00000553649 ARMC9Q7Z3E5 817 aa7.27□□□□□ -1.25
SMARCE1P3-201ENST00000553649 GRAPLQ8TC17 118 aaPredicted RBP7.27□□□□□ -1.25
SMARCE1P3-201ENST00000553649 RHBDD1Q8TEB9 315 aa7.27□□□□□ -1.25
SMARCE1P3-201ENST00000553649 CLMNQ96JQ2 1002 aa7.27□□□□□ -1.25
SMARCE1P3-201ENST00000553649 ETNK1Q9HBU6 452 aa7.27□□□□□ -1.25
SMARCE1P3-201ENST00000553649 TPSG1Q9NRR2 321 aa7.27□□□□□ -1.25
SMARCE1P3-201ENST00000553649 TSPYL4Q9UJ04 414 aa7.27□□□□□ -1.25
SMARCE1P3-201ENST00000553649 POLR2AP24928 1970 aaKnown RBP7.27□□□□□ -1.25
SMARCE1P3-201ENST00000553649 ZNF646O15015 1829 aaPredicted RBP7.27□□□□□ -1.25
SMARCE1P3-201ENST00000553649 MAPK8IP3Q9UPT6 1336 aa7.27□□□□□ -1.25
SMARCE1P3-201ENST00000553649 SYN1P17600 705 aa7.26□□□□□ -1.25
SMARCE1P3-201ENST00000553649 CD33P20138 364 aa7.26□□□□□ -1.25
SMARCE1P3-201ENST00000553649 NF2P35240 595 aa7.26□□□□□ -1.25
SMARCE1P3-201ENST00000553649 TNP2Q05952 138 aa7.26□□□□□ -1.25
SMARCE1P3-201ENST00000553649 NFE2L2Q16236 605 aa7.26□□□□□ -1.25
SMARCE1P3-201ENST00000553649 WASHC4Q2M389 1173 aa7.26□□□□□ -1.25
SMARCE1P3-201ENST00000553649 NBPF9Q3BBW0 867 aa7.26□□□□□ -1.25
SMARCE1P3-201ENST00000553649 OTUD7BQ6GQQ9 843 aa7.26□□□□□ -1.25
SMARCE1P3-201ENST00000553649 C7orf61Q8IZ16 206 aa7.26□□□□□ -1.25
SMARCE1P3-201ENST00000553649 AGBL3Q8NEM8 1001 aa7.26□□□□□ -1.25
SMARCE1P3-201ENST00000553649 MYLIPQ8WY64 445 aa7.26□□□□□ -1.25
SMARCE1P3-201ENST00000553649 UBE2OQ9C0C9 1292 aaKnown RBP7.26□□□□□ -1.25
SMARCE1P3-201ENST00000553649 RNF208Q9H0X6 261 aa7.26□□□□□ -1.25
SMARCE1P3-201ENST00000553649 MYOZ2Q9NPC6 264 aa7.26□□□□□ -1.25
SMARCE1P3-201ENST00000553649 TRMT112Q9UI30 125 aaKnown RBP7.26□□□□□ -1.25
SMARCE1P3-201ENST00000553649 ANGEL1Q9UNK9 670 aaKnown RBP7.26□□□□□ -1.25
SMARCE1P3-201ENST00000553649 NUP98P52948 1817 aa7.26□□□□□ -1.25
SMARCE1P3-201ENST00000553649 DDX60Q8IY21 1712 aaKnown RBP7.25□□□□□ -1.25
SMARCE1P3-201ENST00000553649 UNCXA6NJT0 531 aa7.25□□□□□ -1.25
SMARCE1P3-201ENST00000553649 SGPL1O95470 568 aa7.25□□□□□ -1.25
SMARCE1P3-201ENST00000553649 MAPTP10636 758 aaKnown RBP7.25□□□□□ -1.25
SMARCE1P3-201ENST00000553649 ADH6P28332 368 aa7.25□□□□□ -1.25
SMARCE1P3-201ENST00000553649 CTGFP29279 349 aa7.25□□□□□ -1.25
SMARCE1P3-201ENST00000553649 PLA2G4AP47712 749 aa7.25□□□□□ -1.25
SMARCE1P3-201ENST00000553649 PRMT2P55345 433 aa7.25□□□□□ -1.25
SMARCE1P3-201ENST00000553649 MAP3K11Q16584 847 aa7.25□□□□□ -1.25
SMARCE1P3-201ENST00000553649 COPS6Q7L5N1 327 aa7.25□□□□□ -1.25
SMARCE1P3-201ENST00000553649 NLRP10Q86W26 655 aa7.25□□□□□ -1.25
SMARCE1P3-201ENST00000553649 USP38Q8NB14 1042 aa7.25□□□□□ -1.25
SMARCE1P3-201ENST00000553649 XAGE3Q8WTP9 111 aa7.25□□□□□ -1.25
SMARCE1P3-201ENST00000553649 CEP126Q9P2H0 1117 aa7.25□□□□□ -1.25
SMARCE1P3-201ENST00000553649 SH3TC1Q8TE82 1336 aa7.25□□□□□ -1.25
SMARCE1P3-201ENST00000553649 CDH23Q9H251 3354 aa7.24□□□□□ -1.25
SMARCE1P3-201ENST00000553649 ANKRD36CQ5JPF3 1778 aa7.24□□□□□ -1.25
SMARCE1P3-201ENST00000553649 KRTAP4-8A0A0G2JLE6 195 aa7.24□□□□□ -1.25
SMARCE1P3-201ENST00000553649 SCO2A0A1W2PP80 73 aa7.24□□□□□ -1.25
SMARCE1P3-201ENST00000553649 DCDC2BA2VCK2 349 aa7.24□□□□□ -1.25
SMARCE1P3-201ENST00000553649 ATXN7O15265 892 aaPredicted RBP7.24□□□□□ -1.25
SMARCE1P3-201ENST00000553649 SPATA31C1P0DKV0 1188 aa7.24□□□□□ -1.25
SMARCE1P3-201ENST00000553649 GRK4P32298 578 aa7.24□□□□□ -1.25
SMARCE1P3-201ENST00000553649 PCBP4P57723 403 aaKnown RBP7.24□□□□□ -1.25
SMARCE1P3-201ENST00000553649 LACTBP83111 547 aaPredicted RBP7.24□□□□□ -1.25
SMARCE1P3-201ENST00000553649 HSP90AB3PQ58FF7 597 aa7.24□□□□□ -1.25
SMARCE1P3-201ENST00000553649 ARTNQ5T4W7 220 aa7.24□□□□□ -1.25
SMARCE1P3-201ENST00000553649 FIGNL1Q6PIW4 674 aa7.24□□□□□ -1.25
SMARCE1P3-201ENST00000553649 LRP10Q7Z4F1 713 aa7.24□□□□□ -1.25
SMARCE1P3-201ENST00000553649 KRTAP19-1Q8IUB9 90 aa7.24□□□□□ -1.25
SMARCE1P3-201ENST00000553649 P2RX7Q99572 595 aaKnown RBP7.24□□□□□ -1.25
SMARCE1P3-201ENST00000553649 POLLQ9UGP5 575 aa7.24□□□□□ -1.25
SMARCE1P3-201ENST00000553649 HCN4Q9Y3Q4 1203 aa7.24□□□□□ -1.25
SMARCE1P3-201ENST00000553649 SCN9AQ15858 1988 aa7.24□□□□□ -1.25
SMARCE1P3-201ENST00000553649 DYRK3O43781 588 aa7.23□□□□□ -1.25
SMARCE1P3-201ENST00000553649 RIPK4P57078 832 aa7.23□□□□□ -1.25
SMARCE1P3-201ENST00000553649 TLR1Q15399 786 aa7.23□□□□□ -1.25
SMARCE1P3-201ENST00000553649 TAF1CQ15572 869 aaPredicted RBP7.23□□□□□ -1.25
SMARCE1P3-201ENST00000553649 NLRP8Q86W28 1048 aa7.23□□□□□ -1.25
SMARCE1P3-201ENST00000553649 ADAMTS19Q8TE59 1207 aa7.23□□□□□ -1.25
SMARCE1P3-201ENST00000553649 DIS3LQ8TF46 1054 aaKnown RBP7.23□□□□□ -1.25
SMARCE1P3-201ENST00000553649 BRI3BPQ8WY22 251 aa7.23□□□□□ -1.25
SMARCE1P3-201ENST00000553649 CELF1Q92879 486 aaKnown RBP7.23□□□□□ -1.25
SMARCE1P3-201ENST00000553649 PAWRQ96IZ0 340 aaKnown RBP7.23□□□□□ -1.25
SMARCE1P3-201ENST00000553649 PLEKHF1Q96S99 279 aa7.23□□□□□ -1.25
SMARCE1P3-201ENST00000553649 LRFN3Q9BTN0 628 aa7.23□□□□□ -1.25
SMARCE1P3-201ENST00000553649 C1QTNF1Q9BXJ1 281 aa7.23□□□□□ -1.25
SMARCE1P3-201ENST00000553649 ZFYVE28Q9HCC9 887 aa7.23□□□□□ -1.25
SMARCE1P3-201ENST00000553649 PODXL2Q9NZ53 605 aa7.23□□□□□ -1.25
SMARCE1P3-201ENST00000553649 SRRDQ9UH36 339 aa7.23□□□□□ -1.25
SMARCE1P3-201ENST00000553649 RIPOR2Q9Y4F9 1068 aa7.23□□□□□ -1.25
SMARCE1P3-201ENST00000553649 LAS1LQ9Y4W2 734 aaKnown RBP7.23□□□□□ -1.25
SMARCE1P3-201ENST00000553649 COL1A1P02452 1464 aaPredicted RBP7.23□□□□□ -1.25
SMARCE1P3-201ENST00000553649 ZSWIM8A7E2V4 1837 aa7.22□□□□□ -1.25
SMARCE1P3-201ENST00000553649 BDP1A6H8Y1 2624 aa7.22□□□□□ -1.25
SMARCE1P3-201ENST00000553649 WNT10BO00744 389 aa7.22□□□□□ -1.25
SMARCE1P3-201ENST00000553649 FOSL2P15408 326 aa7.22□□□□□ -1.25
SMARCE1P3-201ENST00000553649 GPSM2P81274 684 aa7.22□□□□□ -1.25
SMARCE1P3-201ENST00000553649 COL9A3Q14050 684 aaPredicted RBP7.22□□□□□ -1.25
SMARCE1P3-201ENST00000553649 KRT24Q2M2I5 525 aa7.22□□□□□ -1.25
SMARCE1P3-201ENST00000553649 TBC1D9Q6ZT07 1266 aa7.22□□□□□ -1.25
SMARCE1P3-201ENST00000553649 ZNF295-AS1Q8N0V1 137 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms