RNA–Protein interactions for RNA: ENST00000545720.6

RAP1B-233, Transcript of RAP1B, member of RAS oncogene family, human

TSL 5

Gene RAP1B, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-233	ENST00000545720	PTPRE	P23469	700 aa		28.69	■■■□□ 2.18
RAP1B-233	ENST00000545720	TMEM179	Q6ZVK1	233 aa		28.69	■■■□□ 2.18
RAP1B-233	ENST00000545720	TANGO6	Q9C0B7	1094 aa		28.69	■■■□□ 2.18
RAP1B-233	ENST00000545720	SWAP70	Q9UH65	585 aa		28.69	■■■□□ 2.18
RAP1B-233	ENST00000545720	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	28.69	■■■□□ 2.18
RAP1B-233	ENST00000545720	SLC15A5	A6NIM6	579 aa		28.68	■■■□□ 2.18
RAP1B-233	ENST00000545720	CHGB	P05060	677 aa		28.68	■■■□□ 2.18
RAP1B-233	ENST00000545720	C20orf194	Q5TEA3	1177 aa		28.68	■■■□□ 2.18
RAP1B-233	ENST00000545720	CLEC10A	Q8IUN9	316 aa		28.68	■■■□□ 2.18
RAP1B-233	ENST00000545720	ATP8A2	Q9NTI2	1148 aa		28.68	■■■□□ 2.18
RAP1B-233	ENST00000545720	FLRT1	Q9NZU1	646 aa		28.68	■■■□□ 2.18
RAP1B-233	ENST00000545720	PFAS	O15067	1338 aa		28.68	■■■□□ 2.18
RAP1B-233	ENST00000545720	CYP2D7	A0A087X1C5	515 aa		28.66	■■■□□ 2.18
RAP1B-233	ENST00000545720		A0A1W2PPC1	479 aa		28.66	■■■□□ 2.18
RAP1B-233	ENST00000545720	AKR1B1	P15121	316 aa		28.66	■■■□□ 2.18
RAP1B-233	ENST00000545720	GRB14	Q14449	540 aa		28.66	■■■□□ 2.18
RAP1B-233	ENST00000545720	COG2	Q14746	738 aa		28.66	■■■□□ 2.18
RAP1B-233	ENST00000545720	MFSD14C	Q5VZR4	134 aa		28.66	■■■□□ 2.18
RAP1B-233	ENST00000545720	LHX8	Q68G74	356 aa		28.66	■■■□□ 2.18
RAP1B-233	ENST00000545720	LRRCC1	Q9C099	1032 aa		28.66	■■■□□ 2.18
RAP1B-233	ENST00000545720	LAMA3	Q16787	3333 aa		28.66	■■■□□ 2.18
RAP1B-233	ENST00000545720	DNAH12	Q6ZR08	3092 aa		28.66	■■■□□ 2.18
RAP1B-233	ENST00000545720	SMIM22	K7EJ46	135 aa		28.65	■■■□□ 2.18
RAP1B-233	ENST00000545720	SMARCA5	O60264	1052 aa	Predicted RBP	28.65	■■■□□ 2.18
RAP1B-233	ENST00000545720	KIAA1755	Q5JYT7	1200 aa		28.65	■■■□□ 2.18
RAP1B-233	ENST00000545720	SYN1	P17600	705 aa		28.64	■■■□□ 2.18
RAP1B-233	ENST00000545720	ICA1	Q05084	483 aa		28.64	■■■□□ 2.18
RAP1B-233	ENST00000545720	AMOTL1	Q8IY63	956 aa		28.64	■■■□□ 2.18
RAP1B-233	ENST00000545720	NPLOC4	Q8TAT6	608 aa		28.64	■■■□□ 2.18
RAP1B-233	ENST00000545720	ARHGEF10L	Q9HCE6	1279 aa		28.64	■■■□□ 2.18
RAP1B-233	ENST00000545720	HOXC10	Q9NYD6	342 aa		28.64	■■■□□ 2.18
RAP1B-233	ENST00000545720	HOXC6	P09630	235 aa		28.63	■■■□□ 2.17
RAP1B-233	ENST00000545720	ATP2B2	Q01814	1243 aa		28.63	■■■□□ 2.17
RAP1B-233	ENST00000545720	UBE3C	Q15386	1083 aa		28.63	■■■□□ 2.17
RAP1B-233	ENST00000545720	C12orf60	Q5U649	245 aa		28.63	■■■□□ 2.17
RAP1B-233	ENST00000545720	SPICE1	Q8N0Z3	855 aa		28.63	■■■□□ 2.17
RAP1B-233	ENST00000545720	MOV10L1	Q9BXT6	1211 aa	Known RBP	28.63	■■■□□ 2.17
RAP1B-233	ENST00000545720	USP17L12	C9JPN9	530 aa		28.62	■■■□□ 2.17
RAP1B-233	ENST00000545720	USP17L21	D6R901	530 aa		28.62	■■■□□ 2.17
RAP1B-233	ENST00000545720	COL6A1	P12109	1028 aa		28.62	■■■□□ 2.17
RAP1B-233	ENST00000545720	CDK8	P49336	464 aa		28.62	■■■□□ 2.17
RAP1B-233	ENST00000545720	LPAR1	Q92633	364 aa		28.62	■■■□□ 2.17
RAP1B-233	ENST00000545720	DDRGK1	Q96HY6	314 aa		28.62	■■■□□ 2.17
RAP1B-233	ENST00000545720	GDF15	Q99988	308 aa		28.62	■■■□□ 2.17
RAP1B-233	ENST00000545720	SPATC1L	Q9H0A9	340 aa		28.62	■■■□□ 2.17
RAP1B-233	ENST00000545720	SLC4A4	Q9Y6R1	1079 aa		28.62	■■■□□ 2.17
RAP1B-233	ENST00000545720	PLXNA1	Q9UIW2	1896 aa		28.61	■■■□□ 2.17
RAP1B-233	ENST00000545720	GREB1L	Q9C091	1923 aa	Predicted RBP	28.61	■■■□□ 2.17
RAP1B-233	ENST00000545720	SIAH1	Q8IUQ4	282 aa		28.61	■■■□□ 2.17
RAP1B-233	ENST00000545720	SH2D4A	Q9H788	454 aa		28.61	■■■□□ 2.17
RAP1B-233	ENST00000545720	TMX2	Q9Y320	296 aa		28.61	■■■□□ 2.17
RAP1B-233	ENST00000545720	SOX1	O00570	391 aa	Predicted RBP	28.6	■■■□□ 2.17
RAP1B-233	ENST00000545720	FLOT1	O75955	427 aa		28.6	■■■□□ 2.17
RAP1B-233	ENST00000545720	CNGA1	P29973	690 aa		28.6	■■■□□ 2.17
RAP1B-233	ENST00000545720	CYP2C19	P33261	490 aa		28.6	■■■□□ 2.17
RAP1B-233	ENST00000545720	SAMD1	Q6SPF0	538 aa	Predicted RBP	28.6	■■■□□ 2.17
RAP1B-233	ENST00000545720	C16orf86	Q6ZW13	317 aa		28.6	■■■□□ 2.17
RAP1B-233	ENST00000545720	CCDC17	Q96LX7	622 aa		28.6	■■■□□ 2.17
RAP1B-233	ENST00000545720	PUS7L	Q9H0K6	701 aa	Known RBP	28.6	■■■□□ 2.17
RAP1B-233	ENST00000545720	MYH4	Q9Y623	1939 aa		28.6	■■■□□ 2.17
RAP1B-233	ENST00000545720	ERCC3	P19447	782 aa		28.59	■■■□□ 2.17
RAP1B-233	ENST00000545720	ADORA2A	P29274	412 aa		28.59	■■■□□ 2.17
RAP1B-233	ENST00000545720	PLS1	Q14651	629 aa		28.59	■■■□□ 2.17
RAP1B-233	ENST00000545720	ZSCAN25	Q6NSZ9	544 aa		28.59	■■■□□ 2.17
RAP1B-233	ENST00000545720	DPP9	Q86TI2	863 aa		28.59	■■■□□ 2.17
RAP1B-233	ENST00000545720	VCPKMT	Q9H867	229 aa		28.59	■■■□□ 2.17
RAP1B-233	ENST00000545720	DDX20	Q9UHI6	824 aa	Known RBP	28.59	■■■□□ 2.17
RAP1B-233	ENST00000545720	DSG3	P32926	999 aa		28.58	■■■□□ 2.17
RAP1B-233	ENST00000545720	BMP8B	P34820	402 aa		28.58	■■■□□ 2.17
RAP1B-233	ENST00000545720	LRRC26	Q2I0M4	334 aa		28.58	■■■□□ 2.17
RAP1B-233	ENST00000545720	MB21D1	Q8N884	522 aa		28.58	■■■□□ 2.17
RAP1B-233	ENST00000545720	SHCBP1	Q8NEM2	672 aa		28.58	■■■□□ 2.17
RAP1B-233	ENST00000545720	ATG4C	Q96DT6	458 aa		28.58	■■■□□ 2.17
RAP1B-233	ENST00000545720	LRCH3	Q96II8	777 aa		28.58	■■■□□ 2.17
RAP1B-233	ENST00000545720	MAGEA10	P43363	369 aa	Predicted RBP	28.57	■■■□□ 2.16
RAP1B-233	ENST00000545720	CTR9	Q6PD62	1173 aa		28.57	■■■□□ 2.16
RAP1B-233	ENST00000545720	TRPV1	Q8NER1	839 aa		28.57	■■■□□ 2.16
RAP1B-233	ENST00000545720	ECHDC1	Q9NTX5	307 aa		28.57	■■■□□ 2.16
RAP1B-233	ENST00000545720	SMCHD1	A6NHR9	2005 aa		28.57	■■■□□ 2.16
RAP1B-233	ENST00000545720	WDR46	O15213	610 aa	Known RBP	28.56	■■■□□ 2.16
RAP1B-233	ENST00000545720	STRN	O43815	780 aa		28.56	■■■□□ 2.16
RAP1B-233	ENST00000545720	MSC	O60682	206 aa		28.56	■■■□□ 2.16
RAP1B-233	ENST00000545720	NCAPG2	Q86XI2	1143 aa		28.56	■■■□□ 2.16
RAP1B-233	ENST00000545720	CYBA	P13498	195 aa		28.55	■■■□□ 2.16
RAP1B-233	ENST00000545720	EEF2	P13639	858 aa	Known RBP	28.55	■■■□□ 2.16
RAP1B-233	ENST00000545720	IGHA2	P01877	340 aa		28.54	■■■□□ 2.16
RAP1B-233	ENST00000545720	OLFML2B	Q68BL8	750 aa		28.54	■■■□□ 2.16
RAP1B-233	ENST00000545720	SENP6	Q9GZR1	1112 aa	Predicted RBP	28.54	■■■□□ 2.16
RAP1B-233	ENST00000545720	MROH8	Q9H579	483 aa		28.54	■■■□□ 2.16
RAP1B-233	ENST00000545720	KANSL2	Q9H9L4	492 aa		28.54	■■■□□ 2.16
RAP1B-233	ENST00000545720	ARPP21	Q9UBL0	812 aa	Predicted RBP	28.54	■■■□□ 2.16
RAP1B-233	ENST00000545720	COBL	O75128	1261 aa		28.53	■■■□□ 2.16
RAP1B-233	ENST00000545720	TSHZ3	Q63HK5	1081 aa		28.53	■■■□□ 2.16
RAP1B-233	ENST00000545720	RAD21	O60216	631 aa		28.52	■■■□□ 2.16
RAP1B-233	ENST00000545720	GPATCH3	Q96I76	525 aa		28.52	■■■□□ 2.16
RAP1B-233	ENST00000545720	STRBP	Q96SI9	672 aa	Known RBP	28.52	■■■□□ 2.16
RAP1B-233	ENST00000545720	FBXO28	Q9NVF7	368 aa		28.52	■■■□□ 2.16
RAP1B-233	ENST00000545720	TMEM132B	Q14DG7	1078 aa		28.51	■■■□□ 2.15
RAP1B-233	ENST00000545720	STK11IP	Q8N1F8	1099 aa		28.51	■■■□□ 2.15
RAP1B-233	ENST00000545720	KBTBD3	Q8NAB2	608 aa		28.51	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms