RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 VEGFAP15692 232 aaPredicted RBP16.07■□□□□ 0.16
RAB3IP-216ENST00000552199 NLRP5P59047 1200 aa16.07■□□□□ 0.16
RAB3IP-216ENST00000552199 DRC7Q8IY82 874 aa16.07■□□□□ 0.16
RAB3IP-216ENST00000552199 STAG2Q8N3U4 1231 aa16.07■□□□□ 0.16
RAB3IP-216ENST00000552199 CNNM3Q8NE01 707 aa16.07■□□□□ 0.16
RAB3IP-216ENST00000552199 NEDD1Q8NHV4 660 aa16.07■□□□□ 0.16
RAB3IP-216ENST00000552199 EYA3Q99504 573 aa16.07■□□□□ 0.16
RAB3IP-216ENST00000552199 TMEM47Q9BQJ4 181 aa16.07■□□□□ 0.16
RAB3IP-216ENST00000552199 KCNF1Q9H3M0 494 aa16.07■□□□□ 0.16
RAB3IP-216ENST00000552199 SNED1Q8TER0 1413 aa16.07■□□□□ 0.16
RAB3IP-216ENST00000552199 QSER1Q2KHR3 1735 aa16.06■□□□□ 0.16
RAB3IP-216ENST00000552199 BMP15O95972 392 aa16.06■□□□□ 0.16
RAB3IP-216ENST00000552199 PNOCQ13519 176 aa16.06■□□□□ 0.16
RAB3IP-216ENST00000552199 METTL16Q86W50 562 aaKnown RBP16.06■□□□□ 0.16
RAB3IP-216ENST00000552199 PIBF1Q8WXW3 757 aa16.06■□□□□ 0.16
RAB3IP-216ENST00000552199 MRFAP1L1Q96HT8 127 aa16.06■□□□□ 0.16
RAB3IP-216ENST00000552199 SH3GLB2Q9NR46 395 aa16.06■□□□□ 0.16
RAB3IP-216ENST00000552199 NOM1Q5C9Z4 860 aaKnown RBP16.06■□□□□ 0.16
RAB3IP-216ENST00000552199 CERS5Q8N5B7 392 aa16.06■□□□□ 0.16
RAB3IP-216ENST00000552199 CSRNP2Q9H175 543 aa16.06■□□□□ 0.16
RAB3IP-216ENST00000552199 TMX4Q9H1E5 349 aaPredicted RBP16.06■□□□□ 0.16
RAB3IP-216ENST00000552199 PTGS1P23219 599 aa16.05■□□□□ 0.16
RAB3IP-216ENST00000552199 CALML3P27482 149 aa16.05■□□□□ 0.16
RAB3IP-216ENST00000552199 MDM2Q00987 491 aaPredicted RBP16.05■□□□□ 0.16
RAB3IP-216ENST00000552199 DOK7Q18PE1 504 aa16.05■□□□□ 0.16
RAB3IP-216ENST00000552199 CCDC186Q7Z3E2 898 aa16.05■□□□□ 0.16
RAB3IP-216ENST00000552199 NAP1L5Q96NT1 182 aaPredicted RBP16.05■□□□□ 0.16
RAB3IP-216ENST00000552199 CLIP2Q9UDT6 1046 aa16.05■□□□□ 0.16
RAB3IP-216ENST00000552199 HOOK1Q9UJC3 728 aaKnown RBP16.05■□□□□ 0.16
RAB3IP-216ENST00000552199 STX8Q9UNK0 236 aa16.05■□□□□ 0.16
RAB3IP-216ENST00000552199 PALM3A6NDB9 673 aaPredicted RBP16.04■□□□□ 0.16
RAB3IP-216ENST00000552199 SMTNL1A8MU46 457 aa16.04■□□□□ 0.16
RAB3IP-216ENST00000552199 POLR2DO15514 142 aaKnown RBP16.04■□□□□ 0.16
RAB3IP-216ENST00000552199 RXRBP28702 533 aa16.04■□□□□ 0.16
RAB3IP-216ENST00000552199 TTC38Q5R3I4 469 aa16.04■□□□□ 0.16
RAB3IP-216ENST00000552199 MSL1Q68DK7 614 aa16.04■□□□□ 0.16
RAB3IP-216ENST00000552199 FOXP4Q8IVH2 680 aaPredicted RBP16.04■□□□□ 0.16
RAB3IP-216ENST00000552199 LZTS2Q9BRK4 669 aa16.04■□□□□ 0.16
RAB3IP-216ENST00000552199 NRBP1Q9UHY1 535 aa16.04■□□□□ 0.16
RAB3IP-216ENST00000552199 F8W031 263 aaPredicted RBP16.04■□□□□ 0.16
RAB3IP-216ENST00000552199 WNT7AO00755 349 aa16.04■□□□□ 0.16
RAB3IP-216ENST00000552199 TRAPPC10P48553 1259 aa16.04■□□□□ 0.16
RAB3IP-216ENST00000552199 ZNF174Q15697 407 aa16.04■□□□□ 0.16
RAB3IP-216ENST00000552199 SLC35G1Q2M3R5 365 aa16.04■□□□□ 0.16
RAB3IP-216ENST00000552199 ISM2Q6H9L7 571 aa16.04■□□□□ 0.16
RAB3IP-216ENST00000552199 FBXO41Q8TF61 875 aa16.04■□□□□ 0.16
RAB3IP-216ENST00000552199 ZNF622Q969S3 477 aaKnown RBP eCLIP16.04■□□□□ 0.16
RAB3IP-216ENST00000552199 FERMT2Q96AC1 680 aa16.04■□□□□ 0.16
RAB3IP-216ENST00000552199 SERTAD1Q9UHV2 236 aa16.04■□□□□ 0.16
RAB3IP-216ENST00000552199 TTF2Q9UNY4 1162 aaKnown RBP16.04■□□□□ 0.16
RAB3IP-216ENST00000552199 TNS1Q9HBL0 1735 aaKnown RBP16.03■□□□□ 0.16
RAB3IP-216ENST00000552199 NOLC1Q14978 699 aaKnown RBP eCLIP16.03■□□□□ 0.16
RAB3IP-216ENST00000552199 BLIDQ8IZY5 108 aa16.03■□□□□ 0.16
RAB3IP-216ENST00000552199 PCDHA5Q9Y5H7 936 aa16.03■□□□□ 0.16
RAB3IP-216ENST00000552199 G3V3G9 751 aa16.02■□□□□ 0.16
RAB3IP-216ENST00000552199 IKBKBO14920 756 aa16.02■□□□□ 0.16
RAB3IP-216ENST00000552199 ADAMTS3O15072 1205 aa16.02■□□□□ 0.16
RAB3IP-216ENST00000552199 FOXN1O15353 648 aa16.02■□□□□ 0.16
RAB3IP-216ENST00000552199 CYTH3O43739 400 aa16.02■□□□□ 0.16
RAB3IP-216ENST00000552199 NOVP48745 357 aa16.02■□□□□ 0.16
RAB3IP-216ENST00000552199 NCAPHQ15003 741 aa16.02■□□□□ 0.16
RAB3IP-216ENST00000552199 DCAF8Q5TAQ9 597 aa16.02■□□□□ 0.16
RAB3IP-216ENST00000552199 KANK3Q6NY19 840 aa16.02■□□□□ 0.16
RAB3IP-216ENST00000552199 PIK3AP1Q6ZUJ8 805 aa16.02■□□□□ 0.16
RAB3IP-216ENST00000552199 USP49Q70CQ1 688 aa16.02■□□□□ 0.16
RAB3IP-216ENST00000552199 C2CD5Q86YS7 1000 aa16.02■□□□□ 0.16
RAB3IP-216ENST00000552199 KIAA1524Q8TCG1 905 aa16.02■□□□□ 0.16
RAB3IP-216ENST00000552199 GPKOWQ92917 476 aaPredicted RBP eCLIP16.02■□□□□ 0.16
RAB3IP-216ENST00000552199 MXD3Q9BW11 206 aa16.02■□□□□ 0.16
RAB3IP-216ENST00000552199 PYCARDQ9ULZ3 195 aa16.02■□□□□ 0.16
RAB3IP-216ENST00000552199 RGPD3A6NKT7 1758 aaPredicted RBP16.02■□□□□ 0.15
RAB3IP-216ENST00000552199 RGPD4Q7Z3J3 1758 aa16.02■□□□□ 0.15
RAB3IP-216ENST00000552199 ACTN4O43707 911 aaKnown RBP16.02■□□□□ 0.15
RAB3IP-216ENST00000552199 TOP1P11387 765 aaKnown RBP16.02■□□□□ 0.15
RAB3IP-216ENST00000552199 TPM4P67936 248 aa16.02■□□□□ 0.15
RAB3IP-216ENST00000552199 ATP2C1P98194 919 aaPredicted RBP16.02■□□□□ 0.15
RAB3IP-216ENST00000552199 GABPAQ06546 454 aa16.02■□□□□ 0.15
RAB3IP-216ENST00000552199 PICALMQ13492 652 aa16.02■□□□□ 0.15
RAB3IP-216ENST00000552199 POSTNQ15063 836 aa16.02■□□□□ 0.15
RAB3IP-216ENST00000552199 STYK1Q6J9G0 422 aa16.02■□□□□ 0.15
RAB3IP-216ENST00000552199 CEP95Q96GE4 821 aa16.02■□□□□ 0.15
RAB3IP-216ENST00000552199 SPTLC3Q9NUV7 552 aa16.02■□□□□ 0.15
RAB3IP-216ENST00000552199 USP40Q9NVE5 1235 aa16.02■□□□□ 0.15
RAB3IP-216ENST00000552199 PCDHA4Q9UN74 947 aa16.02■□□□□ 0.15
RAB3IP-216ENST00000552199 MTMR7Q9Y216 660 aa16.02■□□□□ 0.15
RAB3IP-216ENST00000552199 KLRF2D3W0D1 207 aa16.01■□□□□ 0.15
RAB3IP-216ENST00000552199 PTGDRQ13258 359 aa16.01■□□□□ 0.15
RAB3IP-216ENST00000552199 HHIPL2Q6UWX4 724 aa16.01■□□□□ 0.15
RAB3IP-216ENST00000552199 SPZ1Q9BXG8 430 aa16.01■□□□□ 0.15
RAB3IP-216ENST00000552199 DDX4Q9NQI0 724 aaKnown RBP16.01■□□□□ 0.15
RAB3IP-216ENST00000552199 PARP1P09874 1014 aaKnown RBP16■□□□□ 0.15
RAB3IP-216ENST00000552199 SCNN1DP51172 638 aa16■□□□□ 0.15
RAB3IP-216ENST00000552199 CCDC144BQ3MJ40 725 aa16■□□□□ 0.15
RAB3IP-216ENST00000552199 NT5DC1Q5TFE4 455 aa16■□□□□ 0.15
RAB3IP-216ENST00000552199 WWC2Q6AWC2 1192 aa16■□□□□ 0.15
RAB3IP-216ENST00000552199 GALNT17Q6IS24 598 aa16■□□□□ 0.15
RAB3IP-216ENST00000552199 TYW1BQ6NUM6 668 aa16■□□□□ 0.15
RAB3IP-216ENST00000552199 PODNQ7Z5L7 613 aa16■□□□□ 0.15
RAB3IP-216ENST00000552199 FAM177A1Q8N128 213 aaPredicted RBP16■□□□□ 0.15
RAB3IP-216ENST00000552199 C17orf53Q8N3J3 647 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms