RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 MORC3Q14149 939 aa14.75□□□□□ -0.05
SHMT2-205ENST00000553474 ARID5BQ14865 1188 aa14.75□□□□□ -0.05
SHMT2-205ENST00000553474 FOXP4Q8IVH2 680 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-205ENST00000553474 ZNF710Q8N1W2 664 aa14.75□□□□□ -0.05
SHMT2-205ENST00000553474 CCDC94Q9BW85 323 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-205ENST00000553474 PPP1R1BQ9UD71 204 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-205ENST00000553474 ACTN4O43707 911 aaKnown RBP14.74□□□□□ -0.05
SHMT2-205ENST00000553474 ARMCX5Q6P1M9 558 aa14.74□□□□□ -0.05
SHMT2-205ENST00000553474 VSTM4Q8IW00 320 aa14.74□□□□□ -0.05
SHMT2-205ENST00000553474 CCDC82Q8N4S0 544 aa14.74□□□□□ -0.05
SHMT2-205ENST00000553474 WDR66Q8TBY9 1149 aa14.74□□□□□ -0.05
SHMT2-205ENST00000553474 SPON1Q9HCB6 807 aa14.74□□□□□ -0.05
SHMT2-205ENST00000553474 KIF13BQ9NQT8 1826 aa14.74□□□□□ -0.05
SHMT2-205ENST00000553474 SLFN14P0C7P3 912 aa14.73□□□□□ -0.05
SHMT2-205ENST00000553474 CALML3P27482 149 aa14.73□□□□□ -0.05
SHMT2-205ENST00000553474 CFAP100Q494V2 611 aa14.73□□□□□ -0.05
SHMT2-205ENST00000553474 DGKHQ86XP1 1220 aa14.73□□□□□ -0.05
SHMT2-205ENST00000553474 OXER1Q8TDS5 423 aa14.73□□□□□ -0.05
SHMT2-205ENST00000553474 SH3GLB2Q9NR46 395 aa14.73□□□□□ -0.05
SHMT2-205ENST00000553474 MAN1B1Q9UKM7 699 aa14.73□□□□□ -0.05
SHMT2-205ENST00000553474 LEMD3Q9Y2U8 911 aa14.73□□□□□ -0.05
SHMT2-205ENST00000553474 V9GY48 417 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-205ENST00000553474 CNTNAP5Q8WYK1 1306 aa14.73□□□□□ -0.05
SHMT2-205ENST00000553474 ROBO3Q96MS0 1386 aa14.73□□□□□ -0.05
SHMT2-205ENST00000553474 GSTO1P78417 241 aa14.73□□□□□ -0.05
SHMT2-205ENST00000553474 C15orf52Q6ZUT6 534 aaKnown RBP14.73□□□□□ -0.05
SHMT2-205ENST00000553474 ANKS1AQ92625 1134 aa14.73□□□□□ -0.05
SHMT2-205ENST00000553474 TNFRSF25Q93038 417 aa14.73□□□□□ -0.05
SHMT2-205ENST00000553474 GSDMAQ96QA5 445 aa14.73□□□□□ -0.05
SHMT2-205ENST00000553474 CSRNP2Q9H175 543 aa14.73□□□□□ -0.05
SHMT2-205ENST00000553474 TMX1Q9H3N1 280 aa14.73□□□□□ -0.05
SHMT2-205ENST00000553474 SERTAD1Q9UHV2 236 aa14.73□□□□□ -0.05
SHMT2-205ENST00000553474 IRS2Q9Y4H2 1338 aa14.72□□□□□ -0.05
SHMT2-205ENST00000553474 TOP1P11387 765 aaKnown RBP14.72□□□□□ -0.05
SHMT2-205ENST00000553474 ATP1A3P13637 1013 aa14.72□□□□□ -0.05
SHMT2-205ENST00000553474 ZNF18P17022 549 aa14.72□□□□□ -0.05
SHMT2-205ENST00000553474 PTGER2P43116 358 aa14.72□□□□□ -0.05
SHMT2-205ENST00000553474 GNAQP50148 359 aa14.72□□□□□ -0.05
SHMT2-205ENST00000553474 PDE4CQ08493 712 aa14.72□□□□□ -0.05
SHMT2-205ENST00000553474 E4F1Q66K89 784 aaPredicted RBP14.72□□□□□ -0.05
SHMT2-205ENST00000553474 AMOTL1Q8IY63 956 aa14.72□□□□□ -0.05
SHMT2-205ENST00000553474 CMTR1Q8N1G2 835 aaKnown RBP14.72□□□□□ -0.05
SHMT2-205ENST00000553474 FANCLQ9NW38 375 aa14.72□□□□□ -0.05
SHMT2-205ENST00000553474 VPS54Q9P1Q0 977 aa14.72□□□□□ -0.05
SHMT2-205ENST00000553474 C10orf71Q711Q0 1435 aa14.72□□□□□ -0.05
SHMT2-205ENST00000553474 SCG2P13521 617 aa14.71□□□□□ -0.05
SHMT2-205ENST00000553474 BMP6P22004 513 aa14.71□□□□□ -0.05
SHMT2-205ENST00000553474 PLCD1P51178 756 aa14.71□□□□□ -0.05
SHMT2-205ENST00000553474 ATP2C1P98194 919 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-205ENST00000553474 PFKFB3Q16875 520 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-205ENST00000553474 ARL6IP4Q66PJ3 421 aaKnown RBP14.71□□□□□ -0.05
SHMT2-205ENST00000553474 SH3RF1Q7Z6J0 888 aa14.71□□□□□ -0.05
SHMT2-205ENST00000553474 DZIP1Q86YF9 867 aaKnown RBP14.71□□□□□ -0.05
SHMT2-205ENST00000553474 PDCL2Q8N4E4 241 aa14.71□□□□□ -0.05
SHMT2-205ENST00000553474 GOLGA6L9A6NEM1 432 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 TSPY2A6NKD2 308 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 USP27XA6NNY8 438 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 ARHGAP6O43182 974 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 PLEKHA8P1O95397 391 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 BAG3O95817 575 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 SEMA3FQ13275 785 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 ISM2Q6H9L7 571 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 GALNT17Q6IS24 598 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 SGIP1Q9BQI5 828 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 ZNF287Q9HBT7 754 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 TCP11L1Q9NUJ3 509 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 CGNQ9P2M7 1197 aaKnown RBP14.7□□□□□ -0.06
SHMT2-205ENST00000553474 CYP2D7A0A087X1C5 515 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 ZSCAN12O43309 604 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 LDHCP07864 332 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 PRDX5P30044 214 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 PPP4CP60510 307 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 GRIN1Q05586 938 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 NPY5RQ15761 445 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 TTC38Q5R3I4 469 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 ERO1AQ96HE7 468 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 PPP1R13BQ96KQ4 1090 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 CTAGE1Q96RT6 745 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 FEZ1Q99689 392 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 MKRN1Q9UHC7 482 aaKnown RBP14.7□□□□□ -0.06
SHMT2-205ENST00000553474 NFE2L3Q9Y4A8 694 aa14.7□□□□□ -0.06
SHMT2-205ENST00000553474 PRDM1O75626 825 aa14.69□□□□□ -0.06
SHMT2-205ENST00000553474 LDHBP07195 334 aaKnown RBP14.69□□□□□ -0.06
SHMT2-205ENST00000553474 NCBP1Q09161 790 aaKnown RBP14.69□□□□□ -0.06
SHMT2-205ENST00000553474 TBX2Q13207 712 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-205ENST00000553474 GRAPQ13588 217 aa14.69□□□□□ -0.06
SHMT2-205ENST00000553474 SPECC1Q5M775 1068 aa14.69□□□□□ -0.06
SHMT2-205ENST00000553474 C12orf60Q5U649 245 aa14.69□□□□□ -0.06
SHMT2-205ENST00000553474 SPECC1LQ69YQ0 1117 aa14.69□□□□□ -0.06
SHMT2-205ENST00000553474 SRBD1Q8N5C6 995 aaKnown RBP14.69□□□□□ -0.06
SHMT2-205ENST00000553474 GRAPLQ8TC17 118 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-205ENST00000553474 SHISA4Q96DD7 197 aa14.69□□□□□ -0.06
SHMT2-205ENST00000553474 L2HGDHQ9H9P8 463 aa14.69□□□□□ -0.06
SHMT2-205ENST00000553474 TAOK2Q9UL54 1235 aa14.69□□□□□ -0.06
SHMT2-205ENST00000553474 XDHP47989 1333 aa14.69□□□□□ -0.06
SHMT2-205ENST00000553474 NAV1Q8NEY1 1877 aa14.69□□□□□ -0.06
SHMT2-205ENST00000553474 WTIPA6NIX2 430 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-205ENST00000553474 FOXN1O15353 648 aa14.68□□□□□ -0.06
SHMT2-205ENST00000553474 STX10O60499 249 aa14.68□□□□□ -0.06
SHMT2-205ENST00000553474 CDK11BP21127 795 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms