RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 SLC9C2Q5TAH2 1124 aa14.18□□□□□ -0.14
PTCH1-212ENST00000546744 RASEFQ8IZ41 740 aa14.18□□□□□ -0.14
PTCH1-212ENST00000546744 PANX2Q96RD6 677 aa14.18□□□□□ -0.14
PTCH1-212ENST00000546744 TXNDC16Q9P2K2 825 aa14.18□□□□□ -0.14
PTCH1-212ENST00000546744 RCOR1Q9UKL0 485 aa14.18□□□□□ -0.14
PTCH1-212ENST00000546744 ARHGEF28Q8N1W1 1705 aaKnown RBP14.18□□□□□ -0.14
PTCH1-212ENST00000546744 DYNC1I2Q13409 638 aaKnown RBP14.18□□□□□ -0.14
PTCH1-212ENST00000546744 DBN1Q16643 649 aa14.18□□□□□ -0.14
PTCH1-212ENST00000546744 FBXO41Q8TF61 875 aa14.18□□□□□ -0.14
PTCH1-212ENST00000546744 RUBCNQ92622 972 aa14.18□□□□□ -0.14
PTCH1-212ENST00000546744 TYW1Q9NV66 732 aaKnown RBP14.18□□□□□ -0.14
PTCH1-212ENST00000546744 SAMD1Q6SPF0 538 aaPredicted RBP14.17□□□□□ -0.14
PTCH1-212ENST00000546744 IFNL2Q8IZJ0 200 aa14.17□□□□□ -0.14
PTCH1-212ENST00000546744 NUF2Q9BZD4 464 aa14.17□□□□□ -0.14
PTCH1-212ENST00000546744 SCOCQ9UIL1 159 aa14.17□□□□□ -0.14
PTCH1-212ENST00000546744 TRIM35Q9UPQ4 493 aa14.17□□□□□ -0.14
PTCH1-212ENST00000546744 EPB41P11171 864 aaKnown RBP14.17□□□□□ -0.14
PTCH1-212ENST00000546744 PDE4DQ08499 809 aa14.17□□□□□ -0.14
PTCH1-212ENST00000546744 AKAP4Q5JQC9 854 aa14.17□□□□□ -0.14
PTCH1-212ENST00000546744 PEX26Q7Z412 305 aa14.17□□□□□ -0.14
PTCH1-212ENST00000546744 BBOF1Q8ND07 529 aa14.17□□□□□ -0.14
PTCH1-212ENST00000546744 OTUD7AQ8TE49 926 aaPredicted RBP14.17□□□□□ -0.14
PTCH1-212ENST00000546744 APPBP2Q92624 585 aa14.17□□□□□ -0.14
PTCH1-212ENST00000546744 MAGEF1Q9HAY2 307 aa14.17□□□□□ -0.14
PTCH1-212ENST00000546744 SNRKQ9NRH2 765 aa14.17□□□□□ -0.14
PTCH1-212ENST00000546744 FAM114A2Q9NRY5 505 aa14.17□□□□□ -0.14
PTCH1-212ENST00000546744 I3L4J1 428 aa14.17□□□□□ -0.14
PTCH1-212ENST00000546744 CLTAP09496 248 aa14.17□□□□□ -0.14
PTCH1-212ENST00000546744 CYP2C19P33261 490 aa14.17□□□□□ -0.14
PTCH1-212ENST00000546744 GLE1Q53GS7 698 aaKnown RBP14.17□□□□□ -0.14
PTCH1-212ENST00000546744 KIFAP3Q92845 792 aa14.17□□□□□ -0.14
PTCH1-212ENST00000546744 DDX27Q96GQ7 796 aaKnown RBP14.17□□□□□ -0.14
PTCH1-212ENST00000546744 TRAF5O00463 557 aa14.16□□□□□ -0.14
PTCH1-212ENST00000546744 GUCY2CP25092 1073 aa14.16□□□□□ -0.14
PTCH1-212ENST00000546744 SFMBT2Q5VUG0 894 aa14.16□□□□□ -0.14
PTCH1-212ENST00000546744 KRT40Q6A162 431 aa14.16□□□□□ -0.14
PTCH1-212ENST00000546744 GSDMAQ96QA5 445 aa14.16□□□□□ -0.14
PTCH1-212ENST00000546744 JPH2Q9BR39 696 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-212ENST00000546744 OSBPL5Q9H0X9 879 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-212ENST00000546744 POLR3EQ9NVU0 708 aa14.16□□□□□ -0.14
PTCH1-212ENST00000546744 PEX19P40855 299 aa14.16□□□□□ -0.14
PTCH1-212ENST00000546744 ARID5AQ03989 594 aa14.16□□□□□ -0.14
PTCH1-212ENST00000546744 SSH3Q8TE77 659 aa14.16□□□□□ -0.14
PTCH1-212ENST00000546744 ANKRD7Q92527 254 aa14.16□□□□□ -0.14
PTCH1-212ENST00000546744 USP28Q96RU2 1077 aa14.16□□□□□ -0.14
PTCH1-212ENST00000546744 VWA3AA6NCI4 1184 aa14.16□□□□□ -0.14
PTCH1-212ENST00000546744 PPP6R2O75170 966 aa14.16□□□□□ -0.14
PTCH1-212ENST00000546744 ADKP55263 362 aaKnown RBP14.16□□□□□ -0.14
PTCH1-212ENST00000546744 IFT88Q13099 833 aa14.16□□□□□ -0.14
PTCH1-212ENST00000546744 PKP1Q13835 747 aa14.16□□□□□ -0.14
PTCH1-212ENST00000546744 EIF4A2Q14240 407 aaKnown RBP14.16□□□□□ -0.14
PTCH1-212ENST00000546744 CC2D1AQ6P1N0 951 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-212ENST00000546744 TOM1L2Q6ZVM7 507 aa14.16□□□□□ -0.14
PTCH1-212ENST00000546744 IMPG2Q9BZV3 1241 aa14.16□□□□□ -0.14
PTCH1-212ENST00000546744 TMOD2Q9NZR1 351 aa14.16□□□□□ -0.14
PTCH1-212ENST00000546744 TRMT112Q9UI30 125 aaKnown RBP14.16□□□□□ -0.14
PTCH1-212ENST00000546744 MAP3K5Q99683 1374 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 SPOPO43791 374 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 LMNAP02545 664 aaKnown RBP14.15□□□□□ -0.14
PTCH1-212ENST00000546744 TNFAIP3P21580 790 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 SDCCAG8Q86SQ7 713 aaPredicted RBP14.15□□□□□ -0.14
PTCH1-212ENST00000546744 ARMC2Q8NEN0 867 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 ORAI2Q96SN7 254 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 SPZ1Q9BXG8 430 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 SLC4A4Q9Y6R1 1079 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 MYO3AQ8NEV4 1616 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 CPA1P15085 419 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 PDE6BP35913 854 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 NAPAP54920 295 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 KLHL30Q0D2K2 578 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 CABP5Q9NP86 173 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 DDX21Q9NR30 783 aaKnown RBP eCLIP14.15□□□□□ -0.14
PTCH1-212ENST00000546744 TXLNGQ9NUQ3 528 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 TAB2Q9NYJ8 693 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 PPP1R1BQ9UD71 204 aaPredicted RBP14.15□□□□□ -0.14
PTCH1-212ENST00000546744 PFDN1O60925 122 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 IRX5P78411 483 aaPredicted RBP14.15□□□□□ -0.14
PTCH1-212ENST00000546744 LMBR1LQ6UX01 489 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 NELFBQ8WX92 580 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 HSPA6P17066 643 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 PLCB3Q01970 1234 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 MIER3Q7Z3K6 550 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 SH3GL3Q99963 347 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 AMFRQ9UKV5 643 aa14.15□□□□□ -0.14
PTCH1-212ENST00000546744 CEP170BQ9Y4F5 1589 aaPredicted RBP14.15□□□□□ -0.14
PTCH1-212ENST00000546744 MAP3K19Q56UN5 1328 aa14.15□□□□□ -0.15
PTCH1-212ENST00000546744 TTC38Q5R3I4 469 aa14.14□□□□□ -0.15
PTCH1-212ENST00000546744 ENOX1Q8TC92 643 aaKnown RBP14.14□□□□□ -0.15
PTCH1-212ENST00000546744 SEMA3EO15041 775 aa14.14□□□□□ -0.15
PTCH1-212ENST00000546744 MPRIPQ6WCQ1 1025 aa14.14□□□□□ -0.15
PTCH1-212ENST00000546744 SRLQ86TD4 932 aa14.14□□□□□ -0.15
PTCH1-212ENST00000546744 AFAP1L2Q8N4X5 818 aa14.14□□□□□ -0.15
PTCH1-212ENST00000546744 GRK7Q8WTQ7 553 aa14.14□□□□□ -0.15
PTCH1-212ENST00000546744 ZSCAN20P17040 1043 aaPredicted RBP14.14□□□□□ -0.15
PTCH1-212ENST00000546744 EEF1GP26641 437 aaKnown RBP14.14□□□□□ -0.15
PTCH1-212ENST00000546744 RFC1P35251 1148 aaPredicted RBP14.14□□□□□ -0.15
PTCH1-212ENST00000546744 NBPF6Q5VWK0 638 aa14.14□□□□□ -0.15
PTCH1-212ENST00000546744 VSTM4Q8IW00 320 aa14.14□□□□□ -0.15
PTCH1-212ENST00000546744 DTNBP1Q96EV8 351 aa14.14□□□□□ -0.15
PTCH1-212ENST00000546744 NBPF4Q96M43 638 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms