RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 LHX8Q68G74 356 aa13.12□□□□□ -0.31
PFDN5-210ENST00000550513 TMEM179Q6ZVK1 233 aa13.12□□□□□ -0.31
PFDN5-210ENST00000550513 EDC3Q96F86 508 aaKnown RBP13.12□□□□□ -0.31
PFDN5-210ENST00000550513 LRCH3Q96II8 777 aa13.12□□□□□ -0.31
PFDN5-210ENST00000550513 ARMT1Q9H993 441 aa13.12□□□□□ -0.31
PFDN5-210ENST00000550513 PAG1Q9NWQ8 432 aa13.12□□□□□ -0.31
PFDN5-210ENST00000550513 SWAP70Q9UH65 585 aa13.12□□□□□ -0.31
PFDN5-210ENST00000550513 COG6Q9Y2V7 657 aa13.12□□□□□ -0.31
PFDN5-210ENST00000550513 COL6A3P12111 3177 aa13.12□□□□□ -0.31
PFDN5-210ENST00000550513 RAB11FIP3O75154 756 aa13.11□□□□□ -0.31
PFDN5-210ENST00000550513 MBD4O95243 580 aa13.11□□□□□ -0.31
PFDN5-210ENST00000550513 SLC44A5Q8NCS7 719 aa13.11□□□□□ -0.31
PFDN5-210ENST00000550513 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.11□□□□□ -0.31
PFDN5-210ENST00000550513 FLRT1Q9NZU1 646 aa13.11□□□□□ -0.31
PFDN5-210ENST00000550513 SMCHD1A6NHR9 2005 aa13.11□□□□□ -0.31
PFDN5-210ENST00000550513 MCM3APO60318 1980 aa13.11□□□□□ -0.31
PFDN5-210ENST00000550513 A0A1W2PRG0 241 aa13.1□□□□□ -0.31
PFDN5-210ENST00000550513 MSCO60682 206 aa13.1□□□□□ -0.31
PFDN5-210ENST00000550513 HOXC6P09630 235 aa13.1□□□□□ -0.31
PFDN5-210ENST00000550513 CYP2D6P10635 497 aa13.1□□□□□ -0.31
PFDN5-210ENST00000550513 ADD2P35612 726 aa13.1□□□□□ -0.31
PFDN5-210ENST00000550513 MAGEA10P43363 369 aaPredicted RBP13.1□□□□□ -0.31
PFDN5-210ENST00000550513 SIRT2Q8IXJ6 389 aa13.1□□□□□ -0.31
PFDN5-210ENST00000550513 AMOTL1Q8IY63 956 aa13.1□□□□□ -0.31
PFDN5-210ENST00000550513 CHMP4BQ9H444 224 aaKnown RBP13.1□□□□□ -0.31
PFDN5-210ENST00000550513 ARHGEF10LQ9HCE6 1279 aa13.1□□□□□ -0.31
PFDN5-210ENST00000550513 ZBTB40Q9NUA8 1239 aa13.1□□□□□ -0.31
PFDN5-210ENST00000550513 DDX20Q9UHI6 824 aaKnown RBP13.1□□□□□ -0.31
PFDN5-210ENST00000550513 CNGA1P29973 690 aa13.09□□□□□ -0.31
PFDN5-210ENST00000550513 ATP2B2Q01814 1243 aa13.09□□□□□ -0.31
PFDN5-210ENST00000550513 ICA1Q05084 483 aa13.09□□□□□ -0.31
PFDN5-210ENST00000550513 COG2Q14746 738 aa13.09□□□□□ -0.31
PFDN5-210ENST00000550513 LRRC26Q2I0M4 334 aa13.09□□□□□ -0.31
PFDN5-210ENST00000550513 CLEC10AQ8IUN9 316 aa13.09□□□□□ -0.31
PFDN5-210ENST00000550513 TDHQ8IZJ6 230 aa13.09□□□□□ -0.31
PFDN5-210ENST00000550513 NPLOC4Q8TAT6 608 aa13.09□□□□□ -0.31
PFDN5-210ENST00000550513 LPAR1Q92633 364 aa13.09□□□□□ -0.31
PFDN5-210ENST00000550513 DYNLL2Q96FJ2 89 aa13.09□□□□□ -0.31
PFDN5-210ENST00000550513 MOV10L1Q9BXT6 1211 aaKnown RBP13.09□□□□□ -0.31
PFDN5-210ENST00000550513 SPATC1LQ9H0A9 340 aa13.09□□□□□ -0.31
PFDN5-210ENST00000550513 BOLA2Q9H3K6 86 aa13.09□□□□□ -0.31
PFDN5-210ENST00000550513 SH2D4AQ9H788 454 aa13.09□□□□□ -0.31
PFDN5-210ENST00000550513 ATP8A2Q9NTI2 1148 aa13.09□□□□□ -0.31
PFDN5-210ENST00000550513 PRKAB2O43741 272 aa13.08□□□□□ -0.32
PFDN5-210ENST00000550513 FLOT1O75955 427 aa13.08□□□□□ -0.32
PFDN5-210ENST00000550513 CYBAP13498 195 aa13.08□□□□□ -0.32
PFDN5-210ENST00000550513 AKR1B1P15121 316 aa13.08□□□□□ -0.32
PFDN5-210ENST00000550513 ATP5JP18859 108 aa13.08□□□□□ -0.32
PFDN5-210ENST00000550513 ADORA2AP29274 412 aa13.08□□□□□ -0.32
PFDN5-210ENST00000550513 CYP2C19P33261 490 aa13.08□□□□□ -0.32
PFDN5-210ENST00000550513 SLFNL1Q499Z3 407 aa13.08□□□□□ -0.32
PFDN5-210ENST00000550513 DPP9Q86TI2 863 aa13.08□□□□□ -0.32
PFDN5-210ENST00000550513 MB21D1Q8N884 522 aa13.08□□□□□ -0.32
PFDN5-210ENST00000550513 SHCBP1Q8NEM2 672 aa13.08□□□□□ -0.32
PFDN5-210ENST00000550513 DDRGK1Q96HY6 314 aa13.08□□□□□ -0.32
PFDN5-210ENST00000550513 HAUS7Q99871 368 aa13.08□□□□□ -0.32
PFDN5-210ENST00000550513 UBE2OQ9C0C9 1292 aaKnown RBP13.08□□□□□ -0.32
PFDN5-210ENST00000550513 HOXC10Q9NYD6 342 aa13.08□□□□□ -0.32
PFDN5-210ENST00000550513 DNM1LO00429 736 aa13.07□□□□□ -0.32
PFDN5-210ENST00000550513 WDR46O15213 610 aaKnown RBP13.07□□□□□ -0.32
PFDN5-210ENST00000550513 ERCC3P19447 782 aa13.07□□□□□ -0.32
PFDN5-210ENST00000550513 PLS1Q14651 629 aa13.07□□□□□ -0.32
PFDN5-210ENST00000550513 KIAA1755Q5JYT7 1200 aa13.07□□□□□ -0.32
PFDN5-210ENST00000550513 OLFML2BQ68BL8 750 aa13.07□□□□□ -0.32
PFDN5-210ENST00000550513 SPICE1Q8N0Z3 855 aa13.07□□□□□ -0.32
PFDN5-210ENST00000550513 SENP6Q9GZR1 1112 aaPredicted RBP13.07□□□□□ -0.32
PFDN5-210ENST00000550513 VCPKMTQ9H867 229 aa13.07□□□□□ -0.32
PFDN5-210ENST00000550513 LRRC37A2A6NM11 1700 aa13.07□□□□□ -0.32
PFDN5-210ENST00000550513 CYP2D7A0A087X1C5 515 aa13.06□□□□□ -0.32
PFDN5-210ENST00000550513 STRNO43815 780 aa13.06□□□□□ -0.32
PFDN5-210ENST00000550513 CDK8P49336 464 aa13.06□□□□□ -0.32
PFDN5-210ENST00000550513 UBE3CQ15386 1083 aa13.06□□□□□ -0.32
PFDN5-210ENST00000550513 LRIT3Q3SXY7 679 aa13.06□□□□□ -0.32
PFDN5-210ENST00000550513 C12orf60Q5U649 245 aa13.06□□□□□ -0.32
PFDN5-210ENST00000550513 ZSCAN25Q6NSZ9 544 aa13.06□□□□□ -0.32
PFDN5-210ENST00000550513 GPR153Q6NV75 609 aa13.06□□□□□ -0.32
PFDN5-210ENST00000550513 SAMD1Q6SPF0 538 aaPredicted RBP13.06□□□□□ -0.32
PFDN5-210ENST00000550513 C16orf86Q6ZW13 317 aa13.06□□□□□ -0.32
PFDN5-210ENST00000550513 NCAPG2Q86XI2 1143 aa13.06□□□□□ -0.32
PFDN5-210ENST00000550513 TRPV1Q8NER1 839 aa13.06□□□□□ -0.32
PFDN5-210ENST00000550513 ATG4CQ96DT6 458 aa13.06□□□□□ -0.32
PFDN5-210ENST00000550513 CCDC17Q96LX7 622 aa13.06□□□□□ -0.32
PFDN5-210ENST00000550513 LRRCC1Q9C099 1032 aa13.06□□□□□ -0.32
PFDN5-210ENST00000550513 MROH8Q9H579 483 aa13.06□□□□□ -0.32
PFDN5-210ENST00000550513 SLC5A4Q9NY91 659 aa13.06□□□□□ -0.32
PFDN5-210ENST00000550513 RCAN3Q9UKA8 241 aa13.06□□□□□ -0.32
PFDN5-210ENST00000550513 TMX2Q9Y320 296 aa13.06□□□□□ -0.32
PFDN5-210ENST00000550513 SLC4A4Q9Y6R1 1079 aa13.06□□□□□ -0.32
PFDN5-210ENST00000550513 USP17L12C9JPN9 530 aa13.05□□□□□ -0.32
PFDN5-210ENST00000550513 USP17L21D6R901 530 aa13.05□□□□□ -0.32
PFDN5-210ENST00000550513 SMIM22K7EJ46 135 aa13.05□□□□□ -0.32
PFDN5-210ENST00000550513 CHGBP05060 677 aa13.05□□□□□ -0.32
PFDN5-210ENST00000550513 DSG3P32926 999 aa13.05□□□□□ -0.32
PFDN5-210ENST00000550513 MDM2Q00987 491 aaPredicted RBP13.05□□□□□ -0.32
PFDN5-210ENST00000550513 ARPP21Q9UBL0 812 aaPredicted RBP13.05□□□□□ -0.32
PFDN5-210ENST00000550513 KBTBD13C9JR72 458 aa13.04□□□□□ -0.32
PFDN5-210ENST00000550513 IGHA2P01877 340 aa13.04□□□□□ -0.32
PFDN5-210ENST00000550513 EEF2P13639 858 aaKnown RBP13.04□□□□□ -0.32
PFDN5-210ENST00000550513 ATN1P54259 1190 aaPredicted RBP13.04□□□□□ -0.32
PFDN5-210ENST00000550513 SIAH1Q8IUQ4 282 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms