RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 C12orf60Q5U649 245 aa22.53■■□□□ 1.2
CHERP-204ENST00000546538 PARP14Q460N5 1801 aa22.53■■□□□ 1.2
CHERP-204ENST00000546538 FRMPD3Q5JV73 1810 aa22.52■■□□□ 1.2
CHERP-204ENST00000546538 PTPREP23469 700 aa22.52■■□□□ 1.2
CHERP-204ENST00000546538 TMEM179Q6ZVK1 233 aa22.52■■□□□ 1.2
CHERP-204ENST00000546538 ATP8A2Q9NTI2 1148 aa22.52■■□□□ 1.2
CHERP-204ENST00000546538 USP17L12C9JPN9 530 aa22.51■■□□□ 1.19
CHERP-204ENST00000546538 USP17L21D6R901 530 aa22.51■■□□□ 1.19
CHERP-204ENST00000546538 GRB14Q14449 540 aa22.51■■□□□ 1.19
CHERP-204ENST00000546538 TSHZ3Q63HK5 1081 aa22.51■■□□□ 1.19
CHERP-204ENST00000546538 NPLOC4Q8TAT6 608 aa22.51■■□□□ 1.19
CHERP-204ENST00000546538 CHMP4BQ9H444 224 aaKnown RBP22.51■■□□□ 1.19
CHERP-204ENST00000546538 SWAP70Q9UH65 585 aa22.51■■□□□ 1.19
CHERP-204ENST00000546538 CDK8P49336 464 aa22.5■■□□□ 1.19
CHERP-204ENST00000546538 CCAR1Q8IX12 1150 aaKnown RBP22.5■■□□□ 1.19
CHERP-204ENST00000546538 TRMT44Q8IYL2 757 aaKnown RBP22.5■■□□□ 1.19
CHERP-204ENST00000546538 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.5■■□□□ 1.198e-8■■■□□ 15.7
CHERP-204ENST00000546538 NBPF3Q9H094 633 aa22.5■■□□□ 1.19
CHERP-204ENST00000546538 SLC15A5A6NIM6 579 aa22.49■■□□□ 1.19
CHERP-204ENST00000546538 HOXC6P09630 235 aa22.49■■□□□ 1.19
CHERP-204ENST00000546538 COL6A1P12109 1028 aa22.49■■□□□ 1.19
CHERP-204ENST00000546538 CCNA1P78396 465 aa22.49■■□□□ 1.19
CHERP-204ENST00000546538 C16orf86Q6ZW13 317 aa22.49■■□□□ 1.19
CHERP-204ENST00000546538 MOV10L1Q9BXT6 1211 aaKnown RBP22.49■■□□□ 1.19
CHERP-204ENST00000546538 C11orf49Q9H6J7 331 aa22.49■■□□□ 1.19
CHERP-204ENST00000546538 STAP2Q9UGK3 403 aa22.49■■□□□ 1.19
CHERP-204ENST00000546538 COG2Q14746 738 aa22.48■■□□□ 1.19
CHERP-204ENST00000546538 WDR78Q5VTH9 848 aa22.48■■□□□ 1.19
CHERP-204ENST00000546538 CTR9Q6PD62 1173 aa22.48■■□□□ 1.19
CHERP-204ENST00000546538 C7orf61Q8IZ16 206 aa22.48■■□□□ 1.19
CHERP-204ENST00000546538 SPICE1Q8N0Z3 855 aa22.48■■□□□ 1.19
CHERP-204ENST00000546538 TRPV1Q8NER1 839 aa22.48■■□□□ 1.19
CHERP-204ENST00000546538 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.48■■□□□ 1.19
CHERP-204ENST00000546538 DCTPP1Q9H773 170 aa22.48■■□□□ 1.19
CHERP-204ENST00000546538 TMX2Q9Y320 296 aa22.48■■□□□ 1.19
CHERP-204ENST00000546538 SLC4A4Q9Y6R1 1079 aa22.48■■□□□ 1.19
CHERP-204ENST00000546538 ZNF236Q9UL36 1845 aa22.48■■□□□ 1.19
CHERP-204ENST00000546538 GREB1LQ9C091 1923 aaPredicted RBP22.48■■□□□ 1.19
CHERP-204ENST00000546538 COL6A3P12111 3177 aa22.48■■□□□ 1.19
CHERP-204ENST00000546538 ICA1Q05084 483 aa22.48■■□□□ 1.19
CHERP-204ENST00000546538 TANGO6Q9C0B7 1094 aa22.48■■□□□ 1.19
CHERP-204ENST00000546538 ECHDC1Q9NTX5 307 aa22.48■■□□□ 1.19
CHERP-204ENST00000546538 LAMA2P24043 3122 aaKnown RBP22.47■■□□□ 1.19
CHERP-204ENST00000546538 SOX1O00570 391 aaPredicted RBP22.47■■□□□ 1.19
CHERP-204ENST00000546538 STRBPQ96SI9 672 aaKnown RBP22.47■■□□□ 1.19
CHERP-204ENST00000546538 SPATC1LQ9H0A9 340 aa22.47■■□□□ 1.19
CHERP-204ENST00000546538 VCPKMTQ9H867 229 aa22.47■■□□□ 1.19
CHERP-204ENST00000546538 ZMYND8Q9ULU4 1186 aaPredicted RBP22.47■■□□□ 1.19
CHERP-204ENST00000546538 DSG3P32926 999 aa22.46■■□□□ 1.19
CHERP-204ENST00000546538 CYP2C19P33261 490 aa22.46■■□□□ 1.19
CHERP-204ENST00000546538 OSBP2Q969R2 916 aa22.46■■□□□ 1.19
CHERP-204ENST00000546538 ATG4CQ96DT6 458 aa22.46■■□□□ 1.19
CHERP-204ENST00000546538 GDF15Q99988 308 aa22.46■■□□□ 1.19
CHERP-204ENST00000546538 HOXC10Q9NYD6 342 aa22.46■■□□□ 1.19
CHERP-204ENST00000546538 EEF2P13639 858 aaKnown RBP22.45■■□□□ 1.18
CHERP-204ENST00000546538 LPAR1Q92633 364 aa22.45■■□□□ 1.18
CHERP-204ENST00000546538 CWC22Q9HCG8 908 aaKnown RBP22.45■■□□□ 1.18
CHERP-204ENST00000546538 COL11A1P12107 1806 aaPredicted RBP22.45■■□□□ 1.18
CHERP-204ENST00000546538 GSG1L2A8MUP6 293 aa22.44■■□□□ 1.18
CHERP-204ENST00000546538 COBLO75128 1261 aa22.44■■□□□ 1.18
CHERP-204ENST00000546538 GLRX3O76003 335 aaKnown RBP22.44■■□□□ 1.18
CHERP-204ENST00000546538 SYN1P17600 705 aa22.44■■□□□ 1.18
CHERP-204ENST00000546538 ERCC3P19447 782 aa22.44■■□□□ 1.18
CHERP-204ENST00000546538 ADORA2AP29274 412 aa22.44■■□□□ 1.18
CHERP-204ENST00000546538 KBTBD3Q8NAB2 608 aa22.44■■□□□ 1.18
CHERP-204ENST00000546538 CCDC17Q96LX7 622 aa22.44■■□□□ 1.18
CHERP-204ENST00000546538 FBXO28Q9NVF7 368 aa22.44■■□□□ 1.18
CHERP-204ENST00000546538 PCDHB15Q9Y5E8 787 aa22.44■■□□□ 1.18
CHERP-204ENST00000546538 FLOT1O75955 427 aa22.43■■□□□ 1.18
CHERP-204ENST00000546538 LRRC26Q2I0M4 334 aa22.43■■□□□ 1.18
CHERP-204ENST00000546538 ARHGEF10LQ9HCE6 1279 aa22.43■■□□□ 1.18
CHERP-204ENST00000546538 EPB41L4AQ9HCS5 686 aaPredicted RBP22.43■■□□□ 1.18
CHERP-204ENST00000546538 IVNS1ABPQ9Y6Y0 642 aa22.43■■□□□ 1.18
CHERP-204ENST00000546538 CYBAP13498 195 aa22.42■■□□□ 1.18
CHERP-204ENST00000546538 MFSD14CQ5VZR4 134 aa22.42■■□□□ 1.18
CHERP-204ENST00000546538 SHCBP1Q8NEM2 672 aa22.42■■□□□ 1.18
CHERP-204ENST00000546538 OTUD7AQ8TE49 926 aaPredicted RBP22.42■■□□□ 1.18
CHERP-204ENST00000546538 ADAMTS5Q9UNA0 930 aa22.42■■□□□ 1.18
CHERP-204ENST00000546538 WDR46O15213 610 aaKnown RBP22.41■■□□□ 1.18
CHERP-204ENST00000546538 ATP2B2Q01814 1243 aa22.41■■□□□ 1.18
CHERP-204ENST00000546538 TMEM132BQ14DG7 1078 aa22.41■■□□□ 1.18
CHERP-204ENST00000546538 ZSCAN25Q6NSZ9 544 aa22.41■■□□□ 1.18
CHERP-204ENST00000546538 DDX20Q9UHI6 824 aaKnown RBP22.41■■□□□ 1.18
CHERP-204ENST00000546538 A0A1W2PPC1 479 aa22.4■■□□□ 1.18
CHERP-204ENST00000546538 M0R2C6 588 aa22.4■■□□□ 1.18
CHERP-204ENST00000546538 RASA1P20936 1047 aa22.4■■□□□ 1.18
CHERP-204ENST00000546538 SBK1Q52WX2 424 aa22.4■■□□□ 1.18
CHERP-204ENST00000546538 MB21D1Q8N884 522 aa22.4■■□□□ 1.18
CHERP-204ENST00000546538 LRCH3Q96II8 777 aa22.4■■□□□ 1.18
CHERP-204ENST00000546538 ARPP21Q9UBL0 812 aaPredicted RBP22.4■■□□□ 1.18
CHERP-204ENST00000546538 ROBO3Q96MS0 1386 aa22.4■■□□□ 1.18
CHERP-204ENST00000546538 BMP8BP34820 402 aa22.4■■□□□ 1.18
CHERP-204ENST00000546538 MAGEA10P43363 369 aaPredicted RBP22.4■■□□□ 1.18
CHERP-204ENST00000546538 OLFML2BQ68BL8 750 aa22.4■■□□□ 1.18
CHERP-204ENST00000546538 STK11IPQ8N1F8 1099 aa22.4■■□□□ 1.18
CHERP-204ENST00000546538 REPS2Q8NFH8 660 aa22.4■■□□□ 1.18
CHERP-204ENST00000546538 PI4K2BQ8TCG2 481 aa22.4■■□□□ 1.18
CHERP-204ENST00000546538 APPBP2Q92624 585 aa22.4■■□□□ 1.18
CHERP-204ENST00000546538 KANSL2Q9H9L4 492 aa22.4■■□□□ 1.18
CHERP-204ENST00000546538 ZNFX1Q9P2E3 1918 aaKnown RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms