RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 RAB21Q9UL25 225 aa5.99□□□□□ -1.45
TMEM55B-204ENST00000553602 NFE2L3Q9Y4A8 694 aa5.99□□□□□ -1.45
TMEM55B-204ENST00000553602 SLC12A7Q9Y666 1083 aa5.99□□□□□ -1.45
TMEM55B-204ENST00000553602 XIRP1Q702N8 1843 aaKnown RBP5.99□□□□□ -1.45
TMEM55B-204ENST00000553602 BCL9O00512 1426 aa5.99□□□□□ -1.45
TMEM55B-204ENST00000553602 SOS2Q07890 1332 aaPredicted RBP5.99□□□□□ -1.45
TMEM55B-204ENST00000553602 ZNF532Q9HCE3 1301 aa5.99□□□□□ -1.45
TMEM55B-204ENST00000553602 MAST2Q6P0Q8 1798 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 SCN7AQ01118 1682 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 ZNF831Q5JPB2 1677 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 A0A087WWV3 80 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 B4E1Z4 1266 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 PDE8AO60658 829 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 URI1O94763 535 aaPredicted RBP5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 TBC1D8O95759 1140 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 SLC5A1P13866 664 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 XBP1P17861 261 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 ITGA6P23229 1130 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 MARCKSP29966 332 aaPredicted RBP5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 CASQ1P31415 396 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 TXLNAP40222 546 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 TRAPPC10P48553 1259 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 TOB1P50616 345 aaPredicted RBP5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 PPP2R3AQ06190 1150 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 MAP3K12Q12852 859 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 GPS2Q13227 327 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 CUL4BQ13620 913 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 NR1I3Q14994 352 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 RTN1Q16799 776 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 LDHAL6AQ6ZMR3 332 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 ZNF662Q6ZS27 426 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 MICU3Q86XE3 530 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 CNGA4Q8IV77 575 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 FOXP4Q8IVH2 680 aaPredicted RBP5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 DIS3L2Q8IYB7 885 aaKnown RBP5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 CEP112Q8N8E3 955 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 IQUBQ8NA54 791 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 MSANTD4Q8NCY6 345 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 ERCC4Q92889 916 aaPredicted RBP5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 AIDAQ96BJ3 306 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 AIFM3Q96NN9 605 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 UTP14AQ9BVJ6 771 aaKnown RBP5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 NACAP1Q9BZK3 213 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 NAPBQ9H115 298 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 EPB41L4AQ9HCS5 686 aaPredicted RBP5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 ARFGAP3Q9NP61 516 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 PIH1D3Q9NQM4 214 aaKnown RBP5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 STRN4Q9NRL3 753 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 TTF2Q9UNY4 1162 aaKnown RBP5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 LHX6Q9UPM6 363 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 KIAA1551Q9HCM1 1747 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 A0A1B0GUL6 1792 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 PDS5AQ29RF7 1337 aaKnown RBP5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 SYNRGQ9UMZ2 1314 aa5.98□□□□□ -1.45
TMEM55B-204ENST00000553602 ITGB4P16144 1822 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 PHLPP1O60346 1717 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 ERICH2A1L162 156 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 LRRC10BA6NIK2 292 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 TRIM75PA6NK02 468 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 TMEM232C9JQI7 657 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 AKR1B15C9JRZ8 316 aaPredicted RBP5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 TULP2O00295 520 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 MAP2K7O14733 419 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 IFIT3O14879 490 aaKnown RBP5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 MFAP3LO75121 409 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 ERLIN1O75477 346 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 DDAH1O94760 285 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 CALM1P0DP23 149 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 CALM2P0DP24 149 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 CALM3P0DP25 149 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 HOXA7P31268 230 aaPredicted RBP5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 FMR1Q06787 632 aaKnown RBP eCLIP5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 PDE4BQ07343 736 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 MCM6Q14566 821 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 WTAPQ15007 396 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 WHAMMP3Q1A5X7 153 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 FILIP1LQ4L180 1135 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 POTEGQ6S5H5 508 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 NFXL1Q6ZNB6 911 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 MFSD6Q6ZSS7 791 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 RASGRP2Q7LDG7 609 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 SRGAP1Q7Z6B7 1085 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 IFNL3Q8IZI9 196 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 CRACR2BQ8N4Y2 399 aaPredicted RBP5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 LRRN4CLQ8ND94 238 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 RUBCNQ92622 972 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 EXOC4Q96A65 974 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 CARD6Q9BX69 1037 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 SLC26A6Q9BXS9 759 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 GBP3Q9H0R5 595 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 PRDM11Q9NQV5 511 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 GJB4Q9NTQ9 266 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 RBM28Q9NW13 759 aaKnown RBP5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 TMOD3Q9NYL9 352 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 ADD3Q9UEY8 706 aaKnown RBP5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 CDC23Q9UJX2 597 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 LAMB1P07942 1786 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 NUP98P52948 1817 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms