RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 GTF3C2Q8WUA4 911 aaPredicted RBP12.39□□□□□ -0.43
BEST3-208ENST00000547208 RNF208Q9H0X6 261 aa12.39□□□□□ -0.43
BEST3-208ENST00000547208 PORCNQ9H237 461 aa12.39□□□□□ -0.43
BEST3-208ENST00000547208 RPAP3Q9H6T3 665 aaPredicted RBP12.39□□□□□ -0.43
BEST3-208ENST00000547208 EPB41L4AQ9HCS5 686 aaPredicted RBP12.39□□□□□ -0.43
BEST3-208ENST00000547208 PLXNA1Q9UIW2 1896 aa12.39□□□□□ -0.43
BEST3-208ENST00000547208 COL6A3P12111 3177 aa12.39□□□□□ -0.43
BEST3-208ENST00000547208 ROBO3Q96MS0 1386 aa12.39□□□□□ -0.43
BEST3-208ENST00000547208 SPDYE16A6NNV3 312 aaPredicted RBP12.38□□□□□ -0.43
BEST3-208ENST00000547208 GLRX3O76003 335 aaKnown RBP12.38□□□□□ -0.43
BEST3-208ENST00000547208 ZFYP08048 801 aaPredicted RBP12.38□□□□□ -0.43
BEST3-208ENST00000547208 SBK1Q52WX2 424 aa12.38□□□□□ -0.43
BEST3-208ENST00000547208 USP6NLQ92738 828 aa12.38□□□□□ -0.43
BEST3-208ENST00000547208 CCDC17Q96LX7 622 aa12.38□□□□□ -0.43
BEST3-208ENST00000547208 PAGR1Q9BTK6 254 aa12.38□□□□□ -0.43
BEST3-208ENST00000547208 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.38□□□□□ -0.43
BEST3-208ENST00000547208 PAK6Q9NQU5 681 aaPredicted RBP12.38□□□□□ -0.43
BEST3-208ENST00000547208 RBM27Q9P2N5 1060 aaKnown RBP12.38□□□□□ -0.43
BEST3-208ENST00000547208 ARPP21Q9UBL0 812 aaPredicted RBP12.38□□□□□ -0.43
BEST3-208ENST00000547208 BIN2Q9UBW5 565 aaPredicted RBP12.38□□□□□ -0.43
BEST3-208ENST00000547208 RABGAP1Q9Y3P9 1069 aa12.38□□□□□ -0.43
BEST3-208ENST00000547208 LAMA3Q16787 3333 aa12.37□□□□□ -0.43
BEST3-208ENST00000547208 ERC2O15083 957 aa12.37□□□□□ -0.43
BEST3-208ENST00000547208 GPAA1O43292 621 aa12.37□□□□□ -0.43
BEST3-208ENST00000547208 MAPK4P31152 587 aa12.37□□□□□ -0.43
BEST3-208ENST00000547208 ICA1Q05084 483 aa12.37□□□□□ -0.43
BEST3-208ENST00000547208 TRIM32Q13049 653 aa12.37□□□□□ -0.43
BEST3-208ENST00000547208 MORN1Q5T089 497 aa12.37□□□□□ -0.43
BEST3-208ENST00000547208 GIMAP6Q6P9H5 292 aa12.37□□□□□ -0.43
BEST3-208ENST00000547208 GPR142Q7Z601 462 aa12.37□□□□□ -0.43
BEST3-208ENST00000547208 NKX2-3Q8TAU0 364 aa12.37□□□□□ -0.43
BEST3-208ENST00000547208 U2AF1L4Q8WU68 220 aaKnown RBP12.37□□□□□ -0.43
BEST3-208ENST00000547208 TRIB2Q92519 343 aa12.37□□□□□ -0.43
BEST3-208ENST00000547208 DDRGK1Q96HY6 314 aa12.37□□□□□ -0.43
BEST3-208ENST00000547208 SEC62Q99442 399 aaKnown RBP12.37□□□□□ -0.43
BEST3-208ENST00000547208 BTBD7Q9P203 1132 aa12.37□□□□□ -0.43
BEST3-208ENST00000547208 TMX2Q9Y320 296 aa12.37□□□□□ -0.43
BEST3-208ENST00000547208 SGPL1O95470 568 aa12.36□□□□□ -0.43
BEST3-208ENST00000547208 HMGCRP04035 888 aa12.36□□□□□ -0.43
BEST3-208ENST00000547208 XRCC5P13010 732 aaKnown RBP12.36□□□□□ -0.43
BEST3-208ENST00000547208 MAP3K21Q5TCX8 1036 aa12.36□□□□□ -0.43
BEST3-208ENST00000547208 ANKRD45Q5TZF3 282 aa12.36□□□□□ -0.43
BEST3-208ENST00000547208 AMOTL1Q8IY63 956 aa12.36□□□□□ -0.43
BEST3-208ENST00000547208 SOCS4Q8WXH5 440 aa12.36□□□□□ -0.43
BEST3-208ENST00000547208 CRISPLD2Q9H0B8 497 aa12.36□□□□□ -0.43
BEST3-208ENST00000547208 VCPKMTQ9H867 229 aa12.36□□□□□ -0.43
BEST3-208ENST00000547208 STAP2Q9UGK3 403 aa12.36□□□□□ -0.43
BEST3-208ENST00000547208 SOX1O00570 391 aaPredicted RBP12.35□□□□□ -0.43
BEST3-208ENST00000547208 FOXP2O15409 715 aa12.35□□□□□ -0.43
BEST3-208ENST00000547208 EEF2P13639 858 aaKnown RBP12.35□□□□□ -0.43
BEST3-208ENST00000547208 GNAT2P19087 354 aa12.35□□□□□ -0.43
BEST3-208ENST00000547208 CYP2B6P20813 491 aa12.35□□□□□ -0.43
BEST3-208ENST00000547208 RASA1P20936 1047 aa12.35□□□□□ -0.43
BEST3-208ENST00000547208 COG2Q14746 738 aa12.35□□□□□ -0.43
BEST3-208ENST00000547208 ZMYM1Q5SVZ6 1142 aa12.35□□□□□ -0.43
BEST3-208ENST00000547208 LPAR1Q92633 364 aa12.35□□□□□ -0.43
BEST3-208ENST00000547208 DEFB118Q96PH6 123 aa12.35□□□□□ -0.43
BEST3-208ENST00000547208 NUDT12Q9BQG2 462 aa12.35□□□□□ -0.43
BEST3-208ENST00000547208 ARHGEF10LQ9HCE6 1279 aa12.35□□□□□ -0.43
BEST3-208ENST00000547208 LAMA4Q16363 1823 aa12.34□□□□□ -0.43
BEST3-208ENST00000547208 PATL2C9JE40 543 aaKnown RBP12.34□□□□□ -0.43
BEST3-208ENST00000547208 PDE1AP54750 535 aa12.34□□□□□ -0.43
BEST3-208ENST00000547208 AAMPQ13685 434 aa12.34□□□□□ -0.43
BEST3-208ENST00000547208 CCL14Q16627 93 aa12.34□□□□□ -0.43
BEST3-208ENST00000547208 PLEKHH3Q7Z736 793 aa12.34□□□□□ -0.43
BEST3-208ENST00000547208 SMC5Q8IY18 1101 aa12.34□□□□□ -0.43
BEST3-208ENST00000547208 IFNL3Q8IZI9 196 aa12.34□□□□□ -0.43
BEST3-208ENST00000547208 SPICE1Q8N0Z3 855 aa12.34□□□□□ -0.43
BEST3-208ENST00000547208 FSD1Q9BTV5 496 aa12.34□□□□□ -0.43
BEST3-208ENST00000547208 TANGO6Q9C0B7 1094 aa12.34□□□□□ -0.43
BEST3-208ENST00000547208 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.34□□□□□ -0.43
BEST3-208ENST00000547208 KANSL2Q9H9L4 492 aa12.34□□□□□ -0.43
BEST3-208ENST00000547208 IGKV6D-41A0A0C4DH26 115 aa12.33□□□□□ -0.44
BEST3-208ENST00000547208 MINDY4BA8MYZ0 360 aa12.33□□□□□ -0.44
BEST3-208ENST00000547208 IGHA2P01877 340 aa12.33□□□□□ -0.44
BEST3-208ENST00000547208 IGHDP01880 384 aa12.33□□□□□ -0.44
BEST3-208ENST00000547208 RGS2P41220 211 aa12.33□□□□□ -0.44
BEST3-208ENST00000547208 CCNA1P78396 465 aa12.33□□□□□ -0.44
BEST3-208ENST00000547208 LRRFIP1Q32MZ4 808 aaKnown RBP12.33□□□□□ -0.44
BEST3-208ENST00000547208 APBA2Q99767 749 aa12.33□□□□□ -0.44
BEST3-208ENST00000547208 SH2D4AQ9H788 454 aa12.33□□□□□ -0.44
BEST3-208ENST00000547208 ADAMTS5Q9UNA0 930 aa12.33□□□□□ -0.44
BEST3-208ENST00000547208 RPTORQ8N122 1335 aa12.33□□□□□ -0.44
BEST3-208ENST00000547208 PLIN4Q96Q06 1357 aa12.32□□□□□ -0.44
BEST3-208ENST00000547208 SLC15A5A6NIM6 579 aa12.32□□□□□ -0.44
BEST3-208ENST00000547208 DLL1O00548 723 aa12.32□□□□□ -0.44
BEST3-208ENST00000547208 WDR46O15213 610 aaKnown RBP12.32□□□□□ -0.44
BEST3-208ENST00000547208 FARP2O94887 1054 aaPredicted RBP12.32□□□□□ -0.44
BEST3-208ENST00000547208 PRKAR2AP13861 404 aaKnown RBP12.32□□□□□ -0.44
BEST3-208ENST00000547208 PTPREP23469 700 aa12.32□□□□□ -0.44
BEST3-208ENST00000547208 TDO2P48775 406 aa12.32□□□□□ -0.44
BEST3-208ENST00000547208 MNX1P50219 401 aaPredicted RBP12.32□□□□□ -0.44
BEST3-208ENST00000547208 MAP2K5Q13163 448 aa12.32□□□□□ -0.44
BEST3-208ENST00000547208 GRB14Q14449 540 aa12.32□□□□□ -0.44
BEST3-208ENST00000547208 STK11IPQ8N1F8 1099 aa12.32□□□□□ -0.44
BEST3-208ENST00000547208 EXOC6Q8TAG9 804 aa12.32□□□□□ -0.44
BEST3-208ENST00000547208 ATG4CQ96DT6 458 aa12.32□□□□□ -0.44
BEST3-208ENST00000547208 LRCH3Q96II8 777 aa12.32□□□□□ -0.44
BEST3-208ENST00000547208 MOV10L1Q9BXT6 1211 aaKnown RBP12.32□□□□□ -0.44
BEST3-208ENST00000547208 SPATC1LQ9H0A9 340 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms